KEGG   Leishmania major: LMJF_30_3440
Entry
LMJF_30_3440      CDS       T01014                                 
Name
(RefSeq) putative DNA ligase I
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
lma  Leishmania major
Pathway
lma03030  DNA replication
lma03410  Base excision repair
lma03420  Nucleotide excision repair
lma03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LMJF_30_3440
   03410 Base excision repair
    LMJF_30_3440
   03420 Nucleotide excision repair
    LMJF_30_3440
   03430 Mismatch repair
    LMJF_30_3440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lma03032]
    LMJF_30_3440
   03400 DNA repair and recombination proteins [BR:lma03400]
    LMJF_30_3440
Enzymes [BR:lma01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LMJF_30_3440
    6.5.1.6  DNA ligase (ATP or NAD+)
     LMJF_30_3440
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     LMJF_30_3440
DNA replication proteins [BR:lma03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LMJF_30_3440
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     LMJF_30_3440
DNA repair and recombination proteins [BR:lma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LMJF_30_3440
   NER (nucleotide excision repair)
    Other NER factors
     LMJF_30_3440
   MMR (mismatch excision repair)
    Other MMR factors
     LMJF_30_3440
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 5653894
NCBI-ProteinID: XP_001684953
UniProt: Q4Q6U5
LinkDB
Position
30:1310400..1312445
AA seq 681 aa
MALVADVPPPTATSMAKLFQESSFDPVTTFEAVWLPPRVPAAPPTAGASEPVPFAAVVDV
LADISATGSRLECLKQLTFLLLAVIERCPEDLVPVMYLVINKHAPQHEGVELGIGDAVLV
KAVAECCGMTETRAKEEYRQSGDLAEIAQMHKQKQGTLMKPKPLSARSVFKTYKEIAMMS
GRDVMRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVGYAFALHFLGGA
QMHKMDEVQLQTLLNTGADSLARIFYEVPSLDVVLSAVLANGFMTLVPGSSIAKQYAKDL
SIRPGLPVKPQLAYPTSSITVILDRLQGKKFTSEYKYDGERAQIHYDKDKGFHIFSRNSE
THTGKYPDVISMLPKVFDPVEVQSFILDSEVVAVHSETGALQAFQVLQHRGRKNIAEEDV
SIPVCVFVFDILYFNGEPQLNKTLQQRRELLWRCIHPLPAKLSFATHLDSEKVEDVQTFL
ERSIADGCEGLMVKTLEEEANYTPAKRSHYWLKLKKDYMDGVTDTLDLVPIAAFYGKGKR
TGVFGGFLLACYDPKADEYQSICKIGTGFQDEELEKLTQSLKPFVVDEKPRYYRAGGEEP
DVWLTEAQVWEVKAADLSVSPVHQAAVGLVDPDKGIALRFPRYLRQREDKKPADATNARQ
VADMYKAQSLAAEHDANGDAE
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggcgctggtcgccgatgtgccgccgccgacggcgacgtccatggcgaagctcttccag
gagtcctccttcgatcctgtgacgacgttcgaggcagtatggttgcctccccgggttcct
gccgcgccgcctaccgctggtgcatcggagccggtgccgtttgcggcagtagtggacgtg
ctggcagacatcagcgccaccggctcgcggcttgagtgcttgaagcagcttacctttctg
ctgcttgctgttatcgagcggtgcccagaggacttggtgccggtgatgtacctggtgatc
aacaagcatgcgccgcagcacgagggcgtggagctaggcatcggtgatgcggtgctggtg
aaggcggtggccgagtgctgcggcatgacggagacgcgagccaaagaggagtaccggcag
agcggcgatttggcggaaatcgcgcagatgcataagcagaagcaaggtacgctcatgaaa
ccgaagccgctctccgctcggagcgtgttcaagacatacaaggagatcgctatgatgagc
ggcagggatgtgatgcggcggcggtcggacttgatcaaggggcttttgcgcgacgcacag
ggcccggaggtgaacttgattgtgcgtgggcttcagcagaagatgcgcattggccttgcc
gagccatccgccttggcagctgtggggtacgccttcgctcttcacttcctcggtggcgcg
caaatgcacaagatggacgaggtgcagctgcagacgctgcttaataccggcgccgacagt
ctcgcgcgtatcttctacgaggttccaagtctcgacgtggttctgagcgcggtgcttgcg
aacggcttcatgaccttggtgccgggtagctccatcgcgaagcagtatgcaaaggacttg
tccattcggcctgggctgccggtgaagccccagttagcgtacccgacgagcagtatcacc
gtcatcctggaccgcctgcagggcaagaagttcacgtcggagtacaagtacgacggtgag
cgcgcgcagatccactatgacaaagacaaaggcttccatatcttttcccgcaactccgag
actcacaccggcaaatacccggacgtcatttcgatgctgccaaaagtctttgatccagtc
gaagtgcagtctttcatcctcgactcggaggttgtggcggtgcattcggagaccggtgcc
cttcaggccttccaagtgctgcagcatcgtggccgaaagaacattgcagaggaggatgtc
agcattcccgtctgcgtgtttgtgtttgacatcctgtacttcaacggagagccgcagctg
aataagacactgcagcagcgtcgcgagctgctgtggcggtgcatccatcccctcccggca
aagctgtcgtttgccacgcacttggattcggagaaggtcgaggacgtgcaaacgtttttg
gagaggtccatcgcggacggctgcgaaggattaatggtgaagacgctcgaggaggaagcc
aactacacccccgccaagcgctcgcactactggctgaagctgaagaaggactacatggac
ggcgtcaccgatacgctggatcttgtccccatcgccgctttctacggcaagggcaagcga
actggcgtgtttggcggcttcctgctggcgtgctacgacccgaaggcggatgagtaccag
agcatctgcaaaatcggcaccggcttccaggacgaagagctggagaagctcacgcagtcc
cttaagccgttcgtggtggacgaaaagccgcgctactaccgcgcgggtggggaggaaccg
gatgtttggctcaccgaggcgcaggtgtgggaggtgaaggcggcggacctgtcagtgtcg
ccagttcatcaggcagccgtggggctcgtggaccccgacaagggcatcgcgctgcgcttt
cctcgctacctgcgccagcgcgaggacaagaaacccgcagacgccacaaacgcacggcag
gtggcggacatgtacaaagcgcagtccttagcagccgaacacgacgcgaacggggacgcc
gagtga

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