Lysinibacillus pakistanensis: GDS87_16295
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Entry
GDS87_16295 CDS
T06280
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak02020
Two-component system
lpak02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GDS87_16295
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GDS87_16295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lpak02035
]
GDS87_16295
Bacterial motility proteins [BR:
lpak02035
]
Flagellar system
Chemotaxis proteins
MCPs
GDS87_16295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
ATG16
RelB
DUF4455
CALCOCO1
DUF1664
PilJ
Motif
Other DBs
NCBI-ProteinID:
QGG52398
LinkDB
All DBs
Position
3385301..3386998
Genome browser
AA seq
565 aa
AA seq
DB search
MNIINKLKGSLLYKYIASFTIPIAIISIIFSVVLFITSYRIIDNFVITQFESSLEIVSNS
IFEDLEKNDVIAADNGNHQKYEQLLKQLNGTVNKNDIENAYILSRSNGKEHIVALSNKDN
YKEDYVFDEKMNVALDAGSLQISDIYQDEYGIHKSIFIPFKNTDILFGLDMDASFISKLQ
TETLWICIIMTVIFILLGIIVAYFISIGITKPIKKITGYVGRVAKGDLAVEPLQIKGSNE
IAQLSLGIENMTEDLRLLIQQIAENAEQVAAMSEELTASSEQTSASIQQITSSMQEVAAG
SEKQTTSIEEVENHISVISTKMAEVVSSVNDVTAKAISASTISEKGNTTIQNATEKMTVT
TTAIQETSAVVERLSTYTNEIGDIVTLINQITDQTNLLALNASIEAARAGEHGKGFAVVA
EEVRKLADQSLAATNSIRTRIETIKEESAQAVKSMGISSSNLVESSTTFNASGEAFGEIN
TQIMELTKEMNHVNTIITNMNQGVNSIAISVEEVGIVAVQASGNIQNVAAASEEQSASIE
EITASSNNLAEMAQQLRHIIQKFQL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
ttgaatataataaataaattaaagggttctttactttataaatatattgcaagcttcacc
attcccattgctattatttcaatcatatttagtgtggtactttttataacgtcttatcga
attatcgataattttgtcattacacaatttgagtcatcattagaaattgtttctaattct
attttcgaagatttagaaaaaaatgatgtcattgctgcagacaatgggaatcaccaaaaa
tatgaacaactactaaagcaattaaatggcacagtgaataaaaacgatattgaaaatgca
tatatcctttcccgctctaacggaaaggagcatatcgtcgctttaagcaacaaagataat
tacaaagaagattatgttttcgatgaaaaaatgaatgttgctttagacgctggttctttg
caaataagcgatatttatcaagatgaatatggtattcataaatccatttttataccattt
aaaaacacggacattttattcggtttagatatggatgcttcctttatctctaagctacaa
acagagacactttggatatgtatcattatgacggtgattttcatcctattagggattatt
gtcgcttatttcataagcattggtattacaaaaccaataaaaaaaataactggttatgtt
ggcagggtagccaagggagatttagctgttgaacctctacaaatcaaaggttccaatgaa
atcgcacagctttctctgggcatcgaaaatatgacagaagatttacgcttactaattcag
caaatcgcagaaaatgctgaacaagtcgctgctatgtcagaggaattaacagcaagttct
gagcaaacaagcgcatccatacagcaaattacatcttccatgcaggaagttgcagctggt
tcagaaaagcaaacaacctccattgaagaggtagaaaatcatatctcagtaatctctaca
aaaatggctgaggtcgtttcgagcgtgaatgatgtgacagcaaaggcaattagtgcatcc
acaatttctgaaaaaggtaatacgacaattcaaaatgcaactgagaaaatgactgtcact
actactgccattcaagagacttcagcagttgtggaacgtttaagcacatacacaaatgaa
attggtgacattgtgaccttaattaaccaaataacggaccaaaccaatttactcgcgtta
aatgcatctattgaagcagcaagagctggcgaacatggtaagggctttgccgttgttgca
gaggaagtacgtaagcttgctgatcaatcattagcagcaactaacagtattcgaacacgg
attgaaaccattaaagaggaatctgcacaggctgtaaaatctatgggaattagcagcagt
aatcttgtggaaagctcaacaaccttcaatgcatctggtgaggcctttggagaaattaat
acacaaattatggagctaacaaaggaaatgaatcatgtcaatacgatcattaccaacatg
aaccaaggtgtgaacagtattgctatttctgtagaagaagttggtatagtagccgttcaa
gcatcaggaaatattcaaaatgtagcagcagcgtctgaggaacaatcagcaagcatcgaa
gaaattactgcatcttccaataatttagcggagatggcacaacagcttcgtcatatcata
caaaaatttcagctataa
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