Lysobacter luteus: LYB30171_02231
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Entry
LYB30171_02231 CDS
T08395
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
llz
Lysobacter luteus
Pathway
llz00470
D-Amino acid metabolism
llz00550
Peptidoglycan biosynthesis
llz01100
Metabolic pathways
llz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
llz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LYB30171_02231 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LYB30171_02231 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LYB30171_02231 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
llz01011
]
LYB30171_02231 (ddlB)
Enzymes [BR:
llz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LYB30171_02231 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
llz01011
]
Precursor biosynthesis
Amino acid ligase
LYB30171_02231 (ddlB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp
ATP-grasp_3
GARS_A
Motif
Other DBs
NCBI-ProteinID:
CAG4976618
LinkDB
All DBs
Position
1:complement(2378800..2379783)
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AA seq
327 aa
AA seq
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MSAAFTPPRFTDPAVFGRVAVLMGGTSAEREVSLDSGRNVLEALQARGVDAVAVDGIPAL
VDAVRAGSVDRVFNILHGNKGGGEDGVLQGLLDALGVPYTGSGVLGSALSMDKIRTKQVW
LSLDLPTPRYVRLPKGSDVHDAARVIGLPLIIKPSCEGSSVGVSRVHDEAGLDDAVALAA
RYPGELLMEQLVVGDELTVAVLADGDGHRALPSIRIVPKGEWYDYNAKYVAEDTQYLCPG
LDGAAEDEIRRIALLAFEAAGCSGWGRVDVMRDRATGDFFLLEVNTAPGMTSHSLVPKAA
RELGIDFGELCWRVLESSLADDGGAHA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccttcaccccgccgcggttcacggatcccgccgtgttcggccgcgtcgcg
gtactgatgggcggcaccagcgccgagcgcgaggtttcgctggattccggtcgcaacgtg
ctggaggcgctgcaggctcgcggcgtcgacgcggtggcggtcgacggcatcccggcgctg
gtcgatgcggttcgcgccggctcggtcgaccgcgtcttcaacatcctccacggcaacaag
ggcggtggcgaggacggcgtgctgcaggggctgctggacgcgctcggcgtgccgtacacc
ggctcgggcgtgctcggctcggcgctgagcatggacaagatccgcaccaagcaggtctgg
ctgtcgctcgacctgccgacaccgcgctacgtgcgactgccgaaggggtcggacgtgcac
gacgcggcccgcgtgatcgggcttccgttgatcatcaagccgtcctgcgaaggttccagc
gtcggtgtctcgcgggtgcatgacgaggccggcctggacgacgccgtcgcgctggccgcg
cgctaccccggtgagctgctgatggagcagctggtggtcggcgacgaactcaccgtcgcg
gtgctcgccgacggcgatggccaccgcgcgctgccctcgatccggatcgtgccgaagggc
gagtggtacgactacaacgccaagtacgtcgccgaggacacccaatacctgtgcccgggc
ctggacggcgccgccgaggacgagatccgccgcatcgcgctgctggccttcgaggccgcc
gggtgcagcggctggggccgggtcgacgtgatgcgcgaccgggcgaccggcgacttcttc
ctgctcgaggtcaacaccgcgccggggatgaccagccactcgctggtgcccaaggccgcg
cgcgaactcggcatcgatttcggcgagctgtgctggcgggtgctcgagtcgagcctggcg
gacgacggaggtgcacacgcgtga
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