Leishmania mexicana: LMXM_21_0680
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Entry
LMXM_21_0680 CDS
T02288
Name
(RefSeq) putative histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03082
ATP-dependent chromatin remodeling
lmi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LMXM_21_0680
03083 Polycomb repressive complex
LMXM_21_0680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmi03036
]
LMXM_21_0680
Enzymes [BR:
lmi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
LMXM_21_0680
Chromosome and associated proteins [BR:
lmi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
LMXM_21_0680
HDAC complexes
Sin3A-HDAC complex
LMXM_21_0680
BRAF-HDAC complex
LMXM_21_0680
REST complex
LMXM_21_0680
SHIP complex
LMXM_21_0680
MiDAC complex
LMXM_21_0680
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
LMXM_21_0680
Heterochromatin formation proteins
Other heterochromatin formation proteins
LMXM_21_0680
Chromatin remodeling factors
NuRD complex
LMXM_21_0680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
13453995
NCBI-ProteinID:
XP_003875307
UniProt:
E9AV34
LinkDB
All DBs
Position
21:complement(195947..197314)
Genome browser
AA seq
455 aa
AA seq
DB search
MDALHKDDAEAPVLNTESRGRVALIDTSGYASDMNISAFVPQHAMKPYRVLAAMDIVRSL
KIDAHCRTVVPPLVKVEELMAYHTDTYLANLGLHSCRSWLWNAETSKVFFSGDCPPVEGL
MEHSIATASGTLMGAVLLNSGQVDVAVHWGGGMHHSKCGECSGFCYVNDIVLGILELLKC
HDRVLYVDIDMHHGDGVDEAFCTSDRVFTLSLHKFGESFFPGTGHPRDVGYGRGRYYSMN
LAVWDGITDFYYLGIFKHALHSIVRRYSPDAIVLQCGADSLAGDRLGLLNLSSFGHGQCV
QAVRDLGIPMVALGGGGYTIRNVAKLWAYETSILTGHPLPPNTVLPVAEMPLSGWLFQDS
PLLIVAQDRSNHVLPGLHCQRAYQMMMEQIDRHVPHIQPHPRLQKASTAAAAVDKQVEDG
ATAVEDFKRQFIQQGTTAGGGGGCRSQATDTRETV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttgcacaaggatgatgccgaggcaccggttttgaataccgaaagccgcggg
cgtgtggcgttgatcgacacctccggctacgcctccgacatgaatatctccgcttttgtg
ccgcagcacgcaatgaagccgtatcgtgtgcttgcggcaatggacattgtgcgcagcctc
aagatcgatgctcactgccgcactgtcgtgccgcctctagtgaaggtcgaggagctgatg
gcataccataccgacacctacctggcgaatctaggcctgcacagctgccgcagctggctg
tggaatgcggagacgtcgaaagttttcttctcgggagactgtcctccggtcgaggggctg
atggagcactccatcgctacagctagtgggacattgatgggagcggtactactcaatagc
ggtcaggtcgacgtggcggtgcactggggtggtggaatgcatcactcaaagtgcggtgag
tgctccgggttctgctacgtgaacgacatcgtgctcggtatcctcgagcttctgaagtgc
catgaccgggtgctgtacgtcgacatcgatatgcaccatggcgacggcgtggacgaggcc
ttctgcacgagcgatcgcgtctttacactgtcactgcacaagttcggtgagagcttcttc
cctggcacggggcacccgcgtgacgtcggctacggtcgtggacgctactacagcatgaac
ctggctgtatgggacggcatcaccgacttctactaccttggcatattcaaacatgcgctg
cactccattgttcggcgctactcaccagatgcgatcgtgctccagtgcggcgccgactcg
ctcgctggtgatcgcctcggcttgcttaacctgtcgtccttcggtcatgggcagtgcgtg
caggcggtgcgtgatctcggtatcccaatggtggcgctcggtggcggcggctacacgatt
cgcaatgtcgcaaagctgtgggcatatgagaccagtatcttgactgggcacccactgccg
ccgaacacggtgctcccggttgccgagatgccgctgagcgggtggctctttcaggactcg
cccctgctgattgtcgcgcaggaccgcagcaaccacgtcttaccggggcttcactgccag
cgtgcgtaccagatgatgatggagcaaattgaccgccacgtgccccacattcaacctcat
ccacgactgcaaaaggcgtccaccgcagccgcagcagtggacaagcaggtggaggacggc
gcgacagccgtcgaagatttcaagcgacagtttatccagcaaggaaccacggcgggcggt
ggaggaggctgcaggtcacaggccacagacactcgggaaaccgtttga
DBGET
integrated database retrieval system