Limnochorda pilosa: LIP_3178
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Entry
LIP_3178 CDS
T04150
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
lpil
Limnochorda pilosa
Pathway
lpil00450
Selenocompound metabolism
lpil00970
Aminoacyl-tRNA biosynthesis
lpil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LIP_3178
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LIP_3178
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lpil01007
]
LIP_3178
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpil03016
]
LIP_3178
Enzymes [BR:
lpil01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
LIP_3178
Amino acid related enzymes [BR:
lpil01007
]
Aminoacyl-tRNA synthetase
Class I (U)
LIP_3178
Transfer RNA biogenesis [BR:
lpil03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LIP_3178
Prokaryotic type
Other AARSs
LIP_3178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA_bind
tRNA-synt_1e
Anticodon_3
Anticodon_1
tRNA-synt_1f
PDDEXK_1
DUF1272
Motif
Other DBs
NCBI-ProteinID:
BAS29001
UniProt:
A0A0K2SPH1
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All DBs
Position
complement(3356345..3358402)
Genome browser
AA seq
685 aa
AA seq
DB search
MCPVRPTLEKEGVLTGAPRYYITTPIYYPSDRLHIGHAYTTTIADSLARWHRLKGEEVFF
LTGSDEHGQKIERRAREEGTTPQAYVDGIVATFKDLWRRLDISYDDFIRTTEPRHEAVVQ
EVFRRLESHGDIYVSQYEGWYCVPCETFWTESRLVEGKCPDCGRDVELLQEESYFFRISR
YMPRLLEHIERHPEFIQPEGRRNEMVQFIKGGVEDLCVSRTTFDWGIPVPGHPGHVIYVW
IDALTNYITAAGFLDDPERFRRLWPADLHLVGKDILRFHTIIWPAILLALGLPLPRQVGG
HGWILTESGKMSKSKGNVTDPIQLIDEFGADRIRYFLLREVPFGQDGVFSREALIERTNA
DLANDLGNLLHRSLSMLHRYQGGEIREPGSEEPLDRELANLAAGAFGRIDRRLEALALNE
ALEELWRVVRRGNKYLDQTEPWSLARDPAGAPRLARVLYTVAEALRLVGLLVAPFLPETG
RRIWGQLGLGRSPHEAGPDQLAWGLLPAGTRVLPPEPIFPRFEREQEGDGETPARAAAEP
SKVPQPEAAQAPAPSAAPGGDGEGPSRSAPGDRDGTTTEATLDDFARLDLRLATVLKAGP
VKGADRLLKLQLDLGGEIRQVVAGIARAYRPEELVGRRVVVVANLKPVRLRGELSQGMIL
AASTPDGALGLVTVDEELPPGSRVK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
ttgtgccctgtacggcccaccctggagaaggagggggttctcacgggcgcgcctcgctac
tacatcacgacgccgatctactatcccagcgatcgcctccacatcggtcacgcgtacacc
accaccatcgccgacagcctcgcccgctggcaccggctcaagggggaggaggtcttcttc
ctcacgggctccgatgagcacggccagaagatcgagcgccgggccagggaggagggcacc
acgccccaggcgtacgtggacggcatcgtggccaccttcaaggatctgtggaggcggctg
gacatctcgtacgacgacttcatccgcaccaccgagccgcggcacgaggccgtggtccag
gaggtcttccggcggctggagtcccatggggacatttacgtctcccagtacgagggctgg
tactgcgtaccctgcgagacgttctggaccgagtcccggctggtggagggcaagtgcccc
gactgcggccgcgacgtggagcttctccaggaggagagctacttctttcgcatctcccgg
tacatgccccggctcctggagcacatcgagcgccacccggagttcatccagcccgagggt
cgccgcaacgagatggtccagttcatcaagggcggggtggaggacctctgcgtcagccgc
accaccttcgactggggcatccccgtgcccggtcacccgggacacgtgatctacgtctgg
atcgacgcgctcaccaactacatcaccgcggccggcttcctggacgacccggagcggttc
cgccgtctttggcctgccgacctgcacctggtggggaaggacatcctccgcttccacacc
atcatctggccggcgatcctcctggcgctgggcctgccgctgccccgccaggtggggggc
cacgggtggatcctcaccgagagcggcaagatgtccaagtccaagggcaacgtgaccgac
cccatccagctcatcgacgagttcggggccgaccgtatccgctacttcctcctgcgggag
gtgcccttcgggcaggacggcgttttcagccgggaggcactcatcgagcggaccaacgcc
gacctggccaacgacctggggaacctgctccaccggagtctcagcatgctccaccgctac
cagggcggggagatccgagagcccgggtccgaggagcccctggaccgtgagctggccaac
ctggccgcaggcgctttcgggcgcatcgaccggaggctggaggccctggcgctcaacgag
gccctggaggagctctggcgggtggtgcggcgggggaacaagtacctggaccagaccgaa
ccctggtcgctcgcccgggatcccgccggggcgccccgcctcgcccgcgtcctctacacg
gtggccgaggccctacgcctggtcggcctcctggtggcgcccttcctgcccgagacgggc
cggcgcatctgggggcagctgggcctcgggcgctcgcctcacgaggctgggcccgaccag
ctcgcctggggtctcctgcctgcgggcacccgggtcctgccccccgagcccatcttcccg
cggttcgagcgcgagcaggagggagacggcgagacgccggcgcgcgcggcggccgagcct
tcgaaggtgccgcagcctgaggccgcccaggcgcccgcgccctcggcagcgcccggcggt
gatggggaagggccgtcccggtccgcgccaggcgaccgggacggtacgaccaccgaggcg
accctggacgatttcgcccgcctcgacctgcgtctggccacggtcctgaaggcaggcccc
gtgaagggggccgatcgcctgctgaagctccagctggacctgggcggcgagatccgccag
gtggtggcgggcattgcgcgggcgtaccggcctgaggagctcgtgggccgcagggtcgtg
gtggtggccaacctgaagcccgttcgcctgcggggggagctctcccaggggatgatcctg
gccgcctccacgcccgacggcgccctggggctggtcaccgtcgacgaggagctgccgccc
gggagccgggtgaagtga
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