Lagopus muta (rock ptarmigan): 125700856
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Entry
125700856 CDS
T09141
Symbol
CASKIN1
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125700856 (CASKIN1)
Membrane trafficking [BR:
lmut04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
125700856 (CASKIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
Caskin-Pro-rich
Caskin1-CID
Caskin-tail
SAM_2
Ank_3
SH3_2
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
125700856
NCBI-ProteinID:
XP_048818047
LinkDB
All DBs
Position
15:8835026..8863321
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AA seq
1541 aa
AA seq
DB search
MGKDQELVQAVKAEDIAAVQKLLQRPKPGKAKLLGSAKRVNVNFQDTDGFSALHHAALNG
NTELISLLLEAQAAVDIKDNKGMRPLHYAAWQGKKEPMKMVLKAGSSVNIPSDEGQIPLH
LAAQHGHYDVSEMLLQHQSNPCIMDNSGKTPLDLACEFGRVGVVQLLLNSNMCAALLEPK
PGDTTDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKAGTALHEAALCGKTDVVRLL
LDSGINAHVRNTYNQTALDIVNQFTTSQASKEIKQMLRDASAALQVRAVKDYCNNYDLTS
LNVKAGDVITVLEQHADGRWKGCIHDNRTGNDRVGYFPSSLVEAISKRTGSWETVTIPQQ
YQKIPLPAYGAAVLNGDASSHPFHSLPPPPPPPPHSHQTLFSSFGYHRLSPSSADEPRYG
QGSRGADMSPSHLSPSQGGSAAPAPTEEIWVLRKPFTGGDRSSLGSTGSVASARSSGSGQ
STGSGAHALHAGSEGVKLLATVLSQKASAQDAAVGDGPAKAQDIPAAGSSRSQSVASSPY
APQPPAEQQLKKMEPPSEGKSSEAVYQWLCKFQLQLYAPNFINAGYDITTISRMTPEDLT
AIGVTKPGHRKKIASEINNLNIPEWLPEYKPANLALWLSMIGLSQYYKVLVENGYENIDF
ITDITWEDLQEIGITKLGHQKKLMLAVKKLAELQRAELGKYEPGTLKRKAAACPEVLAIE
SPPPEPPECQSPKMTTFQDSELSSELQVAMTGEGPEETPEKPANPAAPGYRSPPALGGRA
RQMSSSQELLGDGPRAPASTAISKSQEYLAEGAPEGPPVPPTKELRQPRHGHSVKRASVP
PVPGKPRQAFPPTAGHLTPPQTPGKPRPPSPQGPSAPHATAKVKPTPQLLPPGERPASPR
SLPQSPTHRGFAYVLPQPTDGEGAPPGVPVLPVSVPVLCLPPAGEGEEEPGRPKKRAHSL
NRYATSDSEQERDELLVPDAGPYATVQRRVGRSHSVRAPAGGDKNVNRSQSFAIRPKKKG
PPPPPPKRSSSAISSAGMAEDFPKDGEGEVAAGTPGTEGESRQEQRRASDLGGSVDTGSA
GSVRSIAAMLEMSSIGGGARALALQKPPGAGVPGKGPDGYYLQPGAPPGSPERARVATVL
ATVKHKEAIGLDGEVVNRRRTISGPVTGLVAAARREHADSVRSETGADGPSERLRAERGG
SPDTIPFAEEGNLTIKQRPRALGPARVEAGEGLSPAHRHGDLAKVEASATLKRRIRARQS
QQDSIRFILTESDTVKRRPKAKDKEPALEQAPLVVYQNGTGTVKRRPASELSGAETPPTP
PPATRPDGPDFTPPPAEPKKPFKPPVSPKPVLTQPAQKVPGPPVPIPKKMPIPSPGSPEV
KRVHGTPPPVSPKPTPPPTAPKPPKPHAAIQSVSAGSTPTPSPARQLGATAKPSSTPPSL
CSSPAKPLSPGAQPQQVPVKPPRSAIAGPSVDSASPELVQQKLEETSASLAAALQAVEEK
IKQEDSQAADSTAEAKSTGSILDDIGSMFDDLADQLDAMLE
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaccaggagctggtgcaggcggtgaaggcggaggacatcgcggccgtgcag
aagctgctgcagaggcccaaacccggcaaagccaagctccttggatcagcaaagagagtc
aatgtcaatttccaggacaccgatgggttctctgccctgcaccatgcagcactcaatggg
aacacagagctcatctcgctgctgctggaggcacaggctgcggtggacatcaaggataac
aaaggcatgcggcccttgcactatgcggcctggcaaggcaagaaggagcccatgaagatg
gtgctgaaggcaggctcctctgtgaacatcccatcagatgagggacagatccccctgcac
ctggcagcacagcatgggcactatgacgtgtctgaaatgctcctgcagcaccagtccaac
ccctgcatcatggacaattcaggcaagacgcccctggacttggcatgcgaatttggccgg
gttggggtggtccaactgctcctgaacagcaacatgtgtgcggcgctgctggagcctaag
ccaggggacaccaccgaccccaatggcaccagccctctgcaccttgcggccaagaatgga
cacattgacatcatccggcttctgctgcaagctggcattgacatcaacaggcagaccaag
gcgggcacagcactgcacgaggcagccctgtgtggcaagacggacgtggtgcggctcttg
ctggatagtggaattaatgcccacgtccggaacacgtacaaccagacagctctggatatt
gtcaaccagttcaccaccagccaggccagcaaggagatcaagcagatgctgcgggacgcc
tcagctgcactgcaggtgcgggctgtcaaggactattgcaacaactacgacctgaccagc
ctcaatgtgaaagctggagacgtcatcactgtgctggagcagcatgcagacgggcgctgg
aagggctgcatccacgacaatcggaccggcaacgaccgcgtgggctacttcccctccagc
ctcgtggaagccataagcaagcgaacaggttcatgggagactgtaacaatcccccaacag
taccaaaagatcccgctcccggcttacggggctgctgtgctaaacggtgacgcctcgtcc
catccgttccattccctgcctccacctccacctccaccaccacattcccatcagactctt
ttcagttcctttggctatcacaggctctcccctagcagtgccgacgagccgcgttacgga
caagggtcccgtggggctgacatgagcccatcccacctttcaccatcgcagggtggatcg
gctgcacctgcacccaccgaggagatctgggtgctgcggaaacctttcacaggtggcgat
cgcagcagcctgggtagcacgggcagcgtggcctcagcccgcagctccgggagtgggcag
agcacgggcagcggggcgcacgccctgcatgctggctccgagggcgtcaagctgctggca
acggtcctttcccagaaggcttctgcgcaagatgctgccgtgggcgatgggccggccaag
gcgcaggacatccccgcagcaggctcgtcgcggtcgcagagtgtggccagctccccctat
gcaccccagccacctgccgagcagcagctgaagaagatggagccaccatcagaggggaag
agctcagaagctgtgtaccagtggctgtgtaagttccagctgcagctctatgcacccaac
ttcatcaacgccggctacgacatcaccaccatcagccggatgacgccagaggacctcacg
gccattggtgtcaccaagccagggcacaggaagaagattgcctctgagatcaataacctc
aacatccccgagtggctgcctgagtacaagccggccaacctggcgctgtggctctccatg
attggcctgtcccagtactacaaggtgctggtggagaacggctacgagaacatcgacttc
atcactgacatcacctgggaggacctgcaggagatcggcatcaccaagctgggccaccag
aagaagctgatgctcgcagtgaagaagctggcagagctgcagcgggctgagctgggcaag
tatgagccaggcacactgaagaggaaggcagcggcatgcccagaggtgctggccattgag
tccccaccacctgagccacccgagtgccagtcacccaagatgacaacgttccaggacagc
gagctgagcagtgagctgcaggtggccatgacaggtgaaggccctgaggagacgcccgag
aaaccagccaaccctgcagcccctggctaccgatcaccaccagcgctgggcggccgcgcc
aggcagatgagcagctcacaggagctgctgggtgatggcccccgtgcccctgccagcacc
gccatctccaagagccaggagtacctggcagagggggcccccgagggtccccccgtgccg
ccaaccaaggagctccgccagccacggcacggccactctgtcaagcgtgccagtgttccg
ccggtgcccggcaaaccccggcaggccttcccgcctaccgccgggcacctgacaccacca
cagacccctggcaagccacgtccaccctccccacagggcccatcagcaccccacgccact
gccaaggtgaagcccactccacagctgctgccaccgggtgagcgccccgcatcaccccgc
tccctgccccagtctcccacgcaccgtggctttgcctacgtccttccacagcccaccgat
ggtgagggggcccccccaggggtgccggtcctgcctgtctcagtgccagtgctgtgcctg
ccaccagcaggtgagggtgaggaggagccggggaggccgaagaaacgggcacacagcctg
aaccgctacgccacctccgacagcgagcaggagcgggacgagctgctggtgcctgacgcg
gggccttatgctaccgtgcagcggcgcgtggggcgcagccactcagtgcgggcacctgcc
ggtggtgacaagaatgtcaaccgcagccagtccttcgccatccgccccaagaagaagggg
cccccgccaccaccccccaagcgctccagctctgctatatccagtgctggcatggccgag
gacttccccaaggatggtgaaggtgaggtggccgctggaacccctggcaccgagggggag
agtcgtcaggagcagcggcgtgccagcgatctgggtggcagcgtggacacgggcagcgcc
ggcagcgtgcgcagcattgcagccatgctggagatgtcctccattggtggtggggcgcgg
gcgctggccctgcagaaaccacctggggctggtgtgcctgggaaggggcccgatggatac
tatctgcagccaggagctcccccaggaagccctgagcgtgcccgtgtggccaccgtcctg
gctaccgtcaagcacaaggaggccattgggctggatggggaggttgtgaaccggcgccgg
accatcagcggtcctgtcaccgggctggtggcggccgcacgccgcgagcatgccgacagt
gtgcgctccgagacaggcgctgatggccccagcgagcgtctgcgggctgagcgtggtggc
tctccagacacaatcccctttgctgaggagggcaacctcaccatcaagcagcgaccacgt
gccctgggaccagcccgggtggaggcaggagaagggctgtccccagcgcaccgccatgga
gacctggccaaggtggaggccagtgccacacttaagaggcgcatccgtgcccggcagagc
cagcaggacagcatccgcttcatcctcaccgagtctgacactgtcaagcgccggcccaag
gccaaggacaaggaaccagcgctggagcaagcccctcttgtcgtctaccagaacggcacc
ggcactgtcaagcggcggccagcttcagagctgagtggagctgagactcccccaacccca
ccgcctgccacccgccccgacggccctgacttcaccccaccgcctgccgagcccaagaaa
cccttcaagccaccggtgtcccccaagcctgtgctaacgcagccagcgcagaaagtccct
gggccaccagtgcccatccccaaaaagatgcccatcccaagcccaggcagcccagaggtg
aagcgggtccacggcacaccacccccggtatcccccaagcccacaccaccccccacagcc
cccaagccccccaagccccatgccgccatccagtcggtgagcgcgggctccacgccaact
ccgtcccccgcccggcagctgggcgctactgccaagccctccagcacaccgccctcactc
tgctccagccctgccaagcccctctcacccggcgctcagccccagcaggtgccagtgaaa
ccaccgcgttccgctatcgccggaccctctgttgacagtgccagccctgagctggtgcag
caaaagctggaggagaccagcgcatccctggctgctgcgctacaggctgtggaggagaag
atcaagcaggaggacagccaggcagcagactccactgcagaggcaaagagcacaggcagc
atcctggatgacatcggcagcatgtttgatgacctggccgaccagctggatgccatgctg
gagtga
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integrated database retrieval system
