Listeria monocytogenes L99 (serotype 4a): lmo4a_1492
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Entry
lmo4a_1492 CDS
T01989
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lml
Listeria monocytogenes L99 (serotype 4a)
Pathway
lml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lmo4a_1492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lml03019
]
lmo4a_1492
Messenger RNA biogenesis [BR:
lml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
lmo4a_1492
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
CAR84196
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All DBs
Position
complement(1482897..1484564)
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AA seq
555 aa
AA seq
DB search
MTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYL
EENKDRVKAIFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFH
VVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLS
HIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQ
QVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETG
NLGEPIQSLQLMTKGNHPQFNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLTMS
NNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGE
ILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTI
TSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFE
QTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgacaataaaaaaagcgaaaaacataaaaatcattccactcggcggcgtcgatgaaagt
ggcaaaaatttatatgtagtagaaatagacgaagatatctttatattagatgcgggctta
atgttcccagaaaatgaattactaggaatcgacattgtaatccctgatttcaaatattta
gaagaaaataaagatcgtgtaaaagctattttcctaacgcatggtcacgaagatgctatt
ggtgcattgccatacttacttcaaaaaatcaaagcgcctgtttacgggacagaattaacg
attgccctagcaaaatcagcgcttaaagagcatcgcaaactacgcttcaagaatttccat
gtcgttaacgaagaaacaactttatccttttcaaaaattgatgtttcctttttccgtaca
acgcacactattcctgattctgttgggattgttcttgaaacaagcgaaggatctattgtt
tatacaggggatttcaaattcgatcaatcagcgaaggacggctatgcttctgatttaagc
cacattgcagaatttggcgaaaaaggggtactagctttactttcagatagttcagaggct
gagcaccctggaacaacttctagcgatagtttaattgaagaagaaattagacatgctttc
cgaatggcagacggcagaattatcgtcgcttgtgtagcttctaatttaattcgcttacaa
caagtactcgatgcatccgttgcaaccaaacgtaaagtcgctattgttggtaaagaatta
gagcgcgttttcgaaattgctggcagtttaggtaaaatcgtcattgaagaagacttaatt
gttccgttaaaagaacttaaaaaatatagcgatgacgaaattactattattgaaacaggt
aatctaggagaaccaattcaatcattacaattaatgactaaaggaaatcatccacaattc
aacatcaaacctggtgatactgtttacattacgacgacgccatcaccatctcttgaaaca
atgatggctaaaacaatggatatgctctataaagcaggcgcgaaagtgctcactatgagt
aacaatctattcatctctggccatgcaagccaagaagatttaaaattaatgattaactta
ttaaaaccaagatattttgttccagttcacggagaatatcgtatgttaattagccacgct
aaattggctcatgaagttggtatggcgaaatcagaagtatttatcgttggtaaaggtgaa
attttagaatataaaaatgataaaatgacagccggtaatcgcgtttattctggtaatact
ttaattgatggattaggtgttggggacgttggaaacatcgtactacgcgaccgtaaattg
ctttcagaagacggcattttcatcgtagtagtaacactaaatcgcaaatcaaaaaccatt
acttcaggtcctgaaattatttcacgcggctttatctacgtgcgcgaatcagaacattta
attgaagagtcttccaaagttgtcacaaaaattgtcgaaaaaaatcttcaagaaacaggc
tttgaatgggcgaaattaaaacaagatattcgcgatcaattaaatcgctacttatttgaa
caaacaaaacgacgtccaatgattttaccaattattatggaagtatag
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