Leishmania panamensis: LPMP_204070
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Entry
LPMP_204070 CDS
T06539
Name
(RefSeq) coatomer alpha subunit, putative
KO
K05236
coatomer subunit alpha
Organism
lpan
Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpan04131
]
LPMP_204070
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpan04147
]
LPMP_204070
Membrane trafficking [BR:
lpan04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
LPMP_204070
Exosome [BR:
lpan04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LPMP_204070
Exosomal proteins of bladder cancer cells
LPMP_204070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Coatomer_WDAD
COPI_C
WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
22574618
NCBI-ProteinID:
XP_010698608
UniProt:
A0A088S8G8
LinkDB
All DBs
Position
20:1677648..1681238
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AA seq
1196 aa
AA seq
DB search
MLTKFEARSSRVKAVALHNSATWVLCGLHNGAVQIWDYRMSICVDTYTEHVGAVRGADFH
VNQPLFVTGGDDYTVKVWNYKLHRCLFTMTGHMDYVRTTFFHHEQPWILSCSDDFTIRVW
NWQSRKSIACLPGHNHYVMCAQFHPFSDLVVSGSLDKTIRVWDISALRHRKEEMGITQDL
LGTTDVVVRYELEGHEKGINWVAFHPCGDLLLSAADDRTVRLWTMSGTSCYVSRTFTGHT
SNVCCAVFYRNDYLVSCAEDRTIRVVHMSSGATVQTFRREVERYWIMASDSVHNLIAIGH
DTGLQVFKLTRERPAFAIHNATELYYACQNKLNMYNFETEEVTSCTVNYQFYPPTALSCC
PTTGGVMLSYAKGGPQVEWIPKPLATRTCNVEGTMKGIDGVFFGGYKLAYVDVNGKMCIQ
NVSKPGGKPQQTDVLCSRIFAAPVGCVLCQSDDKILLYQVAQHGAVMEATVPAVRYAVWD
KDFSKVALIAKNTVTIMTKRLKLIASVAESSARIKSAAFDETRDVMYFTTSNHLKYCYLR
NGETSTISTLKNVVYLARAVGDTIYVLTRDGRVLRKELDNVELNFKLKLQQQSYRDLLRI
IQQGKLKGQALVGYLRKHGHSEVALHFVSDPLTRFNLAIECGAIDIAKAMATELNQPVTW
RHLADTATRFGDIQLAQFASAKAGNYYASGLLALLTGNTASVANLVNATHDDHFKLHYGM
YVNDAKGRVDLLCKANQLPLAYVTAKSHGLENTAAQLLQQLQPDVAARVEAQRFYPVPQQ
QPVDPVTENWPMLQVEESVFTRLLKEPGHLDAIAQPELDEDVAAGAGWDDDEDDGALLAG
AGADDGDAGAPTYNGDKRGGWDDDLDIDVSAALPDAGGACAASSGYVVPREYPPITQTWT
DAYTLPAFHVAAGSFASALCLLQRQIGLADPTPLKPYMMQLWAAVNSCRPAPNGLSTVFA
LSTQPPNSETEAPHAPALPDFMPVLAEKLRIGYQLFVEGNFAEALDVFRSILHLSVMTVV
KDDQQKATLREIMAVAPEYTRALTLQLQLRTLSASSVEALQLALYFTHFRLHRAHLTLAL
SQAMSKAYKQKNIKTAAEVARRLLEQDPPKNKAQQAAAIIAEADRNPTNAVPIDYDERNP
FIMCSASYKPMYKGVVSPVRCSYCLSPADPSYRGTLCPVCKLSKIGVDCAGLVNRV
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaagtttgaggcccgctcatcccgcgtgaaagcggttgcgctacacaacagc
gccacatgggttctctgcggattgcacaacggtgcggtgcagatttgggactatcgtatg
agcatctgtgtcgacacctacacagagcatgtgggtgcagttcgtggcgctgacttccac
gtgaaccagccgctcttcgtgacgggcggcgatgactacacagtaaaggtgtggaactac
aagctgcaccgctgcctctttacgatgacagggcacatggactatgttcgcaccaccttc
ttccaccacgaacagccgtggatcctgtcgtgctcggacgacttcaccatccgcgtttgg
aactggcagagtcgaaagagcattgcgtgcttgcccggtcacaaccactacgtcatgtgc
gcgcagtttcaccccttcagcgaccttgtcgtgtcgggcagcctggacaagacaatccga
gtgtgggatatctcagcgctgcggcaccggaaggaggaaatgggcatcacgcaggatctc
ttgggcacgacggatgtagtggtgcggtacgagttggaggggcatgagaagggcatcaac
tgggtcgccttccacccgtgcggcgacctgctactctctgccgccgatgaccgaacagtg
cgcctgtggacaatgtcggggacatcgtgctacgtctctcgcacgttcacgggacacacg
agcaacgtctgctgcgccgtcttctacaggaacgactatctggtgtcctgcgcagaggac
cgcacaattcgcgtggtacacatgtcctccggcgcgacagtgcagacgttccgtcgcgaa
gtggagcgctactggatcatggctagcgactcggtgcacaacctgatcgccattggccac
gacacgggcctacaggtcttcaagctgactcgggagcggccggcttttgcgattcacaac
gcgacggagctctactacgcgtgccagaacaaactgaacatgtacaacttcgagaccgag
gaagtcacctcctgcaccgtcaactaccagttttacccgccgacggcgctctcgtgctgc
ccgacgaccgggggtgtgatgctttcctacgctaaaggtggtccacaagtggagtggatt
ccgaagccattggccacaaggacatgtaacgtggagggtaccatgaagggcatcgacggt
gttttcttcggtggttacaagctcgcctacgtggacgtaaacggcaaaatgtgcatccag
aatgtgagcaaacctggtggaaagccgcaacagacagacgtgttgtgcagtcgcattttc
gctgccccggtcggctgcgttctttgccagagcgacgacaagatcctcctgtaccaggtg
gcgcagcacggtgcagtaatggaggcgacggtgccggcggtgcggtatgctgtgtgggac
aaggatttctccaaggtagcactcatcgccaagaacaccgtaaccattatgacgaagcgc
ctcaagctcattgcgtcggtcgccgagtcgtcagcccgcatcaaatccgctgccttcgat
gagacgcgcgacgttatgtacttcaccacatccaaccacctcaaatactgctacctgcgc
aacggcgagacaagcacgatcagcacgctcaaaaatgtcgtttaccttgcgcgggccgtg
ggcgataccatctacgtcttgacgcgtgacggtcgcgttctgcgcaaggagctggacaac
gtggagctcaacttcaagctcaagctgcagcaacagtcgtaccgcgacctcctccgtatt
atccagcaaggcaagctcaagggccaggccctggtcgggtatctgcgcaagcacggacac
tccgaggtcgctttgcacttcgtcagcgacccactcacgcgcttcaacctcgccatcgaa
tgtggcgccattgacattgccaaggcgatggctactgagctcaaccaaccagtcacctgg
cgacacctcgccgacactgccacacgctttggtgacattcaactggcccagtttgcgagt
gccaaggcgggcaactactacgcctctggtctgcttgcgcttctcacgggcaacaccgcc
tcagtggccaaccttgtcaacgccacacacgacgaccacttcaagctgcactacggcatg
tatgtcaacgacgcgaaggggcgtgtggacctcctctgcaaggcaaaccaactacctctg
gcgtacgtgacagcgaagtcgcatggactggagaacacggcagcgcagttgctccaacag
ttacagcctgatgtggcggcgcgtgtggaggcacagcgattctaccctgtgccccagcag
cagccagttgatccagtgacggagaactggccaatgctgcaggtggaggagtcggtgttt
acgcggctcttgaaggaaccggggcacttggacgccatcgcacagccggagctcgatgag
gacgtcgccgccggcgctgggtgggacgacgacgaggatgacggcgcgcttttggctggc
gcgggtgcagacgatggcgatgcgggggcgccaacctataacggtgacaagaggggtggc
tgggatgacgacctagacattgacgtgtcagctgcactgccggatgctgggggcgcctgt
gccgctagcagtggctacgtcgtgccgcgcgagtacccacccattacgcagacatggaca
gatgcctacacacttcctgctttccacgtcgccgctgggtcatttgctagtgcactgtgc
ctgctgcagcgccagatcggcttagcagacccgacgccgctgaagccgtacatgatgcag
ctgtgggcagccgtgaacagctgcaggcctgcaccgaacggcctctctactgtcttcgcc
ctgtccacgcagccaccgaacagcgaaacggaggcgccccacgccccagcactgccagac
ttcatgcctgtgctagccgagaaactgcgcataggctaccagctgttcgtcgagggcaat
tttgccgaagcgctggatgtcttccgcagcattctgcacctgtctgtcatgacggttgtg
aaggacgaccagcagaaggcaacactgcgcgaaatcatggcggttgctccagaatacaca
cgtgccctcacgctgcagctgcaactgcgtaccctcagcgcctcctcggtcgaggcgctg
cagctggcgctgtacttcacacacttccgccttcaccgcgcacacctcactctagccctg
tcacaggccatgagtaaggcatacaagcagaagaacatcaagactgccgctgaagtagcg
cgccgactgctggagcaggacccaccaaagaacaaggcacagcaggccgccgccatcatc
gccgaagcggaccgcaaccccactaacgccgtcccaatcgactacgacgagcgcaaccct
ttcatcatgtgttctgccagctacaaaccaatgtacaagggtgtcgtgagcccagtgcgg
tgcagctactgcttgtcaccagctgacccgtcctacagagggacgctctgccccgtgtgc
aagctgtcgaagatcggagttgactgcgctggcctcgtcaatcgagtttga
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integrated database retrieval system
