Lagopus muta (rock ptarmigan): 125702464
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Entry
125702464 CDS
T09141
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125702464 (SEC16A)
Membrane trafficking [BR:
lmut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125702464 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
125702464
NCBI-ProteinID:
XP_048821721
LinkDB
All DBs
Position
19:7839313..7866618
Genome browser
AA seq
2460 aa
AA seq
DB search
MQQPPQTVPAGAAAPPPAGIARNTYWRSTSLSKRANATAAPVQPVTDPFAFGRQTPQGFT
APLDNPSKGNALVMQSSSPAAFPQPAVVHASPAHVGDNPHGLHPSLPASVSQPGANSSTF
SNVPMPAPSPGYVTNSTADVHPNADLGLHGSAVPSHYNAGTALENSFSVHPGMVSMSNKP
GGRQDVSRDPSDVSSGPPATALFPPAPQQPVSQWRPVQGNLQSPVRNFVPYSEPHSQTDI
HNVSQSSVSTSHPPPQTNLQRGPVHQGVPQNAVQAPLAVGCEKNGKNGSANSGHHMNSFQ
PGNVFRQNTETTNAWLNQPYQEQFYPQTPLQDSSSVIPTAQENNLQKQSPGMSEASNRPI
PTDQDSGTLSMFFKGDEAENEEILSSEKNYMVEKPEFACQPHSSPLYHQPGHPQRAPANV
LSQAQMGTGSANEMIQKGMDVQYFPKILSQQEAQAAKQSMFVSDGKAGVGDAPGNGGSQY
ENVENLECIQNQEVLPSEPRNMNASSPSAHPDLYRYGSLPGQVLPKNAVVSHAEGGPNLE
APDSLAHPVRPDSVSSNYSNISHRSASSSARPQEQIGTFIQQESGKPDEESSACFFKQID
SSPLGDDSSEMNPNKSYHGNLSQPPTPSPPKPTGVFQTSANSSFEPVRSHGVGIKPAEID
QAKMVVELRENHPNQKNTKKGTAMPAASPGNLEQPPDNLETIFMPQVYPLPLAVSGEAGN
TLHSGPVTENMQSLSERRSSTRAQGAIKKCDSPATTLWAHNELPNFGGNVLLAPAAPAVY
VPAKQTVEVIQPPEEGLSNQQPTKPGSIAVQPSQDGNISSENLENPPKLGEEEALQSQAS
SGYASLLSSPPTESLQNQPILIAQPNQSYNLAQPINFSISLSNQLSSNENSQPMKDSRVG
DKPSVGPQTSHAGGIISGENALLPVMQVGSLLANAPPNSNLLKHNLLQSPVNSSDIASNQ
PANLLVKTPSNLAPEGQKNVNFEGFAPEFASKSGAYSSISPGMNLPSGNTSALLPPVNSV
VQTKNSVNRSNSKEEAAGVLDFTVSRTLEKSSASNSVQVHNQLLSGGPVHPQQPAGSAGQ
AGPEVRDKQHFYQQVTKDVQHQAVPDRAVQGALPSQPQMQAAQMPASSGQSSASSNYQTA
AGPRGTQASQQCENQEPRNQEASSAQLPSPDKQPGSGQPSAAVAPTAPATTGQPALPSAQ
QDLQRPPLPQTPQDAFGPPQNPYYYYRHPYDAYQPPYPPPYPPPDPRTAAHLYYLEDSYG
QYDPRYRYYDSSSTAYMEPSSYRYSEPERPSSRASHCSDRPSSRQGYPEDYYAKTGWADY
YPGYYPSTYDYGDPSRWERYSSAYDPRYRDPRSYDQRYLYDGEHNPYQKREAYPYSNRHD
RYEDRWRYDPRFTGSFDDETEPPRDPYGDEFDRRSVHSEHSGHSLRSSHSVHSHRSSFSS
RSQQSQLYRSNHDLTANVYETAAQAVPLHTDYPYGGYAPNFDGQQPFTDYGYPTETGWSA
VDQVPLRPLTPEKFSVPHLCARFGPGGFLIKVLPNLPSEGQPALVEIHSMETMMQHSPEQ
EEMRAFPGPLAKDDTHKVDVINFAQNKATQCFKNENLIDKESASLLWDFIVLLCRQNGTV
VGTDLAELLLRDHKTVWLPGKSPNEANLIDFTNEALEQVEEESGEAQLSFLTDSLITTID
SLEKETERFRELLLYGRKKDALESAMKHGLWGHALLLASKMDNRTHARVMTRFANSLPIN
DPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLTNNVDLESRTIATMGDTLAS
KGLLDAAHFCYLMAQVGFGVYTRKTTKLVLIGSNHSLPFLKFATNEAIQRTEAYEYAQSL
GTQPGCLPNFQVFKFIYACRLAEMGLAAQAFHYCEVISRTVLKDPQYYSPVLIGQLIQMS
SQLRLFDPQIKEKPDQESFVEPSWLVRLRHVDGQIKEGAIAYSTDRSTPQQYPCSTPSSE
LDHPSQYDGAGVGHDVGPGAENALLASLLPNMAQQMQSVQLMPSAPQAILDGSAAGIPPS
DQDAVQSVPFYPVASQPIGPGPGFAPPGFSNQYGAEPSPLYLGSTLPPGGPPQETEPQEE
EQMNLETGMQRIASESPSRNSFPEQREEDFYNRMARMAPERRSRSASQSSAYMGYGQRSR
TTSESSAHSVGRERSNSAAKQPPPSPPVPVGKETKKEVKKELASRKTGANWFRWLMGKGK
NEAHLPDDKNKSIVWDEKKQRWVNLDEPEEESKPPPPPPTGFPKVPQAAPSGPGGPPSAP
VNMFSRRAAGSRARYVDVLNPGGTKAGGAVPAPSDLFAPLAPMPIPANVFVPNAVPGDPQ
PVEGSGAAEQTPAANQTNPDPSAAVDQEYLNPAVVPPGSGLPVSNPDGFQPGELSRSSSM
SSLSREVSQHFNQPAPAPPSGEPSAGAVQFYNPSQFAQSPAVTGSSRPGRIGQRKYPTLK
NT seq
7383 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctccgcagactgttccagcaggagcagcagctccacctcctgcaggcatt
gctcggaacacgtactggagaagcacatcgctcagtaaacgagcaaatgcaacagctgcc
ccggtgcagcctgtgacagacccttttgcctttggcagacagactccgcagggttttact
gcccctttagataatccatccaagggcaacgcactggttatgcaaagttcttccccagcg
gcgtttccgcagccagccgttgtgcatgcttcgccagctcacgtaggggacaatcctcat
ggactgcatccgtcactgccagcttctgtatctcaaccaggagcaaacagcagtacgttt
tctaatgttccaatgcctgctccatccccaggatacgttacaaacagcactgcggacgtg
catccaaatgcggatctcggactccatgggtctgcagtaccgtcgcattataatgcagga
acagcacttgagaattctttcagtgtgcatcctggaatggtgtctatgtcaaacaagcct
ggaggtaggcaagatgttagcagagatccgagcgacgtttcttctggaccccctgcaaca
gcactcttccctccagctcctcagcagcccgtgtctcagtggagacctgttcaaggtaac
ctgcagtctccagttcgaaattttgtgccctattctgaaccacattctcagactgacatt
cataatgtttcccagtcttctgttagcacttctcatcctcctccgcagactaatttacag
cgtggtcctgtgcatcaaggagttccacagaatgctgtgcaagcgcctttagctgttggt
tgtgaaaaaaatgggaaaaatggctctgcaaatagtggtcatcacatgaacagcttccag
cctggaaatgtctttagacagaacacagaaacaacaaatgcttggttaaatcaaccttac
caggagcagttttacccacagacaccgttgcaagactccagctctgtcattcctacagct
caggaaaataacctccagaaacagtctccaggtatgtctgaagcatcaaatagacctatt
cctacagaccaagactcaggaaccctttccatgtttttcaaaggggatgaggcagaaaat
gaagaaatactttcatctgaaaaaaattacatggttgagaaacccgagtttgcttgtcaa
ccacattcatcacccttgtatcaccagccagggcatcctcagcgggctccagctaacgtt
ctctctcaggctcagatgggtacaggttcagccaacgagatgatacaaaaagggatggat
gtccagtattttcctaaaattctaagtcagcaggaggcacaggctgctaagcaatcaatg
tttgttagtgatggcaaagcaggtgtgggtgatgcacctgggaatggtgggtcacagtat
gaaaacgtggagaacttggagtgcatacagaaccaagaagtgctgccaagtgagccgcgt
aacatgaatgcttcatccccttctgctcatcctgatctgtacagatatgggtccttaccg
ggtcaggtgcttccgaagaatgctgttgtgagccatgctgaaggaggaccaaatctggag
gcacctgattcgttagctcatcctgtacgaccagatagtgtgtcttcaaactatagcaac
atcagccataggagcgcttctagctcagcaaggcctcaagagcagattggtacatttatt
cagcaagaaagcgggaagcccgatgaggaatcttctgcttgcttctttaaacagatagac
tcttctcctctgggagatgattcaagtgagatgaatccaaacaagagctaccatggtaac
ctgtcccagcctccaactccgagtcctcctaagcccacaggagtatttcagacgagtgca
aatagttcttttgagcccgtgaggtcccatggagttggtataaaacctgcagagattgac
caagcaaaaatggtggttgaattaagggagaaccacccgaaccagaagaacaccaagaag
ggtacagctatgcctgctgcatcacctggcaatcttgaacagccaccagataatctagaa
actattttcatgcctcaggtataccctctgcctctagcagtcagtggtgaagctggaaat
acattgcactctggacctgttacagaaaacatgcagtctttgtctgagagaaggtcctcc
acaagggctcagggagcaattaagaagtgtgatagcccagcaacaactctttgggctcac
aatgagttacctaattttggaggaaatgttcttctagctcctgctgctcctgcagtttat
gtacctgccaaacaaactgtagaagtaattcagccaccagaagaaggcctgtctaatcag
cagccaaccaaaccagggagtattgctgtgcagccttcccaagatggaaatatatcatct
gaaaatcttgagaatcctcccaaattgggagaagaagaggcgcttcagtctcaggcaagt
tctggttatgcaagtttgttgtcttctccacctacagagtctttgcaaaatcagcctatc
ctaattgctcagcctaatcaaagttataacttggctcagccaattaatttttctatttct
ctatctaatcagctaagcagcaatgagaacagtcagccaatgaaggattccagggttggg
gacaagccttcagttggtccccaaacatcacatgctggtggaatcatctctggggaaaat
gcactgttgcctgtgatgcaagttggatctctgttagctaatgctcctccaaatagtaat
ctgttaaaacataatttattacaaagccctgttaattcctctgatatcgcttctaatcag
cctgcaaacttgctcgtgaaaacaccatctaatttagctcctgaagggcaaaagaatgtt
aattttgaaggttttgctcctgaatttgctagcaagtcaggggcttattcatccatctct
cctgggatgaatcttcccagtggaaacacaagtgcattgcttccacctgttaattctgta
gtacagaccaaaaattctgtaaatcgttcaaatagcaaagaagaagctgctggagtgctt
gattttacagtgtcacggacgttggagaaaagcagtgcaagtaattccgtgcaagtgcat
aatcagctgctttctggtggtcctgtgcatcctcaacagccagctggcagtgctggtcaa
gctggtcccgaggtgcgtgacaaacaacatttctatcaacaggtgacaaaagatgtacag
catcaggctgtgccagacagagctgtacagggagcactgccatcccaaccacaaatgcag
gcagctcagatgccggcgtcttctgggcagtcctcagcttcttcaaactaccagactgca
gcagggccgagaggcacgcaggcgtcccagcagtgtgagaaccaggagcccaggaaccaa
gaggcaagttcagcacagctgcccagccccgataagcagccgggctctggtcagccctca
gctgctgtggctcccacagctcctgccaccaccggtcagccagcgctgccaagtgcacag
caagacctgcagcgtcctcccctgcctcagactcctcaggatgccttcggtccacctcag
aacccttattactactacagacatccttacgatgcttaccagcctccgtatccaccacct
taccctcctccagatcccagaacagcagctcatctgtattacctggaggatagctatgga
cagtatgacccacggtacaggtactacgacagcagcagcactgcttatatggagcctagc
agttaccggtattctgagcctgaacgtcctagctccagagctagtcactgctctgatagg
ccttcttctagacaaggatatcctgaagattattatgcaaaaactggatgggctgattat
tatccaggctattacccgagcacgtatgattacggagatccgagtcgttgggaacgttac
tcatcagcctatgaccccagatacagagatcctagaagttatgaccagaggtatttgtat
gatggtgaacacaacccttaccagaagagagaagcatacccatacagcaacagacatgac
cgatacgaggatcgttggagatacgatcctcgttttactggaagctttgatgatgaaact
gagcctcccagagatccttatggtgacgagttcgacaggcgcagcgttcacagtgagcat
tcaggtcacagcctgaggagctcccacagtgtgcacagtcaccggagcagcttcagctct
cgttcccaacagagccagctgtatagaagtaaccacgatttaacggctaatgtgtatgaa
actgctgcacaggcagtgccactgcacacagattacccgtatggtggatatgctcctaac
tttgatggacaacagccttttacagattatggctacccgactgaaactggatggtctgct
gtagatcaagtgcccttaaggcccttaacgcctgagaaattttcagtgcctcatctgtgt
gccaggtttggccctgggggcttcttaataaaagtgctgccaaacctgccttcagaagga
cagccagccctggttgaaatacacagcatggagactatgatgcaacattctccagagcaa
gaagaaatgagagcctttcctggtcctcttgctaaagatgacacccataaagtggatgtt
atcaattttgcacaaaataaagctacacaatgttttaaaaacgaaaatttaattgacaaa
gaatctgcaagtctgctttgggacttcattgtactgctgtgcaggcagaatgggactgtt
gtgggaacagacctggctgaacttctgctccgagaccataaaacagtatggcttcctggg
aagtcccctaatgaagcaaatttaattgatttcactaatgaggctttggaacaagtagag
gaggaatctggtgaagcccagctctcgtttctcactgatagtcttataaccacaattgat
agtcttgagaaagaaacagagaggttcagagagctgctgctttatggacgtaagaaggat
gctttggagtcagccatgaagcatggcttatggggtcatgctctgctacttgccagcaag
atggacaacagaacacatgcaagagtgatgaccaggtttgccaacagtctcccaattaat
gaccctctgcagactgtttaccagctcatgtctggaaggatgccagctgcatccacgtgc
tgtggagatgagaaatggggagactggaggccacatctagcaatggtgttatccaacttg
accaataacgtggacttggaatccaggaccattgctaccatgggagacactcttgcttct
aaaggcctgctggatgctgctcacttttgttaccttatggcccaagttggttttggagtt
tacacgaggaagacaacaaagcttgtcctaattggatcaaatcacagcttgccatttttg
aagtttgccaccaatgaagctattcaaagaacggaagcctatgaatatgcacagtcactg
ggaacccagcctggctgcttgcccaatttccaggttttcaaattcatctatgcttgccgc
ctagctgaaatgggacttgctgctcaggctttccattactgtgaagtgatttccagaact
gtccttaaagatccgcagtattattcacctgtacttattggccagctaatccagatgtca
tcgcagctgcgcctgtttgatccccagataaaagagaaacctgaccaggaatcctttgtt
gaaccttcatggttagtaaggcttcgacacgtggatggacagatcaaggaaggtgcaata
gcttacagcacagacagatccacaccacagcagtacccatgcagcacaccaagctctgaa
ttggaccatcccagtcaatatgatggagcaggagttggccacgacgtgggcccaggtgct
gaaaatgctttgttagcatctttgttgcccaacatggctcagcagatgcaaagcgtgcag
ctgatgccttcagctcctcaggctatacttgatgggtcagctgctgggattccacctagt
gaccaggatgctgtccaaagtgtccctttctatcctgtggcctctcagcctattgggcca
ggacctggctttgcacctccagggttttcaaatcagtatggagctgagccatcaccactg
tatttagggtcaacgctgccaccaggagggccaccacaagaaactgaaccacaggaagag
gagcagatgaacctggaaacaggaatgcagagaattgcctcagagtctccttcacgaaac
tctttccctgaacagagagaggaagatttctacaacagaatggctagaatggcaccagaa
cgaagatccagatctgcatctcagtcttcagcatatatgggctatggacaaagatcccgg
acaacttcagagtcctctgctcattctgtgggacgagagagatctaactctgcagcaaag
cagccacctccttctccacctgttcctgtagggaaggagactaagaaagaagtgaaaaaa
gagctagcatctagaaagactggtgcaaactggtttcgctggctgatgggaaaaggaaag
aatgaagctcaccttccagacgacaagaacaaatcaattgtttgggatgaaaagaagcaa
cgttgggttaatttggatgagccagaagaagagagtaagcctccaccaccacctccaaca
ggatttcctaaagttcctcaggctgctccatctgggcctggaggcccacccagtgcccct
gtcaacatgttctctagaagagcagcaggaagcagagcccgttatgttgatgttctgaat
ccaggtggaaccaaggcaggcggtgctgttcctgcaccatcagacctatttgcacctctg
gcaccaatgccaattcctgccaatgtatttgttccaaacgcagttccaggggaccctcag
ccagtggaaggcagtggtgcagcagagcaaacaccagctgcaaaccaaaccaacccagat
ccatctgcagctgttgatcaagagtatttaaaccctgcagtggttccacctggatctggg
cttcctgtttccaaccctgatggcttccaaccaggcgagctttcgcgctctagttcaatg
agttcattatcacgtgaagtaagccagcattttaatcagcctgcccctgcaccaccttcg
ggggagccatcagcaggagcagtacagttctacaatccttctcaatttgcacaatctcct
gcagtcactggaagttcaaggccaggaagaattgggcagaggaagtatccgacattgaag
tag
DBGET
integrated database retrieval system
