KEGG   Lolium perenne (perennial ryegrass): 127334699
Entry
127334699         CDS       T08650                                 
Name
(RefSeq) histone deacetylase 9
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03082  ATP-dependent chromatin remodeling
lper03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127334699
   03083 Polycomb repressive complex
    127334699
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lper03036]
    127334699
Enzymes [BR:lper01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     127334699
Chromosome and associated proteins [BR:lper03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     127334699
   HDAC complexes
    Sin3A-HDAC complex
     127334699
    BRAF-HDAC complex
     127334699
    REST complex
     127334699
    SHIP complex
     127334699
    MiDAC complex
     127334699
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     127334699
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    127334699
  Chromatin remodeling factors
   NuRD complex
    127334699
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 127334699
NCBI-ProteinID: XP_051217190
LinkDB
Position
2:225561511..225566932
AA seq 430 aa
MLEKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPTEL
AQFHSADYVEFLHRITPDTQHLYASELTRFNLGEDCPVFDDLFEFCQIYAGGTLDAARRL
NHKLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDIKDIGDREGKYYAINIPLKDGIDDNSFTRLFKT
IIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFKIPLLVTGGGGY
TKENVARCWAVETGVLLDTELPNDIPDNEYIKYFGPDYTLKVPNLSMDNLNSKSYLSSIK
VQVMESLRAIQHAPGVQMQEVPPDFYVPDFDEDELDPDERVDQHTQDKQIHRDDEYYEGD
NDNDHDDGAH
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgctggagaaggacaggatatcctacttctacgatggggatgttggcaatgtgtacttc
gggccaaaccacccaatgaaaccgcatcgtctttgtatgacacatcatcttgtgctttct
tatgatcttcacaagaagatggagatatatagaccccacaaagcatatccaacagagctt
gcccagttccattctgctgattatgtggaattcttgcaccggataacgcctgatactcag
cacttgtatgcaagtgaattgactagattcaatcttggagaggactgcccggtctttgat
gatttgtttgagttctgccaaatctatgctggaggaactctagatgcggctcgaagatta
aaccataaattatgtgatattgccattaattgggctggtgggctgcatcatgcaaagaag
tgtgaggcatcaggcttctgctacattaatgatctggttttggggattctggagcttctc
aagtatcatgctagggttctctatattgacattgatgttcatcatggagatggagttgaa
gaagccttctatttcaccgacagggtaatgactgtaagtttccacaagtatggtgatctg
ttctttcctggcactggtgatattaaggatataggagacagggaaggaaaatattacgcc
atcaacatcccactgaaagatggcatagatgacaacagctttactcggctcttcaaaacg
attattgccaaggttgttgagacttatctgccaggtgctattgttcttcaatgtggggct
gattcattggcacgagaccgtctagggtgtttcaatctttcaattgaaggccatgctgaa
tgtgtgaagtttgtcaagaaatttaaaattcccctgctggtgacgggaggtggtggatac
accaaagagaatgtagcacgctgttgggctgttgaaactggagtccttctagacacagag
ctcccaaatgacatccctgacaatgaatatattaaatacttcggtccagactatacattg
aaagtaccaaatctgagcatggacaacttgaatagtaagagctatctcagttcaatcaaa
gtgcaagtgatggagagtttgcgggccatacagcatgcacctggagtccagatgcaagag
gttccacctgatttctatgtcccagactttgatgaagatgagctggatcctgacgaacgc
gtcgaccagcatacccaagacaagcagattcaccgggacgacgagtactatgaaggcgac
aacgacaatgatcatgacgatggtgcacattga

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