Listeria monocytogenes 08-5578 (serotype 1/2a): LM5578_1300
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Entry
LM5578_1300 CDS
T01157
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lmn
Listeria monocytogenes 08-5578 (serotype 1/2a)
Pathway
lmn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LM5578_1300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmn03400
]
LM5578_1300
Enzymes [BR:
lmn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LM5578_1300
DNA repair and recombination proteins [BR:
lmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LM5578_1300
Prokaryotic type
LM5578_1300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADB68050
LinkDB
All DBs
Position
1276961..1277635
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AA seq
224 aa
AA seq
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MIKLGNDWDELLKNEFNQPYYLTLRQFLKKEYQTKKVFPDMYDIFNALKHTAYKDVKVVI
LGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDLNCEIPNNGYLIPWADQGVLL
LNTVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVFLLWGSNAKEKLQLLTNPKHT
AFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPIDWQIPSI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgataaaactcggaaatgactgggatgagttactaaaaaatgagtttaaccaaccgtat
tatttaacccttcgccagttcctaaaaaaagaataccaaacgaaaaaagtttttccggac
atgtacgatattttcaatgcattaaagcataccgcctataaagatgtcaaagtggtaatt
ctcggacaagacccatatcatggaccaggtcaagcacacgggctctcattttccgttcaa
caaggagtacagattccaccatcactgcaaaatatttatttagaattacataacgactta
aattgtgagattccaaataatggttatttgataccgtgggcagatcaaggagtgctacta
ttaaatacggttctaactgtacgcgctggtcaagctaactcacaccgaggacaaggctgg
gaaatactaacgaaccacattattgaaatcattaatcaaaaagaagaaccagtagttttt
ttactatggggaagcaatgcgaaagaaaagttgcaattattaacaaacccgaaacatact
gcgtttacatccgttcatcctagcccgctttcagcatcgcgcggttttatgggatgcaaa
catttttctaagacgaatcaattcttagaacaaaatggtgtaaaaccaattgattggcaa
attccttctatataa
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