Enterobacter sp. SGAir0187: CWR52_12025
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Entry
CWR52_12025 CDS
T05333
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lni
Enterobacter sp. SGAir0187
Pathway
lni03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CWR52_12025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lni03400
]
CWR52_12025
Enzymes [BR:
lni01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CWR52_12025
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CWR52_12025
DNA repair and recombination proteins [BR:
lni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CWR52_12025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AVH17874
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All DBs
Position
complement(2494027..2494836)
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSDEIHALSDQPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRVLTEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHNVLAHLGPEPLSDAFNAEYLKAKCAKKKSPIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSAEECELLVRVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRVCGTPIIATKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggtagaaaccagccgtcgcggcattgagccccatctggtcggc
gcgacgattcttcacgcggttgtccgtaacgggcgtctgcgctggccggtgtccgatgag
atccacgccctgagcgatcaacccgtccttagcgtgcagcgtcgcgcgaaatacctgctg
ctggaactgcccgacggctggatcattatccacctggggatgtccgggagcctgcgcgtt
cttaccgaagaactgcctgcggaaaagcacgaccacgtcgatctggtgatgagtaacggc
aaagtgctccgttataccgacccacggcgctttggcgcgtggctgtggacgaaagagctg
gaagggcataacgtgctcgcgcatctgggcccggagccgctctcagacgcgtttaacgcg
gaatacctgaaagcgaagtgcgcgaaaaagaaaagcccgattaagccgtggctcatggat
aacaagctggtggtcggcgtggggaatatctatgccagcgaatcgctgtttgccgccggg
atccatcccgatcggctagcctcttcgctgtcggcggaggagtgtgagctgctggtccgc
gtgattaaagccgtattgctgcgctcgattgaacaggggggaacaacgctgaaggacttc
ctgcaaagtgacggcaagccgggctattttgcccaggagctgcaggtgtatggccgtaaa
ggcgaaccgtgcagagtctgcggtacgcccattattgccacgaagcacgcccagcgcgcc
acgttctactgccgtcagtgccagaaatag
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