Leisingera methylohalidivorans: METH_08920
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Entry
METH_08920 CDS
T02961
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
METH_08920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_08920
Enzymes [BR:
lmd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
METH_08920
DNA repair and recombination proteins [BR:
lmd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
METH_08920
Prokaryotic type
METH_08920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHD00783
UniProt:
V9VS13
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All DBs
Position
1715564..1716217
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AA seq
217 aa
AA seq
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MTRLPAGLGAWSSLPFFTGHWPGLSAAIAGDPREILPPAHLRFAALELTQPQHTRVVILG
QDPYPTPGHAHGLAFSAEPHVHPLPRSLSNIYKELEDDLGVTRPNADLRGWASQGVLLLN
TALTVPAGEANGHKHLGWQYLVHQVLDRTSERPTAYILWGNAAQKLEKHIKPGDHLILKT
AHPSPLSARRGFFGSRPFSKVNNWLAARGESGIDWNA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcttgccagcggggctgggcgcctggtccagcctgccttttttcaccggccat
tggcccggactctcagccgcaattgccggggatccgcgcgaaatccttccgcccgcgcat
ctgcggtttgccgcactggaactgacccagccgcagcacacccgcgtggtgatcctgggc
caggatccttatccgacgccgggtcacgcccatggcctggccttttccgctgaaccgcat
gtccacccgcttccgcgctctttgtctaacatttacaaagagctggaagacgatcttggc
gtaacccgcccaaatgcagacctgcgtggatgggcaagccagggcgttctgctcctgaac
accgcccttaccgtgcccgcaggcgaggcgaacggccacaagcacctgggctggcagtat
ctggtgcatcaggtgctggaccggacctcagaacgccccacggcttacattctatgggga
aatgcagcacaaaagcttgaaaaacatatcaaaccgggcgatcacctgatcctgaaaact
gcccatccctcgcccctgtcggcgcggcgcggcttcttcgggtcccggcccttttcaaaa
gtgaataattggctcgctgcccgcggtgaaagcggcatagactggaacgcataa
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