Lepisosteus oculatus (spotted gar): 102687715
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Entry
102687715 CDS
T07349
Symbol
col21a1
Name
(RefSeq) collagen alpha-1(XXI) chain
KO
K16629
collagen type XXI alpha
Organism
loc
Lepisosteus oculatus (spotted gar)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
102687715
NCBI-ProteinID:
XP_015218523
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Position
LG16:complement(18981451..19041298)
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AA seq
968 aa
AA seq
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MCSMAHKTKLLKLILQSLPVMLLHSFCTAQDEDRRYSCRTAPSDLVFILDGSWSVEDKNF
AIVKKWLVNITTNFNIGQRFTQVGVIQYSDDPVLQIPLGTYLSSTELIEAMESIEYMGGN
TRTGIAIKFAIDNLFAHSERGPNGVAKIAVVLTDGKSQDEVKLAAEEARKKGIILFAIGV
GSETEEEELRAIANKPSSTYVFYVEDYIAITKIREVIRQKLCEETVCPTRIPVAARDEKG
FDILIGLDFAKKAKRTKGSYSGSRAYLVTSRLDLTESTRAIFPDGLPPSYVFVATLKYKG
SVTTETWDLWRIQALDGTPQMAVTLNGKDKTVMFTTTSMGNDTQTVTFSTQETEKLFDEH
WHQIRLLVSEQSVTLYVDGQQTESLELGPAPGIFVNGKTQVGKYFRKEETIPFEIQKLRI
YCDPEHNNRETSCEIPGTDGECAINPGDIDIESTPAPCICPPGQPGPPGLKGEQGRAGEA
GQPGQPGADGKPGAPGLSGNPGLQGTAGIQGPRGAQGYKGEPGKPGDPGQRGMPGVPGLS
GLLGEKGAQGQKGEAGLPGINGQTGEKGNKGSAGPAGLPGLPGQPGRNGLDGAPGSPGQK
GEIGKPGIPGVDGLRGHPGHPGLPGNDGIRGPKGDDGIQGEKGAKGSAGLPGEMGLSGAP
GSPGLPGLKGSKGERGQLGQPGPPGTQGNSGEPGMAGQPGHSGMPGMKGSKGSKGNEGES
GRQGSKGEKGDSGRAGTQGLSGVPGSKGEKGAPGEPGLRGQAGHRGEPGQPGQPGSAGPR
GPNGAAGASGPPGPAGRPGRELSEEFIRQICRDVLRTEIPSLLHSGRIRGCDQCQTREGS
PGLPGPSGSQGPRGLPGLPGTDGSQGRPGAPGLPGTPGAKGEPGDKGEKGNSGRGEPGPE
GPPGPAGLMGPPGIGKPGYPGKPGLPGHPGDRGHHGSPGAPGQPGSCDPSLCYGVMVGRD
PFRKGPNY
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtatggctcacaaaacaaagctcttgaaattaatcttacagtcattgccagtt
atgctacttcacagcttttgcacagcacaagatgaagatcggagatatagttgcagaaca
gctcctagtgatctagtgtttattttagatggctcttggagtgtggaagacaaaaacttt
gccatagtcaaaaaatggcttgtgaacatcactaccaacttcaatatcggccagaggttt
acccaggtgggggtaatccagtacagtgatgaccctgtgttgcagattcctctgggaaca
tatttgtcaagcacagaactaattgaggccatggagtcaatagagtacatgggaggaaac
accaggacaggaatcgccatcaagtttgccattgataatttgtttgctcactctgaacga
gggcccaacggcgtagcaaagatagctgtggtcctcactgatggaaaatcccaggatgaa
gtgaaactggcggcagaggaagcaaggaaaaagggaatcatcttgtttgccattggtgtc
ggatccgaaacggaggaagaggagctaagggctattgccaacaagccttcttccacttat
gtgttttatgttgaagactacatagcaattactaaaatccgtgaagtgataagacagaag
ctctgtgaagaaacggtttgtccaacaagaatcccagtagcagcccgtgatgaaaagggc
tttgatatactgattggcttagacttcgccaagaaagctaaaaggaccaaaggatcttat
tctggtagcagagcctatctggtgacatcacgacttgacttaactgaaagcacaagagcc
atatttcctgatggcctacctccttcttatgtctttgttgccacactgaaatataaagga
tccgtgacgacggagacatgggatctctggaggatacaagctctggacgggacaccacag
atggcagtcacattaaatggcaaagacaagacagtaatgttcaccaccaccagcatggga
aacgacacacaaaccgtgacgttttcaacacaagaaacagagaaactctttgatgaacac
tggcaccagattcgccttctggtatcagagcaaagcgtcactttgtatgttgatggccag
cagaccgagtccttggaactgggtcctgcccctggtatctttgttaatggaaagacgcaa
gttggaaagtatttcaggaaagaagaaaccataccttttgagatacagaaactcagaatc
tactgtgaccctgagcacaacaatcgtgaaacatcctgtgaaatacctggaacggatgga
gagtgtgcaatcaatcctggagatattgatattgagtcaactccagctccttgcatatgc
cctcctggacaacctgggccgcctggcttgaagggagaacaaggaagagccggagaagca
gggcagcctggtcagcctggagctgatggtaagcctggggcaccaggactgtcagggaac
ccagggcttcagggtacagcaggcattcagggaccacgtggggcccagggatacaaagga
gaaccaggaaagcctggcgatccgggtcaaagggggatgccaggagtaccagggctgtca
ggtctgctgggagaaaagggtgctcagggccaaaaaggagaagctggactgcctggcatc
aatgggcaaactggagaaaaaggaaacaaaggatcggcagggcctgctggtctcccagga
ctccctggacagcccggccgaaatggactagacggagcaccaggaagtccaggtcaaaag
ggtgaaattggaaaacctggaatccctggtgtagatgggcttcgtgggcatccaggtcac
cctggtttgccaggaaatgatggtataaggggacctaagggtgatgatggaatacaagga
gaaaagggagcaaaggggtctgccggattgcctggagagatggggttatctggtgcaccc
ggctcaccaggattaccaggattaaagggcagtaagggtgaaagggggcagctggggcag
ccaggacctcctgggacacagggaaactcaggtgaaccaggaatggctggccaaccgggg
cattcaggaatgccagggatgaaaggaagcaagggatccaaaggaaatgaaggggaaagt
ggaagacagggctcaaagggagaaaagggagactcaggaagagcagggacccaggggtta
tccggtgtacctggatcgaaaggggagaaaggggcacctggagaacctggcctgagaggt
caagctggtcaccggggggagcccggccagcctggccagcccggttctgctgggccgaga
ggaccaaacggagctgcgggagcatcagggccacccgggcctgcagggcgacccgggaga
gagctttcagaagaattcatccgccaaatttgtagagatgtcttaagaacggagatcccc
tctcttctccacagcggccggatacgcggctgtgaccagtgccagaccagagagggctct
ccgggcctcccaggtccctcggggtcgcagggccccaggggtctccctgggctcccggga
acggacggatcgcagggccgtccgggagcacctgggctccccggcactcctggcgctaaa
ggagagccgggcgataagggcgaaaagggcaactcaggacggggggagccagggcctgag
gggccccctggaccagccggtctgatgggtcctcctgggataggaaagccaggctatcct
gggaaacccggccttcctggacatcctggagatcggggacaccatgggagccccggggcc
cccggacagccaggatcctgcgacccctctttgtgttatggtgtgatggtgggaagagat
cctttcaggaaaggaccaaattattga
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