Lolium perenne (perennial ryegrass): 127334699
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Entry
127334699 CDS
T08650
Name
(RefSeq) histone deacetylase 9
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03082
ATP-dependent chromatin remodeling
lper03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127334699
03083 Polycomb repressive complex
127334699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lper03036
]
127334699
Enzymes [BR:
lper01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127334699
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
127334699
HDAC complexes
Sin3A-HDAC complex
127334699
BRAF-HDAC complex
127334699
REST complex
127334699
SHIP complex
127334699
MiDAC complex
127334699
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
127334699
Heterochromatin formation proteins
Other heterochromatin formation proteins
127334699
Chromatin remodeling factors
NuRD complex
127334699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
127334699
NCBI-ProteinID:
XP_051217190
LinkDB
All DBs
Position
2:225561511..225566932
Genome browser
AA seq
430 aa
AA seq
DB search
MLEKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPTEL
AQFHSADYVEFLHRITPDTQHLYASELTRFNLGEDCPVFDDLFEFCQIYAGGTLDAARRL
NHKLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDIKDIGDREGKYYAINIPLKDGIDDNSFTRLFKT
IIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFKIPLLVTGGGGY
TKENVARCWAVETGVLLDTELPNDIPDNEYIKYFGPDYTLKVPNLSMDNLNSKSYLSSIK
VQVMESLRAIQHAPGVQMQEVPPDFYVPDFDEDELDPDERVDQHTQDKQIHRDDEYYEGD
NDNDHDDGAH
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctggagaaggacaggatatcctacttctacgatggggatgttggcaatgtgtacttc
gggccaaaccacccaatgaaaccgcatcgtctttgtatgacacatcatcttgtgctttct
tatgatcttcacaagaagatggagatatatagaccccacaaagcatatccaacagagctt
gcccagttccattctgctgattatgtggaattcttgcaccggataacgcctgatactcag
cacttgtatgcaagtgaattgactagattcaatcttggagaggactgcccggtctttgat
gatttgtttgagttctgccaaatctatgctggaggaactctagatgcggctcgaagatta
aaccataaattatgtgatattgccattaattgggctggtgggctgcatcatgcaaagaag
tgtgaggcatcaggcttctgctacattaatgatctggttttggggattctggagcttctc
aagtatcatgctagggttctctatattgacattgatgttcatcatggagatggagttgaa
gaagccttctatttcaccgacagggtaatgactgtaagtttccacaagtatggtgatctg
ttctttcctggcactggtgatattaaggatataggagacagggaaggaaaatattacgcc
atcaacatcccactgaaagatggcatagatgacaacagctttactcggctcttcaaaacg
attattgccaaggttgttgagacttatctgccaggtgctattgttcttcaatgtggggct
gattcattggcacgagaccgtctagggtgtttcaatctttcaattgaaggccatgctgaa
tgtgtgaagtttgtcaagaaatttaaaattcccctgctggtgacgggaggtggtggatac
accaaagagaatgtagcacgctgttgggctgttgaaactggagtccttctagacacagag
ctcccaaatgacatccctgacaatgaatatattaaatacttcggtccagactatacattg
aaagtaccaaatctgagcatggacaacttgaatagtaagagctatctcagttcaatcaaa
gtgcaagtgatggagagtttgcgggccatacagcatgcacctggagtccagatgcaagag
gttccacctgatttctatgtcccagactttgatgaagatgagctggatcctgacgaacgc
gtcgaccagcatacccaagacaagcagattcaccgggacgacgagtactatgaaggcgac
aacgacaatgatcatgacgatggtgcacattga
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