Lytechinus pictus (painted urchin): 129257865
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Entry
129257865 CDS
T09066
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03013
Nucleocytoplasmic transport
lpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129257865
03015 mRNA surveillance pathway
129257865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpic03019
]
129257865
Messenger RNA biogenesis [BR:
lpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129257865
mRNA cycle factors
P-body specific factors
129257865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
129257865
NCBI-ProteinID:
XP_054752267
LinkDB
All DBs
Position
3:82546125..82575365
Genome browser
AA seq
1602 aa
AA seq
DB search
MDLLKEEVAAVKEEQSEDRALDGNQTNDHGDETPNLNSSANEKPQLVTEDCNTDTSPKEK
DTEPEQIGAGNDQVSSDAKTIEDSSVAVDDGKDAVTASKDCEEQAHDDGVKDMNKGSDSQ
SDKSDKETIAPIPIPMPKVSKEISIECDKENATLRKEEKGGDTVVDDKQCKSEAQYSKGD
TKSDGVAKAEQKSLAADTTIVKENKQSEDKPKKSAEDRPGKVTGGQGNAETDPPNKERGG
KSYSAQRSGSRTGKKVEEEPKKYGKVSAEVKASDGKSGYDDKKGGQTGHRRGKESDVRSE
RGNQRARDRDKPRGDPYKDKTSSERRRETDSRGSRRREEDHHKSRGREERMKEDEEKRKK
EDEARKIQEEMKKAEDKVKREEEKKRQAEEQKRLDEENAKKREEEEEKHARDTHAEALER
KQAKMALRAKNLSAASERPDEDSFVKLDSSLKKNTAFIRKLKTLSEQQKDSLTKEFQGLN
LTKYVGEAAIAFSEAKLKMSDIASAVHLCSLFHTRYEEFSSQLLQGLQRVLPAPSKKEDK
ENKQQVVFDNKIRVELRFLAELIVNGIFTEKEGLPLLNNQLSAIMKGDRENHNYITIIIS
FTKHCGEDFAGIIARKHRLLAEKYNLELVSSEVFSTQLQTAYKNLLKDHYGSLSKYLERQ
HKDLQNMERQNRRTLQNKGELSEERRKKHEDKLAAYQKLLMNTSTMADLLDEDMPDLPVE
ELSQTELELMAIDMMRTDGQLSEFDWANSLWEDDDTRTFHENLINLRTMVPAILFKDTDN
TSNQRPGDKEDDKLDKLEDDIKALEIEADEEEAAIEEGEVIVEEEEEAVEEEMEGKAGEE
LVLEEIETADGDDDAEEGEQISNATLKMLMDAYINGLPHCVNRDHIDKSAVDFCLNLNTK
ANRKKLAKALFNVPRVRLDLLPFYSRLVATLYVCMPDIATDLVERLKSEFRWHVRKKDQM
MVESKIKVSRFIGELTKFKMCSKADTLQCLKSLIQDFRHHNIDMACALLESCGRFLYRSP
DSHLKTNALLELMMRKKSKMHLNERHSTMIENAFFYCNPPEVLKVERKVRPPMHEYIRKL
LYKDLSKVSVEKVLKQMRKLPWDNQQIKQYAVKCLSSVWNLKYNNLHCLANLLAGLVLYH
DDAGIQVVDAILEELRIGMEINHPKYNQRRVSVIKFLGELYNYRMVESSVIFKTLYSLLR
FGVILEEAGSPFDPPEHLFRIRLVCTMLDTCAQFFDRGSSKKKLDCFLVYFQQYILYKRG
LPYWTADGHPFPMDVDNAISDSIEVLRPKLKLLGSLEEANKEVEQLEKDQIQRFSSVLPE
VHLTIVQPPTGGQGLMPIMESNEDQSNLSQGMDSSMSLNDDDDETSDGEDDGRGRRAGIN
SASNSQSQNTGEEQEQEEMYGDYEESLTLDSAGEIEEDDNVTVITGGPKLLQCDEDEDFT
AAFDKMLSENIQQRNAESMKVTQLDIGVPLHIKARTALKPLNFNPFQSSAVEEPEDPGTV
NFVLMTRKGNKQQFKEFEVPVNSELAANLKNREEAEKAEKQRMKELTLHINERQEEEDYE
EMLASMQRPAMSVPQTGKSRFHHPKGAPNTEQIFNAKGNRKW
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggatctgctgaaagaagaggtggctgctgtgaaagaagaacaatcagaggacagggca
ctggatggaaaccagactaacgatcatggagatgaaactccaaatctgaatagttcagcg
aatgaaaagcctcagttggtcacagaagattgcaatacagacaccagccctaaggaaaag
gatactgaaccagaacagatcggagcggggaatgaccaagtatcaagcgatgcaaagacc
attgaggactcttctgtagctgtggatgacgggaaagatgctgttactgcatccaaggat
tgtgaagagcaagcgcacgatgatggtgtgaaggatatgaataaaggcagtgactctcag
tcggacaagtcagataaggaaaccattgctcccattccaatacctatgccaaaagtttca
aaagaaatttcaatagaatgcgacaaagaaaatgctactttacgtaaagaagagaaagga
ggtgacactgtagttgatgataagcagtgcaaatctgaagcacagtacagtaaaggggat
acaaagtctgatggggttgctaaggcagaacagaaatctttggcagctgacacaaccatt
gtcaaagaaaataagcaaagtgaagataagcctaagaaatcagctgaggacagaccaggg
aaagtcactggtggtcaaggcaatgcagaaactgacccacccaataaagaacgcggagga
aagtcctactctgcccaacgttctggcagcagaactggcaagaaggtagaagaggaaccg
aaaaagtatgggaaggtttctgctgaagtgaaggcttctgatgggaaaagtggatatgat
gataagaagggagggcagactggacataggagagggaaagaaagtgatgttaggagtgaa
agaggtaaccagagagccagggacagagataagccaagaggagacccttataaagacaaa
acatcttctgaaagaagaagagaaactgattccagaggatcaagaagacgagaagaagat
catcacaaatcaagggggagggaggagaggatgaaggaagatgaggaaaaaagaaagaag
gaagatgaagccagaaagatacaggaagaaatgaagaaagcagaagataaagtgaaaagg
gaagaggagaaaaagaggcaagccgaagagcagaaacgtctggatgaagaaaatgcaaag
aagagagaggaggaagaagagaagcatgcaagggatactcatgccgaggcactggagagg
aagcaggctaaaatggctcttagagcaaagaatctttctgcagcttctgagagacctgat
gaagattcctttgtcaagctagactccagtctcaagaaaaacactgcatttattcgaaaa
ctgaaaactttgagtgagcagcagaaagattccctgaccaaggaattccaggggctcaac
ctgaccaagtatgtcggagaggctgccatagccttcagcgaagccaagctcaagatgtct
gacattgcctctgctgttcacctgtgctctctgtttcatactcgctatgaggagttctcc
tctcagttgctacaaggactacagagggtgctccctgctccatccaaaaaagaggacaag
gagaacaaacagcaggttgtatttgataacaagatcagagttgaactacgtttccttgct
gagcttattgtcaatgggattttcaccgagaaggaaggactgcctcttctcaacaaccag
ctatctgccatcatgaaaggagatagggagaatcataattatatcaccatcatcatcagc
ttcaccaaacattgtggagaagattttgcagggatcatcgctaggaagcacaggctgctg
gcagaaaagtataaccttgagttagtatcaagcgaggtcttctctacccagctccagaca
gcttacaagaatctactgaaggaccactatggatctctttccaagtatcttgaaagacaa
cataaggatctacagaatatggagagacagaacagaaggacactgcagaataaaggtgag
ctcagtgaagagagaaggaagaaacacgaggacaagctggccgcttatcagaagctactc
atgaatacatcaacgatggcagacttgttggatgaagacatgcctgatctaccagtggaa
gaacttagccaaactgagctagagttaatggctattgatatgatgagaacagatgggcag
ctgtccgagtttgattgggctaactcactctgggaagacgacgatactcgtacctttcac
gaaaacctcatcaatcttagaaccatggttccagctattctattcaaagatacagataat
acatccaatcagagacctggagataaagaagatgacaagcttgataagttagaggatgat
atcaaagctctggaaatcgaagcggatgaagaggaagcagccattgaagaaggagaagta
atagtagaagaggaagaggaagcagtggaagaagagatggaaggaaaggctggagaagag
ctggttctagaagaaatagaaacagccgatggcgatgacgatgctgaagaaggagagcag
atcagcaatgccacactgaagatgttgatggatgcgtacatcaacggactaccacattgt
gtcaacagggatcacatagacaagtctgccgttgatttctgcctgaatctgaacaccaag
gccaacaggaagaaacttgccaaagctctcttcaatgtaccaagagtgaggttggatctt
cttcctttctactcacggctggtagctaccttgtatgtatgtatgcccgacatagcaaca
gatcttgtagaaagactcaaatcagaattcagatggcatgtgaggaagaaagatcaaatg
atggtggaatccaagatcaaagtgtcaagattcattggtgaacttaccaagttcaaaatg
tgttctaaggctgacaccttacaatgtctgaagagcctgatacaagatttccgtcatcac
aacattgacatggcatgtgccttgctggaaagctgcggaaggtttctctatcgctcgcca
gactctcatctcaagaccaatgctctcctggaactgatgatgcggaagaagagcaagatg
cacctgaatgaaagacacagcacaatgattgagaatgctttcttctactgcaacccacct
gaagtcctcaaggttgagaggaaagtgaggccaccgatgcacgagtatatacgcaagcta
ctctacaaggatctctctaaggtatcggtggagaaggtcttgaagcaaatgaggaagcta
ccttgggacaaccaacagatcaagcagtatgcggtgaaatgtttgagcagtgtgtggaat
ctgaaatacaacaaccttcattgtttagcaaacctactggcaggactggttctctaccac
gatgatgccggcatacaggtggtggatgccatcttggaagaactccgcattgggatggag
ataaaccaccccaagtacaaccaacgtcgagtgagtgttattaagtttctaggagagctc
tacaactaccggatggtagagtcaagtgtgatcttcaaaaccttgtactccctccttagg
tttggagtcatccttgaggaggcaggaagtccctttgatccaccagagcatctctttagg
atacgtttggtctgcaccatgcttgatacgtgtgctcagttctttgaccggggctcaagc
aagaagaagttagattgtttcctagtctacttccagcaatatatcttgtacaaacgaggc
ctgccgtactggactgccgacggccacccattcccgatggatgttgacaatgccatctcc
gattccatcgaagttctccgacccaagctgaagctcctgggctccctggaggaggctaac
aaggaggtggagcagctggagaaggatcagatacagagattctcatctgtgttgccagag
gttcatctgaccattgtccagccaccaacgggaggtcaggggttgatgcctatcatggag
agtaatgaggatcaatccaacttatctcaaggcatggactcttctatgtcactgaatgac
gacgatgatgaaacttcggacggggaagacgatggacgtgggaggagggcaggaataaac
agcgcctccaatagtcagagtcagaatacaggagaagagcaagagcaagaagagatgtat
ggtgactatgaagaaagtttgacactagattcggctggagagattgaggaagatgacaat
gtgaccgtgattacaggaggccctaagctgttacaatgcgatgaggatgaagacttcact
gctgcttttgataagatgctctctgaaaatattcagcaaagaaatgccgaatccatgaaa
gtcactcagctggacatcggagtacctcttcacatcaaggctcggacagccctgaagccg
ctgaacttcaaccccttccagtcctcggctgtggaagaaccggaggatcctgggactgtg
aactttgtgctgatgacccgcaagggaaacaagcagcagttcaaggagtttgaggttccg
gtcaactcggagctggctgccaatctcaagaacagagaagaggcggagaaagcagagaaa
caaagaatgaaagaattaactctacacatcaatgagagacaagaggaggaagactatgaa
gaaatgttggccagtatgcagagaccagcaatgagtgtgcctcagactggcaagtctcgt
ttccaccatcccaagggggcaccaaacacggagcaaatattcaacgccaagggtaatagg
aagtggtag
DBGET
integrated database retrieval system
