Lentilactobacillus parabuchneri: FAM21731_02250
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Entry
FAM21731_02250 CDS
T04617
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lpar
Lentilactobacillus parabuchneri
Pathway
lpar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAM21731_02250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpar03400
]
FAM21731_02250
Enzymes [BR:
lpar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FAM21731_02250
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FAM21731_02250
DNA repair and recombination proteins [BR:
lpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FAM21731_02250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
zf-TFIIB
NFACT_N
Zn_Tnp_IS1595
TF_Zn_Ribbon
OrfB_Zn_ribbon
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
APR08385
UniProt:
A0A1X1FC20
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All DBs
Position
2284986..2285828
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AA seq
280 aa
AA seq
DB search
MPELPEVETVRRGLTKLVEGSTIKSVDVLYPKMVNLPPKDFENALKGKKIDRIDRRGKYL
LIRLSDHLTIVSHLRMEGKYDVELDGAPLDKHTHVVFHLTDGRELRYNDTRKFGRMNLVD
TGTEMSVAGLKTIGPEPTEQALTLDYMTAIFKKSRKVIKPFLLDQSNIAGLGNIYADEVL
WLSKINPKQPVNSLKPAQIKRLRKNIITEIQMAIDGHGTTVHSYSTAYGEAGNFQNHLNV
YGKQGEPCPRCGTKIVKIKLAQRGTHYCPKCQPLRGEKHE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaaactgtcagacgcggtctcacgaaattagttgaagga
agcacgattaaatccgttgatgttttgtatccaaagatggttaatttgcctccgaaggac
ttcgagaacgcgttgaaggggaaaaagattgatcgaattgatcgccgggggaagtattta
ctcattcgtttgagtgatcacctcacgattgtttctcatttgcggatggaaggaaaatat
gacgttgaactagacggcgcaccgttggacaaacacacccacgtggtgtttcatctaacc
gatgggcgtgaattacgttacaacgatacccgcaagtttggtcggatgaatctcgtggat
accggcacagagatgtcggtggccggcttgaaaaccattggccctgaaccaactgaacag
gcgctgacgctcgactatatgacggcgatctttaagaaaagccgcaaagtcatcaaacct
tttttgctggatcaaagcaacattgccgggctaggtaacatctatgccgacgaggttttg
tggttaagtaaaattaatcctaagcagccggtcaattctttaaaaccagcgcaaatcaaa
cggttgcggaaaaatattattactgaaattcaaatggcaatcgatggccatggaacgacg
gttcattcgtattccactgcctacggggaagcagggaactttcagaatcatttaaatgtt
tatggcaagcagggagaaccctgtccgcgctgtggcactaaaattgtcaagattaagttg
gctcaacggggaacccattattgcccgaagtgccaaccgttacgtggtgaaaaacatgag
taa
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