Lepisosteus oculatus (spotted gar): 102699159
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Entry
102699159 CDS
T07349
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loc03041
]
102699159 (cwc22)
Spliceosome [BR:
loc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
102699159 (cwc22)
Complex C
U4/U6.U5 tri-SnRNP related factors
102699159 (cwc22)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Cnd1
Motif
Other DBs
NCBI-GeneID:
102699159
NCBI-ProteinID:
XP_015214532
Ensembl:
ENSLOCG00000006456
UniProt:
W5MHE1
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All DBs
Position
LG12:complement(13922792..13971170)
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AA seq
1041 aa
AA seq
DB search
MAAESNEVEIETRRDLTATEEASNSLTMDQSPRSRSSSEEKEESTSKGRKSEDMEGERSS
AGVRKRSPDAGGGRGSSANSDDDTENGSSSGSDSDSSKDSRSRSSGAPSKMRSRVAQIKH
RSNEEEKDRHSSPSPSYRDGEGRRSRSPPVRDRSSSEDRDRRYERGRPAVGRYSDRERHS
SRERDRERERHSDRERDRDNVREWYSGRERDRDYYSSRDRGRERRSSRERDRMRHSSWER
EVDSRRRGRSPSPLQREPPPAEEPPVKKKKEELDPILTRTGGAYIPPAKLRMMQEQITDK
SSLAYQRMSWEALKKSINGLINKVNVSNIANIINELLQENIVRGRGLLARSTLQAQSASP
IFTHVYAAVVAIINSKFPQIGELILKRLILNFRKGYRRNDKQQCLTASKFVAHLINQNIA
HEVLCLEMLTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGINAIFERLRNILHESEID
KRVQYMIEVMFAIRKDGFKDHPIIPEGLDLVEEEDQFTHMLPLEDDYNPEDILNVFKMDP
SFLENEEKYRTIKKEILDEGSSDSGSGDDADGSDEDEEDDDNEEEEQEKITIHDKTEVNL
VAFRRTIYLAIQSSLDFEECAHKLIKMDFPDSQTKELCNMILDCCAQQRTYEKFFGLLAG
RFCLLKKDYMESFEAIFKEQYETIHRLETNKLRNVARMFAHLLYTDSVPWSVLECIKMSE
ETTTSSSRIFVKILFQELCAYMGLPKLNERLKDVTLQQFFDGLFPRDNPRNTRFAINFFT
SIGLGGLTDELREHLKNAPKMIMTQKQEVESSDTSSSSSSSSSSSSSGSDSSSSDSESST
DSSSESEPSSSSGSSSSDSDSRRKKVQSKKKDKGSAKSTTKKYSSKKQDPIRRDSSSEER
ERPTEKNSSKTSRHRDRREEPKSPDWSHKDQHRRQNRDCEDKEFDSRKERENMKNNSQSD
YDRDRYRSREEEPQSRWRERSKSKERSRKETNSRTDSRDFYKNGVEKQTEKSDKQSRHSD
RYRDARKPEDRHKESSPRRKR
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggaatcgaatgaagttgaaattgaaacaagacgcgacttgactgcaacagag
gaggcttccaattctcttaccatggatcagtctccaagaagccggagctcctctgaggaa
aaagaagagagcacaagcaaaggaagaaaaagtgaggatatggagggagagagaagctca
gcgggtgtcagaaagagaagtcctgatgctggaggtgggaggggatcctctgcaaacagt
gacgatgacactgaaaatggcagctcaagtggctcagacagcgacagcagtaaagacagc
aggagtcgctcaagtggagcacccagtaaaatgagaagtagagtggcacaaatcaaacat
cgctcaaatgaggaagaaaaagaccgacacagcagtccttctccaagttacagggatgga
gaaggcagaaggtcgcgttcacctccagtgcgggatcgaagttcctcagaagatcgcgat
cggcgatatgagcgggggcgtcctgccgtgggaagatacagtgacagagagcggcactcc
agcagagaaagagaccgagagagagagcgacattctgacagggagagggaccgagacaac
gtgagagagtggtattcgggtagggagagggacagagactactattcaagcagggacagg
ggccgtgagcgccggtccagcagagaaagggatcgtatgcgtcactccagctgggaaagg
gaggtggattccaggaggagaggcagatctccatcccctctccagagagaacctccccct
gctgaagagcctccagtgaagaagaagaaagaagagctggaccccatcctgactcgcaca
ggtggagcctatatcccccctgccaaactgcgcatgatgcaggaacagattacagacaag
agcagtctggcttatcagagaatgagctgggaagccttgaagaaatccatcaatggtctc
atcaacaaagtgaacgtctccaacattgccaatattatcaacgaacttctacaagaaaac
attgtgagaggaaggggtcttttggccaggtcaacgttacaagcacagagtgcctcccct
attttcactcatgtatatgctgcagttgtggcaattattaattcaaagtttcctcaaatt
ggagagctcattcttaagagattaattcttaacttccggaaggggtaccgaagaaacgat
aagcaacaatgtctgacagcatcaaagtttgttgcccacctgatcaatcagaatattgct
catgaggttttgtgtttggaaatgctcactctgctattggaaaggcccactgatgacagt
gtggaagtggccatcagctttctgaaggaatgtggtctcaaattgactgaggtctcacca
cgtggcattaatgctatatttgaacggttgcgaaacatcctgcatgagtcagaaattgac
aaacgtgtccagtacatgattgaggttatgtttgcaattcgtaaagatggctttaaggat
catccaatcattcctgaaggtcttgatctagtagaggaggaggatcagtttactcatatg
cttccattggaagatgattacaatccagaggatattctcaatgtattcaagatggaccct
agctttctggaaaatgaagagaagtacagaacaattaaaaaggagattcttgatgagggc
agcagtgattcaggttctggagatgatgcagatggcagtgatgaagatgaagaagatgac
gacaatgaagaagaagaacaagagaaaatcaccattcacgataagacagaggtgaatctg
gttgcattccgccgtaccatctatcttgctatccagtcaagcttggatttcgaagaatgt
gctcacaaactgataaaaatggattttcctgatagccaaacgaaagagttatgcaatatg
attttggactgctgtgcgcagcaaagaacatatgaaaagttttttggtcttcttgctggg
cgattctgtttgctaaagaaagactatatggagagctttgaagccatatttaaagaacag
tatgaaaccattcaccgactggaaaccaataaattaagaaatgttgccagaatgtttgca
catctgctgtatacagattctgtcccatggagtgtcctggagtgtataaagatgagtgaa
gaaacgactacgtcatcaagtcgaatctttgtcaaaattttattccaagagctctgtgca
tacatgggacttcctaaactcaacgaacggcttaaagatgtcactttgcagcagttcttt
gatgggctgtttccccgcgacaatcccaggaacacaagatttgccattaatttcttcacc
tccattggcttgggaggtctaacagatgaacttcgagagcatttgaaaaacgctccaaaa
atgataatgacacagaaacaagaggtggagtcatcagatacttcgtcgtcgtcctcctcc
tcgtcttcatcctcttcttcaggctcggacagtagtagcagtgacagtgagagcagcacg
gactcctccagtgaatcagagccctcgtccagcagtggaagcagtagctcagattcagat
tcaaggcgcaaaaaagtgcaaagcaagaagaaagacaaaggatctgcaaagtcaaccaca
aagaaatattccagtaagaagcaagaccccatacgcagagacagcagcagtgaggaacga
gaaagaccaactgaaaaaaacagcagcaaaacctccagacacagagacagaagagaagag
ccaaaaagtcctgactggagtcacaaggaccagcaccgcaggcaaaacagagactgtgag
gacaaagagtttgactctcgaaaagaacgagaaaacatgaaaaataactcccagtctgat
tatgacagagacagatacagaagcagggaagaggagccgcaaagtcgctggagagaaagg
tcaaagtcaaaagaaaggagtcgcaaagagacaaactccagaacagacagtagggacttc
tataaaaatggagttgaaaagcaaacagagaaatctgacaaacagagcagacactccgat
agatacagggatgctaggaaacctgaagacaggcataaggagagctctcccaggagaaaa
agataa
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