Loa loa (eye worm): LOAG_05773
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Entry
LOAG_05773 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
loa
Loa loa (eye worm)
Pathway
loa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LOAG_05773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
loa03400
]
LOAG_05773
Enzymes [BR:
loa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
LOAG_05773
DNA repair and recombination proteins [BR:
loa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
LOAG_05773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
BRCT
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
9943181
NCBI-ProteinID:
XP_020302752
LinkDB
All DBs
AA seq
885 aa
AA seq
DB search
MSGSDETGEEAVENSDVSSGKEDEQEVETAAASSLEEEISRNFKYSTLCKYLDRIQQIHF
KNKFGKERVLKALVTKWTADASKFTNGAVSFYPVLRIMANSLDRRKFRMRSKRIISKVCQ
VLCLPPKTKKELLQIDSKSADQSILKLAEEISMRNPAVTKRELSLFDVNDSLCKITEQEI
SSAELEKLLKACATIREVYWLLQVLVRKIERSLKVTSANLVSWIHPNGAALYQSGVSLRK
ICDLIVEGKMTDNSSMLFRRFEPMLLSRIRHGSGDVYDKLVRFCGQEFYVELKYDGEHFL
LHRGPSCEMRYYSRVQNDFTNSIAPVLDHRINPYFAPSLESCILDTELLLWDTIDEVFVG
HNAQASDGRIYDVKALRTDGAVEPSVAVFDILFLNGKSLMDIPLSERIALLQSGNVLEKQ
DKTKIFVSNFTIVKTREEFASLYQEAVISGQEGVVAKKMDSVYKTGMRQMANGWFKIKPF
HLGNETLDLAIVGVDLGRNDKISNYCLATLRDNKFFIVGKVGTGLDDTTRTFLKNRLTRD
HGFFKSDRIPSWIHQDYISSDLPSHFVNQNNMQVVEIRAKGLRNDRLYAPTLKTYRDDKY
VKDIDQYQAFLDFDKNLRLDSIKNAQSVTNLKKRTTVVHVLEEYQTKKARIEEINQDLKG
KQICILRGTSDVNTQELQEIVISFGGIHVANPGPKTLFVVTGEPKHVKSKSIIKSNKYNV
VSADWLIACKNVSKILPVTRKEAIHVVDDSLYTLFGNDGTLENSTVPTSSTAYTIASVSV
LLDSIKVPKRKKPLAAEETLRKQLFMDEKFNRFCGQTFYLHDDLTKIQKMYAQILLQMHG
ADLSTKQSSAVTHIVVPDRKIAYDNLLKKTTVVDICWLENTLDML
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtagtgatgaaactggtgaagaagcggtagaaaacagtgatgtcagctccgga
aaagaagatgaacaagaagtggaaactgcagcggcaagcagtttggaagaagaaatttct
cgaaatttcaaatactcaacattatgcaaatacttagaccgtatacagcaaattcatttc
aaaaataagttcggcaaggaacgagtactgaaagcattagtgacaaaatggacggcagat
gcttctaaatttacaaatggagctgttagtttttacccggtcctacgtattatggccaat
tcattggatcgacggaaatttcgcatgagatcgaaaagaattatatcgaaagtatgccaa
gtattgtgtcttcccccaaagacgaaaaaggaattgttacagatagattccaagagtgca
gaccagtcgattttgaaactggcagaagaaatttcgatgcgaaatccagctgttactaaa
cgtgagctgtctctttttgatgtaaacgattcgctgtgcaaaataacagaacaagaaata
agtagcgcagaactagagaaacttttaaaagcctgcgcaacaatacgcgaagtctattgg
cttttgcaagtattggttcgtaaaattgaacgctccttaaaggtaacatccgcaaattta
gtaagctggatacatcccaatggagctgcattatatcagtctggcgtcagcttgcggaaa
atatgtgatcttattgtagaaggtaaaatgacagacaactcgagcatgcttttccgccgt
tttgaaccaatgttattatcaagaatcagacatggcagtggagatgtttacgacaagttg
gttcgtttttgtggccaagaattttatgtggaattgaaatatgacggtgaacacttcttg
ctgcatagagggccgagttgcgaaatgcgttattactcacgggttcaaaatgactttact
aattccatagcaccggtgctggatcataggatcaatccatattttgcgccttcgcttgaa
agctgcatactggatactgaattattgctttgggatactattgacgaagtattcgtcggc
cataatgcacaagcatcagatggtcgtatttatgatgtgaaagctctgagaacagatggt
gcagtagagccaagtgttgcagtatttgatattttatttttgaacggaaaatcactaatg
gatattccgctgagcgaaagaattgctcttcttcaaagtgggaatgttttggaaaagcag
gataagacaaaaatatttgtgtcaaacttcactattgtcaaaacgagagaagaatttgct
tcactataccaggaagctgtaataagtggtcaagaaggcgttgtggcgaagaaaatggat
tcggtgtataaaacgggtatgcgccagatggcaaatggttggtttaagataaaaccattc
catctgggtaatgaaacattggatcttgcaattgttggtgtcgatcttggcaggaatgat
aaaatcagtaattattgtttggctacgcttagagataataaattctttatcgtcggcaaa
gtaggaacaggattggacgacacgacacgtacatttcttaaaaatcgtttgacgcgagat
cacggattcttcaaaagtgacaggatcccaagctggattcatcaagattacatatcaagc
gatttaccaagtcatttcgtaaatcagaataacatgcaagttgttgagattcgagctaaa
ggattaagaaatgaccgactgtatgctccgactctaaagacttatcgagatgacaaatat
gtaaaagacatcgatcagtaccaagcatttttagactttgataagaacttacgtctagat
agtataaaaaatgcgcaaagcgtaacaaatctaaaaaaacgaacgacagttgtacatgta
cttgaggaatatcaaactaagaaagcacgcatcgaagaaataaatcaagatctgaaagga
aaacaaatttgtatcttaagaggtacctctgatgtaaacacgcaggaactgcaagagatc
gttatttcgtttggtggaattcacgttgctaatccaggtccaaaaacactttttgttgtg
accggtgagcccaaacatgtgaagtcaaaatcgattattaaaagtaataaatataatgtg
gtcagcgcagactggcttatagcatgcaaaaatgtgagcaaaatcttacctgtaacgaga
aaagaagctattcatgttgttgacgatagtctttatacgttatttggaaatgatggaaca
ttggaaaattccactgtgccgacgagctctactgcatatacaattgcaagtgtcagtgtt
ttgctggacagcataaaagtacctaagcggaagaaaccattagctgctgaggaaacactg
agaaagcagttatttatggatgaaaagtttaatcggttttgtggccaaacgttttattta
catgacgacttgacgaaaatccaaaaaatgtacgctcaaatcttactgcaaatgcacggt
gctgatttgagtacaaagcaaagcagcgctgttactcatattgtagttcctgacaggaaa
atagcgtatgataacctgctgaagaaaacgaccgttgttgatatctgttggttggaaaac
acgcttgatatgctgtaa
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