Leisingera methylohalidivorans: METH_12500
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Entry
METH_12500 CDS
T02961
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd00470
D-Amino acid metabolism
lmd00550
Peptidoglycan biosynthesis
lmd01100
Metabolic pathways
lmd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
METH_12500
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
METH_12500
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
METH_12500
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lmd01011
]
METH_12500
Enzymes [BR:
lmd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
METH_12500
Peptidoglycan biosynthesis and degradation proteins [BR:
lmd01011
]
Precursor biosynthesis
Amino acid ligase
METH_12500
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AHD01391
UniProt:
V9VRM3
LinkDB
All DBs
Position
complement(2404261..2405181)
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AA seq
306 aa
AA seq
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MSKSSRALPKVAVLMGGPSAEREVSLSSGRECAAALRGEGFEVVEVDAGRDLYARLADIK
PDVAFNALHGRWGEDGCVQGVLEWLGIPYTHSGVLASALAMDKQRSKEVYRAAGLPVVES
GLFAKDEVGAGHVMAPPYVVKPNNEGSSVGIYIVQEAANGPPQLSEEMPSEVMVETYAPG
RELTTTVVGDKALTVTDILTDGWYDYDAKYKPGGSRHVLPADLPREIHDLCLDYALKAHE
VLGCRGVSRTDFRWDEARGAGGLILLETNTQPGMTPTSLVPEQAAFCGMDFGELCAWMVE
DASCNR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagtcgagcagggcactcccgaaagtcgcggtgctgatgggcggaccgtcagcc
gaacgcgaagtatcgctgtccagcggccgtgaatgcgcggccgctttgcgcggtgagggg
tttgaggttgtcgaggtggatgcaggccgggacctgtacgcgcgcctggcggatatcaag
ccggatgtggcgtttaacgcgctgcacgggcgctggggcgaggacggctgtgtgcagggt
gtgctggaatggctgggcatcccctatacccattccggggtgctggcctcggcgctggcg
atggacaagcagcgctccaaggaagtgtaccgcgccgccgggctgccggttgtcgaaagc
ggcttgtttgccaaggatgaggtcggcgcaggccatgtgatggcgccgccttatgtggtg
aagcctaacaatgaaggctccagcgtcggcatttatattgtgcaggaggctgccaacggc
ccgccgcagttgtcggaagaaatgccgtccgaggtgatggtcgaaacctatgcgccgggg
cgcgagctgaccaccaccgtggtcggggacaaggcgctgacggtgaccgatatcctgacc
gatggctggtatgattatgacgccaaatacaagcccggcggctcgcgccatgtgctgccc
gcggacctgccgcgggaaattcatgacctgtgcctggactatgcgctgaaggcgcatgag
gtgctgggctgccgcggtgtcagccgcaccgatttccgctgggacgaggcgcgcggcgcg
ggcgggctgatcctgctggagaccaatacccagccggggatgactccgacctcgctggtg
ccggagcaggcggccttctgcggcatggattttggcgagttgtgcgcctggatggtggag
gatgcctcatgcaaccgctga
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