Lagopus muta (rock ptarmigan): 125690187
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Entry
125690187 CDS
T09141
Symbol
JAG1
Name
(RefSeq) protein jagged-1 isoform X1
KO
K06052
jagged-1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04330
Notch signaling pathway
lmut04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125690187 (JAG1)
04371 Apelin signaling pathway
125690187 (JAG1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lmut04090
]
125690187 (JAG1)
CD molecules [BR:
lmut04090
]
Proteins
125690187 (JAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_2
DL-JAG_EGF-like
DSL
JAG1-like_EGF2
EGF_CA
CD34_antigen
IN_DBD_C
DC_STAMP
DUF2920
Motif
Other DBs
NCBI-GeneID:
125690187
NCBI-ProteinID:
XP_048794279
LinkDB
All DBs
Position
2:complement(96753109..96790018)
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AA seq
1216 aa
AA seq
DB search
MRAARRAAARSLVLLVALLGLRAQVVSASGQFELEILSVQNVNGVLQNGNCCDGTRNPGD
KKCTRDECDTYFKVCLKEYQSRVTAGGPCSFGSKSTPVIGGNTFNLKYSRNNEKNRIVIP
FSFAWPRSYTLLVEAWDYNDNSTNPDRIIEKASHSGMINPSRQWQTLKHNTGAAHFEYQI
RVTCAEHYYGFGCNKFCRPRDDFFTHHTCDQNGNKTCLEGWMGPECNKAICRQGCSPKHG
SCTIPGECRCQYGWQGQYCDKCIPHPGCVHGTCIEPWQCLCETNWGGQLCDKDLNYCGTH
PPCLNGGTCSNTGPDKYQCSCPEGYSGQNCEIAEHACLSDPCHNGGSCLETSTGFECVCA
PGWAGPTCTDNIDDCSPNPCGHGGTCQDLVDGFKCICPPQWTGKTCQLDANECEGKPCVN
ANSCRNLIGSYYCDCITGWSGHNCDININDCRGQCQNGGSCRDLVNGYRCICSPGYAGDH
CEKDINECASNPCMNGGHCQDEINGFQCLCPAGFSGNLCQLDIDYCEPNPCQNGAQCFNL
AMDYFCNCPEDYEGKNCSHLKDHCRTTPCEVIDSCTVAVASNSTPEGVRYISSNVCGPHG
KCKSQAGGKFTCECNKGFTGTYCHENINDCESNPCKNGGTCIDGVNSYKCICSDGWEGTY
CETNINDCSKNPCHNGGTCRDLVNDFFCECKNGWKGKTCHSRDSQCDEATCNNGGTCYDE
GDTFKCMCPAGWEGATCNIARNSSCLPNPCHNGGTCVVSGDSFTCVCKEGWEGPTCTQNT
NDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCAFGATCIDEINGYR
CICPPGRSGPGCQEVTGRPCFTSIRVMPDGAKWDDDCNTCQCLNGKVTCSKVWCGPRPCV
IHAKGHNECPAGHACVPVKEDHCFTHPCTAVGECWPSNQQPVKTKCNSDSYYQDNCANIT
FTFNKEMMAPGLTTEHICSELRNLNILKNVSVEYSIYITCEPSHLANNEIHVAISAEDIG
EDENPIKEITDKIIDLVSKRDGNNTLIAAVAEVRVQRRPVKNKTDFLVPLLSSVLTVAWI
CCLVTVFYWCIQKRRKQSSHTHTASDDNTTNNVREQLNQIKNPIEKHGANTVPIKDYENK
NSKIAKIRTHNSEVEEDDMDKHQQKARFAKQPAYTLVDRDEKPPNSTPTKHPNWTNKQDN
RDLESVQSLNRMEYIV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcggcccggcgggcggcggcgcgctccctcgtcctcctcgtggccctgctgggg
ctgcgggctcaggtggtgtcagcatcgggacagttcgagctggagatcttatccgtgcag
aatgtgaacggcgtgctgcagaatgggaactgctgcgacggcactcgaaaccccggagat
aaaaagtgtaccagagacgagtgtgacacctactttaaagtttgcctgaaggagtaccaa
tcgcgggtcaccgctggcggcccttgcagcttcggatccaaatccacccctgtcatcggc
gggaataccttcaatttaaagtacagccggaataacgaaaagaaccggattgttatccct
ttcagcttcgcctggccgagatcctacacgctgcttgttgaggcatgggattacaatgat
aactctacgaatcctgatcgcataattgagaaggcatcccactctggcatgatcaatcca
agccgccagtggcagacactgaaacataacacaggagctgcccactttgagtatcaaatc
cgtgtgacctgtgcagaacattactatggctttggatgcaacaaattttgtcgaccgaga
gatgacttcttcactcaccatacctgcgaccagaatggcaacaaaacctgcttggaaggc
tggatgggaccagagtgcaacaaagctatttgtcgtcagggatgtagccccaagcatggc
tcttgcacaattccaggagagtgcaggtgtcagtatggatggcaaggccagtactgtgat
aagtgcattccacacccaggatgtgtccatggcacttgcattgaaccatggcaatgcctc
tgtgaaaccaactggggtggtcagctctgtgacaaagatctgaactactgtggaacccac
ccaccctgtctgaatggtggtacctgcagcaacactggccctgataaataccagtgttcc
tgccctgagggctactctggacagaactgtgaaattgcggagcacgcatgcctctctgat
ccgtgccacaatggaggaagctgcctagaaacgtctacaggatttgaatgtgtgtgtgca
cctggctgggctggaccgacttgcactgataatattgatgattgttctccaaatccatgt
ggtcatggaggaacttgccaagatctagttgatggatttaagtgtatttgcccacctcag
tggactggcaaaacatgccagctagatgcgaatgaatgtgagggcaaaccctgtgtcaat
gccaactcctgcaggaacctgattggcagctactattgtgactgcattactggctggtct
ggccacaactgtgatataaatattaacgattgtcgtgggcaatgtcagaatggaggatcc
tgccgggacttggttaatggttatcggtgcatctgttcacctggctatgcaggagatcac
tgtgagaaagacatcaatgaatgtgcaagtaacccttgcatgaatgggggtcactgccag
gatgaaatcaatggattccaatgtctgtgtcctgctggtttctcaggaaacctctgtcag
ctggatatagactactgtgagccaaatccttgccagaatggtgcccagtgcttcaatctt
gctatggactatttctgtaactgccctgaagattacgaaggcaagaactgctcccacctg
aaagaccactgccgcacaactccttgtgaagtaatcgacagctgtacagtagcagtggct
tccaacagcacaccagaaggagttcgttatatttcttcaaatgtctgtggtcctcatgga
aaatgcaagagccaagcaggtggaaaattcacctgtgaatgcaacaaaggattcactggc
acctactgtcatgagaatatcaatgactgtgagagcaacccctgtaaaaatggtggcact
tgtattgacggtgtaaactcttacaaatgtatttgtagcgatggatgggaaggaacatat
tgtgaaacaaatattaatgactgcagtaaaaacccttgccacaatggaggaacttgccga
gacttggtcaatgacttcttctgtgaatgtaaaaatgggtggaaaggaaaaacttgccac
tctcgtgacagccaatgtgatgaggcaacatgcaataacggaggaacatgttatgatgag
ggggacactttcaagtgcatgtgtcctgcaggatgggaaggagccacttgtaatatagca
aggaacagcagctgcctgccaaacccctgtcacaatggtggtacctgtgtagtcagtggg
gattctttcacttgtgtctgcaaggagggctgggaaggacccacatgtactcagaacaca
aatgactgcagtcctcatccttgttacaacagtggtacttgtgtggatggagacaactgg
taccgctgtgagtgcgctccaggcttcgcaggtcccgactgtaggatcaacatcaatgaa
tgtcagtcttcaccctgtgcctttggggctacttgcatagatgaaattaatggataccgt
tgcatttgtccaccgggtcgcagtggtccaggatgccaggaagttacagggaggccttgc
ttcaccagtattcgagtaatgccagacggtgctaagtgggatgatgactgtaatacttgt
cagtgtttgaatgggaaagtcacctgttctaaggtttggtgtggtcctcgaccttgtgta
atacacgccaaaggtcataacgaatgcccagctggacatgcttgtgttcccgttaaggaa
gaccattgtttcactcacccttgtactgcagtgggtgaatgctggccttctaatcaacag
cctgtgaagaccaaatgcaattctgattcttattaccaagataactgtgccaacatcacc
ttcacctttaataaggaaatgatggcaccaggccttaccacggagcacatttgcagcgaa
ttgaggaatctgaatatcctgaagaatgtttctgttgaatattccatctatattacctgt
gagccttcacacttggcaaataatgaaatacatgttgctatttctgctgaagatataggg
gaagatgaaaacccaatcaaagaaatcacagataagattatcgaccttgtcagtaagcgt
gatggaaacaacacactaattgctgcagttgcagaagtcagagtacaaagacgaccggtt
aaaaacaaaacagatttcttggtgccattactgagctcagtcttaacagtagcctggatc
tgttgcctggtaactgttttctattggtgcattcaaaagcgcagaaagcagagcagccat
actcacacagcatctgatgacaacaccaccaacaacgtaagggagcagctgaatcaaata
aaaaaccccatagagaaacacggagcaaacactgttccaattaaagactatgaaaacaaa
aactctaaaatcgccaaaataaggacgcacaattcagaagtggaggaagatgacatggac
aaacaccagcaaaaggcccggtttgccaagcagccagcatatactttggtagacagagat
gaaaagccacccaacagtacacccacaaaacacccaaactggacaaataaacaggacaac
agagacttggaaagtgtacaaagtttaaatagaatggagtacattgtatag
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