Lepisosteus oculatus (spotted gar): 102691227 Help Entry 102691227         CDS       T07349                                  Symbol col22a1 Name (RefSeq) collagen alpha-1(XXII) chain   KO K16630   collagen type XXII alpha Organism loc  Lepisosteus oculatus (spotted gar) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen VWA VWA_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  102691227 NCBI-ProteinID:  XP_015212313 Ensembl:  ENSLOCG00000003807 LinkDB All DBs Position LG11:complement(8758132..8850667) Genome browser AA seq 1621 aa AA seqDB search METVLRMGFRICKILIFLALMLPGGRTIAQRAGCKNVQYDLVFILDTSSSVGRENFEKVR QWVANLVETFDIGPDKTRVAVVRYSDRPTTEFDLGRYRTLEEVKSAARNIRYLGGNTNTG DAISYTTTRIFQDARPNAQGIKKVAILMTDGRSQDYVLEPSKAAHQAGIRMFAVGIGEAL RVELEEIASEPKSAHVFHVSDFNAIDKIRGKLRRRLCENVLCPNVHIEGDRFKSISGKDM DEIPGFDLMEYFNVKDIFGMKDDISQSAYVRLGTMPIVQQTEDVFPQGLPDEYAFVTTFK FRKTSRREDWYLWQIFDKYGIPQVSIRLDGENKAVEYNAVGLTKDAVRAVFKNPEVNNLF DRNWHKIALSVQARSVSLYLDCKLIETLPIDDREDIDIRGKTVIGKRLYDSVPIDFDLQR MVIYCDSKHAELETCCDIPSGPCQVTVVTEAPVIDVTTQRSGEQHSGHQSVNCTCPAGEK GEVGPPGTEGSKGERGEPGSQGAIGPAGLKGEKGEPGRGILVKGEKGEKGEEGEQGETGL RGEKGDKGTHGPAGLAGKPGNKGERGDPGEPGEIGLPGPLGPKGSKGEIGSPGSPGARGI PGEKGGKGDKGSDGEKGERGIDGFPGKPGAPGKDGDKGSIGLPGVIGSKGQKGEMGPAGL PGDVIQKEGFKGEQGPPGPRGPPGPDGPPGPPGLPGTDGLPGEPGLQGQRGRKGESGLPG VDGLPGPPGPQGPPGNPGNMGHPGPPGLPGEIGFSGKPGEPGKPGLPGKDGLDGLPGNDG PKGSPGEPGLDGFPGKPGPKGDMGPPGPIGLQGNRGEAGPPGLPGLIGARGEKGSQGEPG REGAMGPRGEKGSQGDIGPEGPAGPPGKVETVEAEPGEPGEPGQKGEKGDQGQPGDPGPR GVAGEQGRTGPAGPPGPKGEPGLQGESGRIGDPGPPGLQGPPGVRGLPGSVGVPGNPGLP GNDGLRGEKGEQGKDGPQGPTGPPGEAGPAGIPGLPGKGKDGEPGEPGARGLPGLPGPKG ETGAPGLQGLPGDRGPPGIGRPGPLGPAGAQGEKGPPGLRGLPGVAGPQGSPGHNGLPGR QGDRGPPGEPGKAAELSEKDLSAFLKDMCKDCPPGPPGVPGMPGFKGDKGPAGPPGKDGR DGYQGPTGPPGPPGPRGMDGIKGGKGDRGPPGEAGEKGEKGLPGAPGYPGAAGLPGQSGA DGSPGPAGPPGAPGEKGKEGLKGIQGPPGLPGLMGLAGKNGKDGSPGEPGDPGKQGEPGP PGRDGMRGLPGFKGHRGEPGPLGPKGEEGKIGHLGPPGKPGKDGDPGRPGAEGPRGPRGE QGKSGPPGPQGKAGPIGNPGPQGHKGDSGSPGLPGFAGPRGPPGPPGEPGLQGKDGIPGK TGDRGSKGERGDSGIKGDKGPPGDNGLPGEPGPPGRKGHTGMMGMTGPQGERGPAGPQGA PGQPGFPGPRGESTSLEEMRRMIQEELAKQLDAKMAYLMAQIQPAHVKSSPGRPGPPGPP GKDGLPGRSGPPGEPGSPGQNGAEGPRGPIGPKGERGAKGERGETGIGQRGEIGPPGPAG APGAPGYAKDGLPGTPGPQGEPGNPGTHGPPGPPGPNGQCDPSQCAYYASLAARPANVKG P NT seq 4866 nt NT seq  +upstreamnt  +downstreamnt atggagacggtgttgcgaatgggatttcggatttgtaaaattctaatattccttgcactg atgcttccaggtggaagaacaattgcacaaagagcaggatgtaaaaacgttcagtatgac ttggtctttatactggatacctcatccagtgtgggaagagagaacttcgaaaaggtcagg cagtgggtggccaacttagtggagacatttgacattggaccagacaagacacgtgtggct gtggttcggtatagtgacaggcctaccacagagtttgaccttgggcgatacagaactctg gaagaagtcaaaagtgcagctcggaatatcaggtaccttggaggaaacaccaacactgga gatgccattagttacactaccactcgcatcttccaagatgcgaggcccaatgcacaaggt atcaagaaggttgccatcttgatgacagatggaaggagccaggattatgttttggaacct tccaaggctgcccatcaggccgggataaggatgtttgcagttggcattggcgaagctctc agagttgagctggaggagatcgcttcagaaccaaagtctgctcatgtgtttcacgtttct gatttcaacgccattgacaagataagagggaaactgaggagacggctctgtgagaatgtg ctctgtccaaatgttcacattgagggcgacaggtttaagtccatcagtggcaaagacatg gatgaaattccaggttttgatcttatggaatattttaatgtgaaagacatttttgggatg aaagatgatattagtcaaagtgcctacgtacgacttggaaccatgcctattgtccagcag actgaagatgtatttcctcaaggtcttccagatgaatatgcttttgtgaccacattcaag ttcagaaaaacctccagacgagaagattggtacctctggcaaatttttgacaagtatggg ataccacaggtgtccattagattagatggagagaacaaggcagttgaatacaatgccgtt ggactaacaaaggatgcagtgagagccgtctttaagaaccctgaagttaataacttgttt gaccgcaactggcacaagatagccctaagtgttcaagccagatcagtgtccctctatctg gattgcaaactcatagaaactctgcccatcgatgacagggaagacattgacatccgaggg aaaactgtcattggcaagaggctctatgacagtgtgcccattgattttgacctacagaga atggtgatctattgtgactcgaagcacgcagagttggagacctgttgtgacatcccatct ggtccttgccaagtcactgttgtgacagaggcccctgtcattgatgtcacaacacagaga agcggagagcagcacagtggtcaccaatcagtgaactgtacctgtccggctggtgaaaaa ggagaggttggcccacctggaacagaaggttcaaaaggagaaaggggggaacctggtagt cagggtgcaattggaccagctggccttaaaggagaaaaaggagagcctggcagagggatt cttgtcaaaggtgaaaaaggtgaaaagggcgaggaaggtgagcaaggggaaactggatta agaggagaaaagggggacaagggtacacatggacctgcaggtcttgctgggaaaccaggg aataaaggagaaaggggagatccaggagagcctggtgagattggtttacctggacctctg ggaccaaagggatcaaaaggtgaaattggctctccagggtctcctggagccagaggaata cctggagagaaaggcggtaaaggagataagggaagtgatggtgagaagggagaacgtggc attgatggatttcctggcaaacctggtgcccctggtaaagatggagacaaaggaagcatt ggattgcctggtgttattggatccaaaggccagaagggtgaaatggggccggctggttta ccaggcgatgtgattcaaaaggaaggctttaagggagaacaaggaccaccaggaccccgc ggccccccaggacctgatggacctccaggaccccctggtttacctggtactgatggacta cctggagagcctggcttacaaggtcaaagaggaaggaaaggagaaagtgggctgcctgga gttgatgggttgccaggaccaccaggtccccagggtcctcctggaaatcctggaaatatg ggacatcctggacctccaggcttaccaggtgaaattggattttctggcaaaccaggagag ccaggaaaacctggcttacctggtaaagatgggctggatggccttccaggaaatgatggg ccaaagggttcaccaggagaaccaggtctagatgggttccctggaaaacctggtcctaag ggagatatgggaccaccaggaccaatcggtctacagggaaacagaggagaggcagggcct ccaggtttgcctggattaattggcgcaagaggtgaaaaaggaagtcaaggtgaaccagga agagaaggagccatgggaccaagaggggaaaaaggcagtcagggcgatattggtccagaa gggcctgctggacccccaggaaaagttgaaacggtggaagcagagcctggagaacctggt gagcctggacaaaaaggagagaagggggatcaaggacagccaggtgatcctgggccaagg ggtgtagcaggagagcaaggtcgtacaggaccagccgggcctcctggtccgaaaggggag cctggactccagggcgagtctggtagaattggtgatccgggtccaccaggattacaaggc cctccaggtgtccgtggtttacctgggagtgtgggagtaccaggtaatcctggcctacct ggaaatgatggtctcagaggagaaaagggagaacaaggaaaagatggaccgcagggacca acagggcctccaggggaagctgggcctgctgggattcctgggctgcccggaaaggggaaa gatggagaacctggagagccaggagcacgtggtttgccaggacttcctggccctaagggt gaaactggtgcccctgggttacagggtcttccaggagacagaggcccacctggtattggg cgtcctggacctctgggaccagctggagcccagggtgaaaaaggaccaccgggcctaaga ggattacctggtgttgctggtccacagggttcaccagggcataatggtttgccagggaga caaggtgacaggggtcccccaggagagccaggaaaagccgcagaactttctgaaaaagat ctttcagctttccttaaggatatgtgtaaagattgtccaccgggacctcctggggtgcca ggtatgccaggttttaaaggagacaaagggccagcaggccctccaggaaaagatggtcga gacgggtaccagggacccactgggcctccaggtcccccagggccacgtgggatggatggc atcaagggtggaaaaggggatcgcggacctcctggtgaagctggagagaaaggtgaaaag ggattaccaggggctcctggatatcctggggcagcgggattaccagggcaatctggagca gatggtagcccaggacctgcaggtccaccaggagctcctggggaaaagggtaaagagggt cttaaaggaatccaggggccaccaggactaccaggtttaatgggattggcaggaaagaat ggaaaagatggcagtccaggagagccaggagatccgggtaaacagggggaaccaggtcct ccaggcagagatggaatgcgaggacttcctggttttaaaggacacagaggagaacctggt cctcttggtcccaaaggtgaagaaggaaaaattggacaccttggacccccaggaaaacct ggaaaagatggtgaccctggtcgcccaggtgcagagggacccagaggacctagaggagaa cagggtaaaagtggcccacctggaccacaaggaaaagcaggacccataggaaatccggga ccccagggtcataaaggagatagtggaagccctggactgcctggctttgcaggcccgcga gggcctccgggaccaccaggtgaaccaggccttcaaggaaaggatggcattccaggcaag acgggagaccgtgggtctaaaggagaaaggggggactctgggatcaagggagataaaggg cccccaggggacaatggcctcccgggagaacccggacctccaggaaggaaaggacacaca ggcatgatgggcatgacaggacctcagggggaaagagggccagcagggccccagggggca ccaggacagccaggcttccccgggccccggggagagtcaacgtcactggaagaaatgcga agaatgatccaagaggaattagctaaacagttagatgccaaaatggcatacctcatggct cagatacagccagcccatgtgaagtccagtcctggccgcccaggaccacctgggcctcca ggcaaagacgggcttcctgggcgatctggtccacctggagagcctggcagcccgggacag aatggagcagaaggaccgcggggaccaatcggtcctaaaggcgaaagaggagcaaaaggt gaaagaggtgaaactggcatcgggcagagaggagagattggtcctcctggtccagcaggt gcaccaggagccccaggttatgcaaaagatggattgcctgggacaccagggccccaggga gaaccagggaaccctgggacacatggtcccccaggcccaccaggacccaatggacagtgt gacccctctcagtgcgcttactatgcaagtctggctgccaggcctgccaatgtcaaaggc ccttaa

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