Limnochorda pilosa: LIP_2515 Help Entry LIP_2515          CDS       T04150                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism lpil  Limnochorda pilosa Pathway lpil03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:lpil00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     LIP_2515  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:lpil03400]     LIP_2515 Enzymes [BR:lpil01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      LIP_2515 DNA repair and recombination proteins [BR:lpil03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      LIP_2515 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2 Motif Other DBs NCBI-ProteinID:  BAS28345 UniProt:  A0A0K2SML1 LinkDB All DBs Position 2666780..2667742 Genome browser AA seq 320 aa AA seqDB search MGALPLLRPMLASPGEPLSSPDYLYEVKWDGFRCLAYLEEGTRLLSRRGHLLNEAFPELA GLDRWLPQGQPLILDGELVVLEGARPAIHALQERLARHGPVPGAPPASLVVFDLLYLKGR PQMDRPLEERRRALEELLAQVAARAPVHLSAPLPAAGRRLLEAASARGLEGVMAKRLASP YRPGRRSPDWLKIRRRPGLEAAVVGYTQQAGEVRSLAIARPQGDGWRYAGHVASGLSPRL GRQLLPLLERWRTPRAPVPLPLPRGAHFGPPPEVGTLWVTPRLVVEVEYLEVTSAGLLRH PSLKGLRPDKAPEELRDDRG NT seq 963 nt NT seq  +upstreamnt  +downstreamnt atgggcgcgctcccgctcctgcggcccatgctggccagccccggcgagcctctgtcgtcc cccgactacctctacgaggtgaagtgggacggcttccgctgtctggcctacctggaggag ggaacgcgcctcctcagccgccggggccacctgctcaacgaggccttccccgagctggcc ggcctggaccgctggttgccccagggccagccgctgatcctggacggggagctggtggta ctggagggggcacgccccgccatccacgcgctgcaggagcgcctcgcccggcatgggccc gttcccggggcgccgcctgccagcctggtggtcttcgacctcctctacctgaagggccgg ccgcagatggatcggccgctggaggagcggcggcgcgcgctggaggagcttctcgcccag gtcgcggccagggccccggtgcacctgtccgcgcccctgccggccgcgggccgccggttg ctggaggcggcctccgcccgggggttggagggcgtgatggccaagcgcctggccagcccc taccgccccgggcgtcgttcgcccgactggctcaagatccggcgccggcccgggctggag gccgccgtggtgggatacacgcagcaggcgggcgaggtccgttcgctcgccatcgcccgc ccgcagggggatggctggcgctatgcgggccacgtggccagcggcctctccccccgcctg ggacggcagctcctgccgctcctggagcgatggcgcaccccccgggcgcccgtccccctg ccgctcccccgcggggcgcacttcgggccgccccccgaggtcggcaccctctgggtgacg ccccggctggtggtggaggtggagtacctggaggtcacgtcggccgggctcctccgccac ccgagcctcaagggcctccggcccgacaaggcgcccgaggagctgagggatgaccgtggc tga

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