Lepisosteus oculatus (spotted gar): 102688141
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Entry
102688141 CDS
T07349
Name
(RefSeq) zinc-binding protein A33-like isoform X1
KO
K12012
tripartite motif-containing protein 35
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102688141
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102688141
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
zf-Nse
DUF3450
Peptidase_M15_2
DUF3958
JIP_LZII
Motif
Other DBs
NCBI-GeneID:
102688141
NCBI-ProteinID:
XP_006625852
Ensembl:
ENSLOCG00000016064
LinkDB
All DBs
Position
LG1:21698890..21858419
Genome browser
AA seq
475 aa
AA seq
DB search
MSTRSYLLEEELSCPVCFDIFKDPVLLTCSHSFCKACLELFWEERCSQDCPVCRRRSSKF
RPPTNLALKNITKTFLKEKYSRHPARAEVLCCLHQEKLKLFCMDDQELLCAVCQTSINHE
NHTLRPLQEAAQIYKNQLQTALDPLKEKLESFRKMKQTYEKTEEHIRTQFCQTERQITKE
FEKLHQFLRDEEAVRIAALREEYEQKTQMMMKKIENTTKAKSSLLDTIRAIEQVTGAGDI
SFLQNYKNTKRRTQCTLQDPEGIPGALIDVAKHLGSLKYKVWEKMLGIIQYTPVILDPNT
AASYLSLSEDLTSLRYTEERNQIPDNPERFDLRVCVLGSEGFTSGRHYWDVEVGDKTDWI
LGVAKESIDRKGLIIPSPGRGFWTICLWGGNYFAMTSPDTQLSPKRSPKKIRVQLDYDCG
IVSFFDLSDKTPIYTFQDTFAEKVFPFFFPGYPGPLHICPMKISIKVENGAVFCH
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaagatcatatctcctggaagaggagctctcctgtcctgtgtgctttgacata
ttcaaggatcctgttttactgacatgtagtcacagtttctgtaaagcatgtctagagctg
ttctgggaagagaggtgctctcaggattgtcctgtttgcaggagaaggtcttctaaattc
cggcctcctaccaacttggctttaaagaatattaccaaaaccttcttaaaggagaaatac
tcaagacatccagcaagggcagaagttctgtgctgtcttcaccaggaaaaattaaagctc
ttctgcatggatgatcaagagcttctttgtgctgtttgtcagacttctataaatcatgaa
aatcacacattacgcccactgcaggaagcagctcagatttataagaatcagctccagact
gcactggatcctttgaaggagaagctggaatcttttcgtaaaatgaaacaaacatatgag
aaaacagaagaacacattaggacccagttttgtcaaacagaaagacagataacgaaagaa
tttgagaaacttcatcaattcctaagagatgaagaagcagtaaggatagctgcactgagg
gaggaatatgagcaaaagactcaaatgatgatgaagaagattgagaacactacaaaagca
aaatcatcccttttagacacaatcagagccatagaacaggtgacaggagctggagatata
tcattcctacagaactacaagaacacaaagagaaggactcagtgcacacttcaagatcca
gaaggaattccaggagcgctgatagatgttgccaagcacttgggatctctgaagtacaaa
gtctgggagaagatgctgggaattattcaatatactcctgtgattctggaccccaacaca
gctgcctcctatctctcattatctgaagatctaaccagcttgagatacactgaagagaga
aaccagattccagacaacccagagagatttgatctccgggtatgtgtgcttggatctgag
gggttcacctcaggcagacattattgggatgttgaggtaggagacaaaactgactggatt
ctgggtgttgccaaagaatccattgacaggaaaggactcatcattcccagcccaggaaga
ggattttggactatatgtctgtggggtgggaactactttgctatgacatcaccagataca
caacttagtccaaagcgaagcccaaagaagataagagtgcagttggactatgattgtggt
attgtgtcattctttgatctcagtgacaaaacgcccatttacacttttcaagacacattt
gctgagaaggtgtttcccttcttctttcctggctaccctggtcctcttcatatctgccca
atgaaaatatctattaaagtggaaaacggtgcagttttttgccactaa
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