Lepisosteus oculatus (spotted gar): 102685893
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Entry
102685893 CDS
T07349
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102685893 (chd9)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102685893 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
102685893
NCBI-ProteinID:
XP_015223957
Ensembl:
ENSLOCG00000007225
LinkDB
All DBs
Position
LG23:complement(14547310..14600623)
Genome browser
AA seq
2484 aa
AA seq
DB search
MSSVKRPRGRPPSSKNTNGSSGHTRVLSPQLKSGTSSSSSSSSSSSEKRQKKKPLMEQAL
EDKQEKANRIISEAIAKARERGEKNIPRVMSPESFPCSSTPPRQDHKPHHAKAPPTDPPS
RKAKGPAASRSKQKTKIGKIVIKFGKKKKRKTESSEELSDTEPLPRRCSKDDDSKRRSNR
QVKRKKYAEEGECKVSDEEVKVIVKAKKTASGSRKEQPVQLFVENPSEEDAAVVDKIMSS
RIGKKEVSPGVVVEVEEFYVKYKNYSYLHCEWATEQQLVKDKRIQQKIKRFKIKQAQRAH
FFADMEEEPFNPDYVEVDRVLEVSYCKDKDTGEVTLTHSPCYPPQGGEFQKCLHDNKKPV
VYYLVKWCSLPYEDSTWELKEDVDQSKIEEFEQLQAARPDPRRVERPPASMWKKTEQSRE
YRNGNRLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIFLTGIRGPFLI
IAPLSTIANWEREFRTWTDLNVIVYHGSMVSRQMLQQYEMYFRDSQGRVIRGAYKFHAIV
TTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTV
EELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPK
EETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA
EEKILEEFREVHNPAALDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDI
LEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTC
IIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQS
MSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIE
SEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDLDTINGRNSLVIDTPRVRKQ
TRPFSATKDELAELSEPESEGDDKPKLRRPYDRLNGYGRTECFRVEKNLLVYGWGRWKDI
LLHGRFKRQLNEHDVEIICRALLAYCLVHYRGDDKIKSFMWDLIAPTEDGQTKELQNHLG
LSAPVPRGRKGKKVKTQPSSFDIQKAEWIRKHNPEHLLQDDGYKKHLKHHCNKVLLRVRM
LYYLKQEVIGDQSQKVLDGVDSSETEIWVPEPDHSELPAHWWDTEADKSLLIGVYKHGYE
KYNTIRADPALIFLERVGRPDDKAIAAEQRANDFMDGDGDDPEYKPAPALLKDDIEDDAS
SPGDLVIADGGGEGGMLMEGDALYWPPPSALTTRLRRLITAYQRNTKNRQIQHIQQALPA
QPSALLSTLNDNINPKIAAKIERQQRWTRREEADFYRVVSTFGVVFDPEQGRFDWTKFRA
MARLHKKTDDSLQKYLCAFTAMCRRVCRLPPREGESVDPSISIQPITEERASRTLYRIEL
LRKVREQVLRHPQLYERLQLCQPGPDLPVWWEPGAHDRDLLIGAAKHGVSRTDYHILRDP
ELCFMTAQSNYSQNKGAQSRTPTPLLLPQYQAMVAGSPLAAQPRPPDPRTAQVEEPRQRA
EHLKEEPPTSEEEGAERKGKAEQWSPRSGAQTQGLVDSKAGGQVKGESERRSMVAARTEP
LTPNSVAKKQKRGSKRGRRQGRRASCTDSDTERSSSCSSSRSSSSSSSSSSSSSSCSRSG
SSSSSSSSSCSSGSSSSSSSSSSSSSEDSDSDREDRKASVAEAAKIKGFDEDSVASLSTT
QDETQDSFLTDNGLHSSSHAFQGGYMLAASYWPKDRVMINRLDSICQAVLKGAWPAARRG
YEGSAVSSFYTTKLLDSPSDQGGPPGPREDPAQSPQMSKVKKHVREKEFTVKINDQEGSL
KLTFQKQGLPQKRPLEGEDGPLGQQQYLARLRELQSASDTSLADFTKPLPTAAGAAGPVR
ANGALDGQPVVKKRRGRRKNVEGMDLLFLNKNRSTPDHVGPGVGGSAQASPAVVPGLGYG
PSQAPVDTESRVPVINLKDGTRLAGDDAPKKKDLEQWLKEHPGYVADVGAFIPGLNKMTF
QDGRPRQKRHRCRNPNKIDINSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLKENPE
YGVPPEWADVVKRSGFLPESMFDRILTGPIVREEVSRRGRRPKSEMAKAAAAAANASAAT
LSINPLLSNGLLSGMDLSSLQALQQNLQSLQSLHLTAGLMGLPGGLAAAGDANNLAAMFP
MMLSGMAGLPNLLGMGGLLGKPQEGAGVSEDGTKKGNGGSGDSSSSASKTPVPTDTKGER
TEGQGADQCPSDPSTSGATAPLSASAVAAAAASSNHPLALNPLLLSSMLYPGMLLTPGLN
LPISALSQSGVFDAQQQSTSARPAATASGETPRGAGGSTPAKGQEPGEQKENSAEEGSEK
AGSSSSESEGSSSSSEDSDSSNED
NT seq
7455 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtgaagaggccaagaggaaggcccccttcctccaagaacactaatggttcc
agtggacacacaagggtcctcagccctcagctgaagagcggcacctcgtcctcctcctcc
tcctcttcctcgtcgtcggagaagaggcagaagaagaagccgctgatggagcaggcgctg
gaggacaagcaggagaaggccaaccgcatcatctcggaggccatagccaaggcgcgggag
cgcggggagaagaacatcccgcgcgtcatgagccccgagagcttcccctgctcctccacg
ccgccgcggcaggaccacaagccccaccacgccaaggccccgcccacagacccgccctcg
aggaaggccaagggccccgccgcctcccgatccaaacagaagaccaagatcggcaaaata
gtcatcaagtttggcaagaagaagaaaaggaagaccgagtcctccgaagagctgtcggac
acggagccccttccgcggcgctgctccaaggacgatgactcgaaaagaagatctaaccgt
caggtaaaacgcaaaaaatacgcagaggagggggagtgcaaggtttcagacgaggaggtc
aaggtgatcgtcaaagccaagaagacggcctcgggttcgcgcaaggagcagcccgtgcag
ctgtttgtggaaaatcccagtgaggaagatgccgcagtggtagacaaaatcatgtcttcc
cgcataggaaagaaggaggtgtctcctggggtcgtggttgaagttgaagagttttacgtc
aaatacaaaaactactcgtatttgcattgcgaatgggccactgagcagcagcttgttaag
gacaagaggatccagcagaagatcaaacgattcaagataaaacaggcacagagggctcac
ttctttgcagatatggaagaggagccttttaaccccgactacgtggaggtggaccgagtg
ctggaagtctcctactgcaaggacaaggacactggagaggtaacactgacacactctccc
tgttatccaccccagggcggagagtttcagaagtgtttgcatgataataaaaaacctgtg
gtgtattacctggtgaagtggtgctccctgccctatgaggacagcacctgggagctgaag
gaggatgtggaccagagcaagatcgaggagtttgagcagctgcaggcagcccggccagac
ccgcgcagagtggagcgaccccccgccagcatgtggaagaagacagagcagtcccgggaa
taccgcaatgggaaccggctcagggactatcagctggagggagtgaactggctcctgttc
aactggtacaacagacggaactgcatccttgctgacgaaatgggtcttggcaaaaccatc
cagtccatcacattcctggaggagatcttcctgacgggcatccgcggaccattcctcatc
atcgcgccgctgtccaccatcgccaactgggagagggagttccgcacctggacagatctg
aatgtcattgtctatcatggcagcatggtcagccgccagatgctccagcagtacgagatg
tacttcagggactctcagggccgagtgatccgcggggcttacaagttccacgcgatcgtc
accaccttcgagatgatccttggcggctgtcccgagctcaacgccatcgagtggcgctgt
gtcatcatcgacgaggcgcaccggctgaagaacaagaactgcaagctgctggagggcttc
aagctcatgagcctggagcataaggtactgttgacaggcactcctcttcagaacacggta
gaggagctctttagcctgctgcacttcctggagcccttgcggttcccttcagagtccacc
ttcatgcaggagttcggggatctgaagacggaagagcaggtccagaagctccaggccatc
ctgaagcccatgatgctgcggcgcttgaaggaggacgtggagaagaagctggcgcccaag
gaggaaaccatcattgaggtggagctcaccaacatccagaagaagtactaccgggccatt
ctggagaagaacttctccttcttgtcgaagggcgctggccaggccaatgtgcccaacctc
gtcaacaccatgatggagctgcgcaaatgctgcaaccacccctacctcatcaaaggggcg
gaggagaagatcctggaggagtttcgggaggtgcacaaccccgcggcgctggacttccac
ctgcaggccatggtgcagtccgccggcaagctggtcctcatcgacaagctgctgcccaag
atgaaggcgggtggccacaaggtcctcatcttctcccagatggtccgctgcctggacatc
ctggaggactacctcatccagaggaggtacctctatgagcggatcgacgggcgggtgcga
gggaacctccggcaggcggccatcgaccgcttcagcaagcccgactcggaccgcttcgtc
ttcctgctgtgcacgcgggcaggggggctgggcatcaacctgaccgccgccgacacctgc
atcatcttcgactccgactggaacccgcagaacgacctgcaggctcaggctcgctgccac
cggatcgggcagaacaaggctgtgaaggtgtaccggctcatcacccggaactcgtacgag
cgcgaaatgttcgaccgcgccagcctgaagctgggcctggacaaggctgtcctacagagc
atgagcgggcgcgagaacagcgtgggcggtatccagcagctttccaagaaggagatcgag
gacctgcttcgtcggggggcatacggggccattatggatgaggaagatgagggctccaaa
ttctgtgaggaagatatcgaccagatcctccagcgcagaaccaagaccatcactattgag
tctgagggcaggggctccacctttgccaaggccagttttgtggcatccggaaacaggaca
gacatttctctggatgatccaaatttctgggacaagtgggcaaaaaaggcagagattgac
ctggacactatcaatggcagaaacagcctcgtgatcgacacgccgcgggtcaggaagcag
acccgccctttcagcgccacaaaggatgagctggcggagctgtcggagccggagagcgag
ggggacgacaagcccaaactccgccgcccgtacgacaggctcaatggctacggccgcacc
gaatgtttccgcgtggaaaagaaccttctggtttacgggtggggccggtggaaggacatc
ctcttgcacgggcgtttcaagaggcagctgaacgagcacgacgtggagataatctgccgg
gctctgctggcctactgcctggtgcactaccgcggggatgacaaaatcaagagcttcatg
tgggacctgatcgcgcccacagaagacggccagaccaaggagctgcagaaccacctgggt
ctgtctgctccagtgccccgagggcggaaggggaagaaggtgaagacgcagccaagctcc
ttcgacatccagaaggcggaatggatcaggaagcacaatccggagcacctcctccaagac
gacggttacaagaagcacctcaaacaccactgcaacaaggtgctgctccgtgtccgaatg
ctgtactacttgaaacaggaagtgataggagaccagtcccagaaggtgctcgacggtgtg
gactccagcgagacagagatttgggttcctgagccagaccactcggagcttccagctcac
tggtgggacacagaagcggacaagagcctccttattggcgtttataagcatgggtacgag
aagtacaacaccattcgagcggaccccgccctcatcttcctagagcgcgtggggcggccg
gacgataaggccatcgccgcagagcagcgggccaacgacttcatggatggggacggcgat
gacccagaatacaagccagctccagccctgctgaaagacgatatcgaggatgatgcctcg
tcccctggagacctggttattgcagatggtggaggagaaggggggatgttaatggaagga
gacgccttgtactggcccccaccctcagccctgaccacacggctgcgccggctcatcacc
gcctaccagcgcaacaccaagaaccgccagatccagcacatccagcaggccctgccggct
cagcccagtgccctgctgtccaccctcaacgacaacatcaaccccaagatagccgccaag
atcgagcggcagcagaggtggacacggcgggaggaggccgacttctaccgcgtggtgtcg
acgttcggtgtggttttcgacccggagcagggccgcttcgactggaccaagttccgggcc
atggcgcggctgcacaagaagaccgacgacagcctgcagaagtacctgtgcgccttcacg
gccatgtgccgccgcgtgtgccggctgccgcccagggaaggggaatcggtggacccctcc
atctccatccagcccatcacagaggagcgggcgtcgcgaacgctctaccggatcgagctt
ctgcgcaaggtccgggagcaggtgctgcgccacccccagctgtacgagcggctccagctg
tgccagccgggcccggacctgccggtgtggtgggagcccggcgcgcacgaccgggacttg
ctcatcggtgccgccaagcacggggtgagccgcaccgattaccacatcctgcgcgacccc
gagctctgcttcatgacggcccagagcaactacagccagaacaagggggcccagtcccgc
acccccacccctctcctgctcccccagtaccaggccatggtggcggggtcccccctcgcc
gcccagccccggccgcccgaccccaggacggcccaagtggaggagcccaggcagcgggcg
gagcacttgaaggaggagccgcccacgtccgaggaggagggggcggagcggaagggcaag
gcggagcagtggagccccaggtcgggggcccagacccagggcttggtggacagcaaagcc
ggggggcaggtgaagggcgagagcgagcggcgcagcatggtggctgccaggacggagccg
ctgacgcccaactcggtcgccaagaagcagaagcgaggcagcaagcgggggcggaggcag
ggccggcgggcttcctgcacggactccgacacggagcgctcgtcctcctgctcctcctct
cgctcctcgtcgtcctcctcctcgtcttcctcctcctcttcctcgtgctcccgctctggg
tccagctcctcgtcttcctcttcctcctgctcctccggctcctcctcctcctcttcgtcc
tcctcctcctcctcttccgaggacagtgacagcgacagggaggacaggaaggcgagtgtt
gcggaggcagcgaagatcaagggttttgacgaagatagcgtggcgtctctcagcaccacc
caggacgagacacaagacagcttcctcactgataacggcctgcacagctcctcccatgcc
tttcagggcgggtacatgctggctgcctcctactggccaaaggaccgggtcatgatcaac
cggctggacagcatctgccaggcagtgctgaagggggcgtggcccgcggcgcggaggggc
tacgagggcagtgccgtgtcctccttttacaccaccaagctcctggacagccccagcgac
caggggggcccgcccggcccccgagaggaccccgcacagtcgcctcagatgtcaaaggtg
aagaagcatgtacgagaaaaggagtttacagtgaaaatcaatgaccaggaaggtagcttg
aagctgactttccagaagcagggcctccctcagaagaggcccctggagggcgaagacggg
ccgctggggcagcagcagtacctggcccggctccgggagctgcaaagtgcctccgacacc
agcctggccgacttcaccaaacccttgcccactgccgccggggccgcgggcccggtgcgt
gccaacggtgccctggacggccagcccgtggtgaagaagagacgcggcaggcggaagaat
gtggaaggcatggacctcctcttcctgaacaagaacagatccactcctgaccatgtcggt
ccgggagtcgggggcagcgctcaggccagtcctgctgtggtccctgggctggggtacggg
cctagccaggcaccggtggacacggagagcagggtgcctgtcattaacctgaaggatggg
actcggctagctggcgacgacgcccccaagaagaaggacctggagcagtggctgaaggag
caccctggatacgtggccgacgtgggagcgttcatccccggtctgaacaagatgacgttt
caggacggcaggccgaggcagaagaggcatcggtgtcgcaaccccaataaaatcgacatc
aacagcctgaccggcgaggagagggtgcagatcatcaacaggaggaacgccagaaaggtg
ggcggtgcctttgcccctcctctgaaggacctgtgccggttcttgaaggagaacccggag
tatggcgtgcccccggagtgggccgacgtggtgaagcggtcgggcttccttccagagagc
atgtttgaccggatcctgacgggaccgatcgtgcgtgaggaagtgagccggagagggcga
cggcccaagagtgagatggccaaggcggcggcggcagcagcgaacgccagcgccgcgacc
ctttccatcaaccccctgctgtccaacggcctgctttcggggatggacctgtccagtctg
caggccctccagcagaaccttcagagcctgcagtccctgcatctcactgccggtctcatg
gggctgccagggggactggccgccgcaggggacgccaacaacctcgccgccatgtttccc
atgatgctctcgggcatggccggcctgccgaacttgctgggtatgggcggcctgttgggc
aagccccaggaaggagctggggtctcggaggacggcacgaaaaagggaaacggcggcagc
ggcgactcttcctcctcggcttctaagacgcccgtgcctacagacacgaaaggcgaaagg
acagaaggtcaaggcgctgaccagtgcccgagtgacccttcaacctcaggcgccaccgcg
cccctaagtgcttcagctgtggctgctgcggctgcttcctctaaccacccgttagctctt
aaccccttgttactctccagtatgctgtatccagggatgcttctcactccaggccttaat
cttcccatttccgcgttgtctcagtccggcgtgttcgacgcgcagcaacagagcacgagt
gcccgcccggccgccaccgcctcaggggagaccccgcggggggccggcgggagcacgccg
gccaagggccaggagcccggcgagcagaaggagaacagtgccgaggagggctcggagaag
gccgggtcttcgtcgtccgagtccgaaggctcctcctcgtcgtcggaggactcggactcc
agcaacgaagactga
DBGET
integrated database retrieval system
