Limosilactobacillus pontis: LP475_05830
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Entry
LP475_05830 CDS
T07022
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lpon
Limosilactobacillus pontis
Pathway
lpon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LP475_05830 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpon03400
]
LP475_05830 (mutM)
Enzymes [BR:
lpon01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LP475_05830 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LP475_05830 (mutM)
DNA repair and recombination proteins [BR:
lpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LP475_05830 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
TF_Zn_Ribbon
Auto_anti-p27
FDX-ACB
zf-TFIIB
OrfB_Zn_ribbon
Zn_Tnp_IS1595
Zn-ribbon_8
zf-NADH-PPase
Motif
Other DBs
NCBI-ProteinID:
QFV01258
UniProt:
A0A5P9QII6
LinkDB
All DBs
Position
complement(1158387..1159223)
Genome browser
AA seq
278 aa
AA seq
DB search
MPELPEVETVRRGLQKIAKGRKINAIDVYYGKTITNDVEEFRQALIGQTIEDVDRRGKYL
LFRFSNDLTMVSHLRMEGQYFSQPISGPIDKHTHVVFQFTDGTELCYHDTRKFGRMTLVS
TGDEMQVGGLKTIGPEPTPEAFKLDYFAAELHKSRSKIKPFLLNQRHVAGLGNIYADEVL
WMSKINPEQPANTLTDSQIKDLHDNIIRELAQAIRYKGTTVHTFTDAFGDAGGFQERLNA
YGHGGDKCPRCGTKMIKIKVAQRGTTYCPHCQPLREEQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
ttgccagaattaccagaagtagaaaccgtccggcgtggtctgcaaaagatcgccaaggga
cgcaagattaatgccattgatgtttactacggcaagaccatcaccaacgacgtcgaagag
tttcgccaggccctgattggccagacaattgaggatgtcgaccggcggggcaagtacctg
ctcttccgatttagcaatgacctgacgatggtctcccacctgcgcatggagggccagtac
ttcagtcagccgatcagtggaccaatcgacaagcatacccacgtcgtctttcagttcaca
gatggcacggagctctgctatcacgatacccgtaagttcggccggatgactctggtgtcc
accggggatgagatgcaggttggcgggctcaagacgatcgggccggaaccgacgccagaa
gcgtttaaactggactattttgctgccgaactccataagagccggagtaagatcaagccc
ttcctcctcaaccagcgccacgtagccggcctgggcaacatctatgccgatgaggtcctc
tggatgagtaagatcaacccggagcagcctgctaataccctgaccgattctcagatcaag
gatcttcatgacaacattattagggaactggcccaggccatcaggtacaaggggacgacg
gttcacaccttcaccgatgcctttggggacgcaggcggcttccaggaacgccttaatgcc
tatggtcacggcggcgataagtgtccgcgctgtgggaccaagatgatcaagatcaaggtg
gcccagcgggggaccacctactgccctcactgtcaaccgctgcgggaggaacagtga
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