Lepisosteus oculatus (spotted gar): 102690346
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Entry
102690346 CDS
T07349
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03013
Nucleocytoplasmic transport
loc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102690346 (rnps1)
03015 mRNA surveillance pathway
102690346 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102690346 (rnps1)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102690346 (rnps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_occluded
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
102690346
NCBI-ProteinID:
XP_015215434
Ensembl:
ENSLOCG00000001758
UniProt:
W5M0W9
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All DBs
Position
LG13:complement(2117223..2125083)
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AA seq
282 aa
AA seq
DB search
MAPSPTKRKDRSEDKAKDRGKEKVGAKEAADKDRGREKARKRRSASTGSSSSRSRSSSSS
SSSSGSSSGSSSGSSSSSASSRSGSSSSSRSSSSSSSSGSPSPGRRRHDNRRRSRSKSKS
PKREERKRRSPSPRPTKVHLGRLTRNVTKDHIMEIFSTYGKIKMIDMPVDRLHPHLSKGY
AYVEFESADEAEKALRHMDGGQIDGQEITATAVLAPRLRPAPRRMTPPRRMPPPPPVWRR
TPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcacccacgaagaggaaggaccgctccgaggacaaggccaaagaccgaggc
aaggagaaggtgggagcgaaggaggcggcggacaaggaccgcggcagggagaaggcccgc
aagcgccgcagcgcctccacgggcagcagcagcagcaggtctcgctccagctccagctcc
agctccagctccgggtccagctcgggctcgtccagcggctccagctcgtcctcggcgtcc
agccgctccggctcctcctcctcgtcccgcagctcgagcagcagcagctcctccggctcg
cccagcccgggccgccgccgccacgacaaccgccggcgctcccgctccaagtctaagtcc
cctaaaagagaggagaggaagaggaggagtcccagtcccagacccaccaaggttcacctt
ggtcggctcaccaggaacgtcaccaaggatcacattatggagattttctccacctatggg
aagatcaagatgatagacatgcctgtggacaggctgcacccacacctctccaagggctac
gcctacgtggagtttgagagtgcagatgaagcagaaaaggccctcagacacatggatgga
ggtcagattgatggccaggagatcacggcgactgcggtgctggccccccgcctgcggcca
gctcctcgcaggatgaccccccctcgccggatgccgcccccgccccctgtgtggcgccgc
actccgccccgcatgaggaggaggtctcgctcgccgcgccgcagatcgccggtccgccgc
aggtcccggtccagatcgcccggccgccggcgtcaccggagccgatccagctccaactcc
tcgcggtag
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integrated database retrieval system
