Ligilactobacillus murinus: CPS94_02350
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Entry
CPS94_02350 CDS
T07549
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lmur
Ligilactobacillus murinus
Pathway
lmur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPS94_02350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmur03400
]
CPS94_02350
Enzymes [BR:
lmur01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CPS94_02350
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CPS94_02350
DNA repair and recombination proteins [BR:
lmur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPS94_02350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DZR
OrfB_Zn_ribbon
RNHCP
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AWZ37842
LinkDB
All DBs
Position
477525..478355
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVETVRRGLQKLVLGQKIARVEVLYPKMIVGDADDFRAKLKDQTLENIQRRGKYL
LFRFSNGLTVVSHLRMEGKFYVKEATDPVDKHTHVIFYLTDGRQLRYNDVRKFGRMQLVQ
TGSEEDLLGLAKLGPEPVAETFKVADFYQKLQKKKKNIKTALLDQTLVTGLGNIYVDEVL
WQSKIHPQTICQKLTLEQATTLHDNIITELAKAIEAGGTTIRSYTDAFQKTGAFQFELDV
YGQTGEPCKRCGTKIQKIVVGQRGTHFCPQCQQVVK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttaccagaagtagagacagtccggcgcggcttgcaaaaattagttctaggt
caaaagatcgcgcgcgtcgaagttttatatcctaagatgatcgttggtgatgctgacgat
tttagagctaaattaaaagaccaaacacttgaaaatatccaacggcggggtaaatatttg
ctctttaggttttcaaatggtcttaccgttgtatcccatttgcgcatggaaggtaagttt
tatgtcaaagaagcgactgatccagtcgacaagcatacacatgtcatcttttatctaact
gatggtcggcagttgcgctataacgatgttcgtaaatttgggcggatgcaattagttcaa
acgggcagtgaagaagatctactaggtttagccaaattaggacctgagccagtagctgaa
acttttaaagttgctgatttttatcaaaaactacaaaaaaagaagaaaaatatcaagacc
gccttacttgaccagactttggtcacggggttaggtaatatctatgttgatgaggtgttg
tggcaaagtaagatccatccgcagactatatgtcaaaaattgaccttagagcaagcaacg
acattgcatgataacatcattactgaattagctaaggcgatcgaagctggtggaacaacg
atcagaagttacacggatgctttccaaaaaacgggcgcctttcaatttgaactagatgtc
tacggtcaaaccggtgagccgtgcaaacgttgtggtacaaagatccaaaagatcgtggta
ggacaacgaggcacgcatttttgtccgcagtgtcagcaggtggtaaaatga
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