Lagopus muta (rock ptarmigan): 125693239
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Entry
125693239 CDS
T09141
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04510
Focal adhesion
lmut04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125693239 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125693239 (LAMC1)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Laminin_II
Motif
Other DBs
NCBI-GeneID:
125693239
NCBI-ProteinID:
XP_048800842
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Position
5:26472510..26522540
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AA seq
1603 aa
AA seq
DB search
MGGVGGRRALPRALALLTVLALPRGGGAAMDECLEERSGRPQRCMPEFVNAAFNATVVAT
NTCGTPAEEYCVQTGVTGVTQSCHLCDASQPHLRHGASFLTDYNSQADSTWWQSQSMLAG
VQHPAAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCESTY
NKVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTA
TDIRVSLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECIRNELGKLVCN
CKHNTFGDDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRSTGHGGH
CSGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQCSCKPGVMGEK
CDRCQPGFHSLSEAGCRPCSCNPAGSTGECNMETGRCTCKDNVEGFHCERCKPGFFHLDP
SNPRGCTPCFCFGHSSVCTNAVGYSVYSIASSFQFGEDEWHAEQRDGSQVPLQWSSETQD
ISVISDSYFPIYFVAPRKFLGNQVWSYGQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSV
PLIAQGNSYPSESPLTYTFRLHEAADYPWRPALSAFDFQKLLHNLTAIKIRGTYSERSAG
HLDDVTITSAVPGAGVPAAWVESCSCPAGYEGQFCERCSPGYRRETPGLGPYSPCVPCSC
NGHSETCDPETGVCDCRDNTAGSHCEKCSDGYYGDATAGTALDCQPCPCPAGSSCAIVPR
TKEVVCTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQT
GECLKCIYNTAGFYCDRCKDGFFGNPLASNPADKCRACHCNPYGTVNQQTSCNQVTGQCE
CLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNGQCDIWTGQCECQPGVTGQHCD
RCEANHFGFGPEGCKPCDCDPEGSRALQCREDGRCECKEGFVGNRCDQCEENYFYNRSWP
GCQECPACYRLVKDKVAEQRERLRELENLIANLGTGEETVTDQAFEERLKQAERDVMELL
REAQNSKDVDQGLMDRLRDINSTLTSQLSRLRNIQNTVQETENLAEQARGRVEDTEDLIA
MASDMLEKAKMAAGNVSITAPESSGDPNNMTLLAEEARRLAERHKQEADEIVRIAKAAND
TSTEAYQLLLKTLAGENQTARDIDELNQKYNQARNISRDLERQASSVLEEAEEAGNKALQ
IYANLTNLPTVDTTGLESEANKIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLE
KGKTEQQTADQLLARADAAKALAEEAARKGNGTLQEANTILSNLKDFDKRVNDNKTAAEE
ALKKIPAITQTIAEANNKTRQAELALGNAAADAREAKTRADDAEKIASTVQKSAAATRAE
ADKTFSDVTGLAKEVDDMMKQLQEAEKELKRKQDDADQDMMMAGMASQAAQEAEDNARKA
KNSVNSLLAVINDLLDQLGQLETVDLNKLNEIEGTLNSAKDQMKDSDLDQKVAFLEREAR
KQDDAIQSYNRDIEEILKDISNLEDIRKTLPSGCFNTPSIEKP
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgttggcgggcggcgggcgctgccgcgggcgctggcgctgctgaccgtgctg
gcgctgccccgcggcggcggcgctgcgatggacgagtgcttggaggagcggagcgggcgg
ccgcagcgttgcatgcccgagttcgtcaacgccgctttcaacgccacggtggtggccacc
aacacgtgcggcacgccggccgaggagtactgcgtgcagaccggcgtcaccggcgtcacc
cagtcgtgccacctgtgcgacgcctctcagccccacctgcggcacggcgcctccttcctc
accgactacaacagccaggccgacagcacctggtggcagagccagagcatgctggctggc
gtacagcaccccgccgccgtcaacctcaccctgcacctcggaaaggcctttgacatcaca
tatgtgagactgaagttccacaccagcaggccagagagcttcgccatctacaaacgcaca
cgggaggatggcccgtgggtgccctaccagtattacagtgggtcctgtgagagcacctat
aacaaagtcaaccggggctttattcggactggggaggacgagcagcaggcactctgcacg
gatgagttcagtgacatctcccccctcactgggggcaatgtggctttctcaacgttggag
ggacgtcccagcgcctacaactttgacaacagccctgtgctgcaggaatgggtgacggcc
accgatattcgggtgagcctcaaccgcctcaacaccttcggagatgaagttttcaatgac
cccaaagtgctcaagtcgtattactacgcgatttctgattttgccgtgggtggtagatgc
aaatgcaatggccacgcgagcgagtgcataaggaatgagcttgggaagctggtctgcaac
tgcaagcacaacacctttggggatgactgtgagaagtgccttcccttcttcaatgaccgg
ccgtggagaagagcaacagcagaaagtgccaacgagtgcttgccttgtgactgcaatggg
agatcccaggagtgctacttcgaccccgagctgtaccgctccaccggccatggcgggcac
tgctcgggctgccgggacaacactgacggcgcccactgcgagaggtgcagagacagcttc
taccgcctcgggagcgaggagggctgcctgccctgcagctgcaaccccgtgggctccctc
agcacgcagtgtgatagctatggccagtgcagctgcaaacctggtgtcatgggagagaaa
tgtgaccgttgccagccgggcttccactccctctctgaggctgggtgcaggccctgttct
tgcaatcctgctggcagcacaggtgaatgcaacatggaaacaggacggtgtacttgcaag
gacaacgttgagggcttccactgtgagagatgcaaacctgggtttttccatctggatccc
tcaaatccaagaggctgtacaccctgcttctgttttggacactcctcagtttgcaccaat
gctgttggctacagcgtgtacagcatcgcctccagctttcagtttggagaggacgagtgg
catgctgagcaacgtgatggctcccaagtcccactgcagtggagttcagagacccaggac
atctctgtcatctcagacagttacttccccatctattttgttgcaccacgcaagtttttg
ggcaaccaagtttggagctacggtcagaatctgaccttctccttccgtgtggacagacgg
gacacacgtctctctgcagaggacctggtgctggaaggggccgggctgcgtgtgtcggtg
cctctcattgcccagggcaactcgtaccccagtgagagcccactgacctacaccttcagg
ctccatgaggctgccgattacccgtggaggcctgctctctctgcattcgacttccagaag
cttcttcacaatttgactgccatcaagatccgtggaacatacagtgagagaagtgccggt
cacctggatgacgttaccatcaccagcgctgtcccaggggccggcgtgcccgcggcatgg
gtggagagctgctcctgccctgcaggctatgaagggcagttctgtgagcgctgctccccc
gggtaccgccgagagacccctggcctgggaccctacagcccctgcgtgccttgcagctgc
aatgggcacagcgagacctgtgatcctgagacgggcgtttgtgactgcagggataacact
gcaggctctcactgtgagaagtgcagtgatgggtactacggagatgcgacagcaggcaca
gccctggactgccagccctgcccgtgccctgctggctccagctgcgctatcgtgccccgc
acaaaggaggttgtgtgcaccagctgccagacaggcaccacaggcaagaggtgtgagctg
tgtgatgatgcctactttggagacccgctgggtgaaaatggggctgtgaggccgtgccgc
ctgtgccagtgcaatgacaacatcgatcccaacgctgtgggcaactgcaaccgacagaca
ggagagtgcctcaagtgcatctacaacacggccggcttctattgcgaccgctgcaaggat
ggcttctttgggaaccctctggcctccaaccctgctgacaaatgccgggcttgtcactgt
aatccctatggcaccgtgaatcagcagacgagctgcaatcaagtgacagggcagtgtgag
tgcctttcccatgtcaccgagagggactgcagtgcctgcgagcctggcttcttcaacctg
cagagcggccgaggctgtgagaggtgtgactgccatgctctgggctccaccaacggccag
tgtgacatatggacggggcagtgtgagtgccagcccggcgtcaccggccagcactgcgac
cgctgcgaggccaaccactttgggttcggccctgagggctgcaaaccatgtgactgtgac
ccggagggctcacgtgccctgcagtgccgtgaggatggtcgctgtgagtgcaaggagggc
tttgtggggaaccgctgcgaccagtgcgaggagaactacttctacaacaggtcatggccg
ggctgccaggagtgccctgcgtgttacagattagtgaaagataaggtagcagagcaacga
gagaggttacgggagctggaaaaccttatagcaaacctgggcacgggagaagaaactgtc
actgatcaagccttcgaggagaggttgaagcaggcagaaagagatgttatggagctgctc
cgagaagcacagaacagcaaagacgtagatcagggtctcatggatcgtctcagagacatc
aacagcacactgacaagtcagctcagcaggctgaggaacatccagaacacggtgcaggag
acagagaacctggcagagcaagcccggggccgggtggaggacacagaggacctgattgca
atggcttctgatatgttggagaaggcaaagatggcagctggcaacgtgtccattacagcc
ccggagtcgagtggtgaccccaacaacatgactctattggcagaagaggctcgccggctg
gctgagaggcacaaacaagaagctgatgagattgttcgcattgccaaggcagccaacgat
acttccacagaagcgtatcagctgctgctgaagaccctggctggggaaaaccaaacagca
cgtgatattgatgagctcaaccagaagtataaccaagcaagaaacatttctcgagatcta
gagagacaggccagcagtgtgcttgaggaggcagaggaagctggaaataaggccctccag
atctatgctaatctcactaatctgcccactgtggacaccacagggctggagagtgaagca
aataagatcaagaaggaagcggaggagttagatcagttaatagcaaggaagttgaaggac
tatgaagatctgagggaagatatgaaaggaaaggagctggaagtcaagaacctcttggag
aaagggaagacggagcagcagactgcagaccagctcctggctcgagcagatgcagcaaaa
gccctggctgaggaagctgctcggaagggcaatggcacattgcaggaggccaacaccatt
ctcagcaacctgaaagatttcgataagcgggtgaacgacaacaagacagcagctgaggag
gctctgaagaagattcctgccattacccagaccattgctgaagccaacaacaagacccgc
caggcagagctggctctcggcaatgctgctgctgatgcccgtgaagccaaaactagagca
gatgatgctgagaaaattgccagcactgttcagaagagtgctgctgccaccagagcagaa
gcggacaagaccttctctgacgtgacggggctggccaaggaggtggatgacatgatgaag
caactccaggaggcagaaaaagagctgaaacgtaaacaagatgatgctgatcaggatatg
atgatggcaggcatggcctcacaggcagcccaggaggcagaagacaacgcaagaaaagcg
aaaaactctgtgaacagcttgcttgctgtcattaatgaccttttagaccaactagggcaa
ctggagactgtggacttgaacaaactgaatgagattgagggtaccctgaacagtgccaaa
gaccagatgaaagatagcgacctggaccagaaggtggctttccttgagagagaagccagg
aagcaagatgatgcgatacagtcctacaatagggacattgaggaaatcctgaaagacatt
agcaacctggaggacatcaggaagaccttgccatctggctgttttaacaccccgtccatt
gagaaaccctaa
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