KEGG   Leishmania mexicana: LMXM_21_0680
Entry
LMXM_21_0680      CDS       T02288                                 
Name
(RefSeq) putative histone deacetylase
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
lmi  Leishmania mexicana
Pathway
lmi03082  ATP-dependent chromatin remodeling
lmi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    LMXM_21_0680
   03083 Polycomb repressive complex
    LMXM_21_0680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lmi03036]
    LMXM_21_0680
Enzymes [BR:lmi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     LMXM_21_0680
Chromosome and associated proteins [BR:lmi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     LMXM_21_0680
   HDAC complexes
    Sin3A-HDAC complex
     LMXM_21_0680
    BRAF-HDAC complex
     LMXM_21_0680
    REST complex
     LMXM_21_0680
    SHIP complex
     LMXM_21_0680
    MiDAC complex
     LMXM_21_0680
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     LMXM_21_0680
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    LMXM_21_0680
  Chromatin remodeling factors
   NuRD complex
    LMXM_21_0680
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 13453995
NCBI-ProteinID: XP_003875307
UniProt: E9AV34
LinkDB
Position
21:complement(195947..197314)
AA seq 455 aa
MDALHKDDAEAPVLNTESRGRVALIDTSGYASDMNISAFVPQHAMKPYRVLAAMDIVRSL
KIDAHCRTVVPPLVKVEELMAYHTDTYLANLGLHSCRSWLWNAETSKVFFSGDCPPVEGL
MEHSIATASGTLMGAVLLNSGQVDVAVHWGGGMHHSKCGECSGFCYVNDIVLGILELLKC
HDRVLYVDIDMHHGDGVDEAFCTSDRVFTLSLHKFGESFFPGTGHPRDVGYGRGRYYSMN
LAVWDGITDFYYLGIFKHALHSIVRRYSPDAIVLQCGADSLAGDRLGLLNLSSFGHGQCV
QAVRDLGIPMVALGGGGYTIRNVAKLWAYETSILTGHPLPPNTVLPVAEMPLSGWLFQDS
PLLIVAQDRSNHVLPGLHCQRAYQMMMEQIDRHVPHIQPHPRLQKASTAAAAVDKQVEDG
ATAVEDFKRQFIQQGTTAGGGGGCRSQATDTRETV
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggacgcgttgcacaaggatgatgccgaggcaccggttttgaataccgaaagccgcggg
cgtgtggcgttgatcgacacctccggctacgcctccgacatgaatatctccgcttttgtg
ccgcagcacgcaatgaagccgtatcgtgtgcttgcggcaatggacattgtgcgcagcctc
aagatcgatgctcactgccgcactgtcgtgccgcctctagtgaaggtcgaggagctgatg
gcataccataccgacacctacctggcgaatctaggcctgcacagctgccgcagctggctg
tggaatgcggagacgtcgaaagttttcttctcgggagactgtcctccggtcgaggggctg
atggagcactccatcgctacagctagtgggacattgatgggagcggtactactcaatagc
ggtcaggtcgacgtggcggtgcactggggtggtggaatgcatcactcaaagtgcggtgag
tgctccgggttctgctacgtgaacgacatcgtgctcggtatcctcgagcttctgaagtgc
catgaccgggtgctgtacgtcgacatcgatatgcaccatggcgacggcgtggacgaggcc
ttctgcacgagcgatcgcgtctttacactgtcactgcacaagttcggtgagagcttcttc
cctggcacggggcacccgcgtgacgtcggctacggtcgtggacgctactacagcatgaac
ctggctgtatgggacggcatcaccgacttctactaccttggcatattcaaacatgcgctg
cactccattgttcggcgctactcaccagatgcgatcgtgctccagtgcggcgccgactcg
ctcgctggtgatcgcctcggcttgcttaacctgtcgtccttcggtcatgggcagtgcgtg
caggcggtgcgtgatctcggtatcccaatggtggcgctcggtggcggcggctacacgatt
cgcaatgtcgcaaagctgtgggcatatgagaccagtatcttgactgggcacccactgccg
ccgaacacggtgctcccggttgccgagatgccgctgagcgggtggctctttcaggactcg
cccctgctgattgtcgcgcaggaccgcagcaaccacgtcttaccggggcttcactgccag
cgtgcgtaccagatgatgatggagcaaattgaccgccacgtgccccacattcaacctcat
ccacgactgcaaaaggcgtccaccgcagccgcagcagtggacaagcaggtggaggacggc
gcgacagccgtcgaagatttcaagcgacagtttatccagcaaggaaccacggcgggcggt
ggaggaggctgcaggtcacaggccacagacactcgggaaaccgtttga

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