Listeria monocytogenes WSLC1001 (serotype 1/2a): AX10_00290
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Entry
AX10_00290 CDS
T03114
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lmow
Listeria monocytogenes WSLC1001 (serotype 1/2a)
Pathway
lmow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AX10_00290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmow03019
]
AX10_00290
03009 Ribosome biogenesis [BR:
lmow03009
]
AX10_00290
Enzymes [BR:
lmow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AX10_00290
Messenger RNA biogenesis [BR:
lmow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AX10_00290
Ribosome biogenesis [BR:
lmow03009
]
Prokaryotic type
rRNA helicases
AX10_00290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHJ02955
LinkDB
All DBs
Position
40711..42135
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AA seq
474 aa
AA seq
DB search
MRTDMNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIP
IAEQVEWEENKPQALIIVPTRELAMQVKTECTNIGRFKRVKAAAIYGQSPFAKQKLELSQ
KNHIVVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFIDQVEDILSRLPKQRQNL
FFSATMPEEMQDLIKRYQDNPMVIEMASEKTNPIFHVEMQTDNKEKTLKDVLITENPDSA
IIFCNTKNQVDELTDLLDVKASKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDV
DNVSLVINYDLPIEKENYVHRIGRTGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKK
RKPTVIEVKANEEAFHKKQQKRPTIKKARGEKLNKNIMKLYFNGGKKKKIRAVDFVGTIS
KLEGITAEDIGIITIEDHVSFVEILNGKGPAVLEMMRSRKVKGRRLKVNEARKR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgacatgaataatttaaaattaagtgaagaaattaaaagagcgattaatgaa
ctaggatatacagaagcaacacctgttcaaaaagcggtaattccagttgccttaacagga
gaagatattgttgctaaatcacaaactggtagtgggaaaacagcagcatttgctattccc
attgcagaacaggttgaatgggaagaaaataagccacaagcactaatcatcgttccaaca
cgagaacttgcaatgcaagtcaagacagaatgtacgaatatcggacgatttaaacgtgtc
aaagctgcagcaatatatggacaatcaccatttgctaaacaaaaattagaactaagccaa
aaaaatcatatagtcgttgggacccctggtcgcctacttgaccatattgaaaaaggatca
ctgaatgtcgacaaggttgcccatttagttttagatgaagtagatgaaatgttaagcatg
ggatttattgatcaagtggaagatatccttagccgcttaccaaaacagcgccaaaatcta
tttttctctgcaactatgccagaagaaatgcaagatttgatcaaacgttaccaagataat
ccaatggttatcgaaatggcatcagaaaaaacaaatcctatcttccacgtggagatgcaa
acagataataaagaaaaaacgttaaaagatgttttaattacggaaaacccggatagtgcg
attattttttgcaatacaaaaaatcaagtcgatgaactcactgatttacttgatgtaaaa
gctagtaaaattcatggtggcttaagacaagaagatcgtttccgagcaatggatgatttc
aaaagtggcaaatcgcgtttcttaattgcgacagatgtggcagggcgtggaatagatgtg
gataatgtatcgttagtcattaactacgatttaccaattgaaaaagaaaattatgtgcat
cgtatcggtcgtactggacgcgctggcaaaagtgggaaagctattagtttcgtgaaaaca
aatgaaaatccacttttgcgtgatattgaagagatgctcgatgttacaattgaaaaaaaa
cgtaaaccgacagtgattgaagtgaaagcaaacgaagaagctttccacaaaaaacaacaa
aagcgcccaacaatcaaaaaagctcgtggggaaaaattaaataaaaacattatgaaactg
tattttaacgggggcaaaaagaaaaaaatccgtgcggtagattttgtgggaactatttct
aaattagaaggaattacggccgaagatattggaattattacgattgaagaccatgtttct
tttgtcgaaattttaaatggaaaaggtccggcagtgctggaaatgatgcgctctcgtaaa
gtgaaaggtagacgcctgaaagtaaacgaggccagaaaacgataa
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