KEGG   Lepisosteus oculatus (spotted gar): 102687715
Entry
102687715         CDS       T07349                                 
Symbol
col21a1
Name
(RefSeq) collagen alpha-1(XXI) chain
  KO
K16629  collagen type XXI alpha
Organism
loc  Lepisosteus oculatus (spotted gar)
SSDB
Motif
Pfam: Collagen VWA VWA_2 Laminin_G_2 Laminin_G_3 Laminin_G_1
Other DBs
NCBI-GeneID: 102687715
NCBI-ProteinID: XP_015218523
LinkDB
Position
LG16:complement(18981451..19041298)
AA seq 968 aa
MCSMAHKTKLLKLILQSLPVMLLHSFCTAQDEDRRYSCRTAPSDLVFILDGSWSVEDKNF
AIVKKWLVNITTNFNIGQRFTQVGVIQYSDDPVLQIPLGTYLSSTELIEAMESIEYMGGN
TRTGIAIKFAIDNLFAHSERGPNGVAKIAVVLTDGKSQDEVKLAAEEARKKGIILFAIGV
GSETEEEELRAIANKPSSTYVFYVEDYIAITKIREVIRQKLCEETVCPTRIPVAARDEKG
FDILIGLDFAKKAKRTKGSYSGSRAYLVTSRLDLTESTRAIFPDGLPPSYVFVATLKYKG
SVTTETWDLWRIQALDGTPQMAVTLNGKDKTVMFTTTSMGNDTQTVTFSTQETEKLFDEH
WHQIRLLVSEQSVTLYVDGQQTESLELGPAPGIFVNGKTQVGKYFRKEETIPFEIQKLRI
YCDPEHNNRETSCEIPGTDGECAINPGDIDIESTPAPCICPPGQPGPPGLKGEQGRAGEA
GQPGQPGADGKPGAPGLSGNPGLQGTAGIQGPRGAQGYKGEPGKPGDPGQRGMPGVPGLS
GLLGEKGAQGQKGEAGLPGINGQTGEKGNKGSAGPAGLPGLPGQPGRNGLDGAPGSPGQK
GEIGKPGIPGVDGLRGHPGHPGLPGNDGIRGPKGDDGIQGEKGAKGSAGLPGEMGLSGAP
GSPGLPGLKGSKGERGQLGQPGPPGTQGNSGEPGMAGQPGHSGMPGMKGSKGSKGNEGES
GRQGSKGEKGDSGRAGTQGLSGVPGSKGEKGAPGEPGLRGQAGHRGEPGQPGQPGSAGPR
GPNGAAGASGPPGPAGRPGRELSEEFIRQICRDVLRTEIPSLLHSGRIRGCDQCQTREGS
PGLPGPSGSQGPRGLPGLPGTDGSQGRPGAPGLPGTPGAKGEPGDKGEKGNSGRGEPGPE
GPPGPAGLMGPPGIGKPGYPGKPGLPGHPGDRGHHGSPGAPGQPGSCDPSLCYGVMVGRD
PFRKGPNY
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgtgcagtatggctcacaaaacaaagctcttgaaattaatcttacagtcattgccagtt
atgctacttcacagcttttgcacagcacaagatgaagatcggagatatagttgcagaaca
gctcctagtgatctagtgtttattttagatggctcttggagtgtggaagacaaaaacttt
gccatagtcaaaaaatggcttgtgaacatcactaccaacttcaatatcggccagaggttt
acccaggtgggggtaatccagtacagtgatgaccctgtgttgcagattcctctgggaaca
tatttgtcaagcacagaactaattgaggccatggagtcaatagagtacatgggaggaaac
accaggacaggaatcgccatcaagtttgccattgataatttgtttgctcactctgaacga
gggcccaacggcgtagcaaagatagctgtggtcctcactgatggaaaatcccaggatgaa
gtgaaactggcggcagaggaagcaaggaaaaagggaatcatcttgtttgccattggtgtc
ggatccgaaacggaggaagaggagctaagggctattgccaacaagccttcttccacttat
gtgttttatgttgaagactacatagcaattactaaaatccgtgaagtgataagacagaag
ctctgtgaagaaacggtttgtccaacaagaatcccagtagcagcccgtgatgaaaagggc
tttgatatactgattggcttagacttcgccaagaaagctaaaaggaccaaaggatcttat
tctggtagcagagcctatctggtgacatcacgacttgacttaactgaaagcacaagagcc
atatttcctgatggcctacctccttcttatgtctttgttgccacactgaaatataaagga
tccgtgacgacggagacatgggatctctggaggatacaagctctggacgggacaccacag
atggcagtcacattaaatggcaaagacaagacagtaatgttcaccaccaccagcatggga
aacgacacacaaaccgtgacgttttcaacacaagaaacagagaaactctttgatgaacac
tggcaccagattcgccttctggtatcagagcaaagcgtcactttgtatgttgatggccag
cagaccgagtccttggaactgggtcctgcccctggtatctttgttaatggaaagacgcaa
gttggaaagtatttcaggaaagaagaaaccataccttttgagatacagaaactcagaatc
tactgtgaccctgagcacaacaatcgtgaaacatcctgtgaaatacctggaacggatgga
gagtgtgcaatcaatcctggagatattgatattgagtcaactccagctccttgcatatgc
cctcctggacaacctgggccgcctggcttgaagggagaacaaggaagagccggagaagca
gggcagcctggtcagcctggagctgatggtaagcctggggcaccaggactgtcagggaac
ccagggcttcagggtacagcaggcattcagggaccacgtggggcccagggatacaaagga
gaaccaggaaagcctggcgatccgggtcaaagggggatgccaggagtaccagggctgtca
ggtctgctgggagaaaagggtgctcagggccaaaaaggagaagctggactgcctggcatc
aatgggcaaactggagaaaaaggaaacaaaggatcggcagggcctgctggtctcccagga
ctccctggacagcccggccgaaatggactagacggagcaccaggaagtccaggtcaaaag
ggtgaaattggaaaacctggaatccctggtgtagatgggcttcgtgggcatccaggtcac
cctggtttgccaggaaatgatggtataaggggacctaagggtgatgatggaatacaagga
gaaaagggagcaaaggggtctgccggattgcctggagagatggggttatctggtgcaccc
ggctcaccaggattaccaggattaaagggcagtaagggtgaaagggggcagctggggcag
ccaggacctcctgggacacagggaaactcaggtgaaccaggaatggctggccaaccgggg
cattcaggaatgccagggatgaaaggaagcaagggatccaaaggaaatgaaggggaaagt
ggaagacagggctcaaagggagaaaagggagactcaggaagagcagggacccaggggtta
tccggtgtacctggatcgaaaggggagaaaggggcacctggagaacctggcctgagaggt
caagctggtcaccggggggagcccggccagcctggccagcccggttctgctgggccgaga
ggaccaaacggagctgcgggagcatcagggccacccgggcctgcagggcgacccgggaga
gagctttcagaagaattcatccgccaaatttgtagagatgtcttaagaacggagatcccc
tctcttctccacagcggccggatacgcggctgtgaccagtgccagaccagagagggctct
ccgggcctcccaggtccctcggggtcgcagggccccaggggtctccctgggctcccggga
acggacggatcgcagggccgtccgggagcacctgggctccccggcactcctggcgctaaa
ggagagccgggcgataagggcgaaaagggcaactcaggacggggggagccagggcctgag
gggccccctggaccagccggtctgatgggtcctcctgggataggaaagccaggctatcct
gggaaacccggccttcctggacatcctggagatcggggacaccatgggagccccggggcc
cccggacagccaggatcctgcgacccctctttgtgttatggtgtgatggtgggaagagat
cctttcaggaaaggaccaaattattga

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