Limosilactobacillus portuensis: PRK60_03105
Help
Entry
PRK60_03105 CDS
T08838
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lpor
Limosilactobacillus portuensis
Pathway
lpor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PRK60_03105 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpor03400
]
PRK60_03105 (mutM)
Enzymes [BR:
lpor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PRK60_03105 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PRK60_03105 (mutM)
DNA repair and recombination proteins [BR:
lpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PRK60_03105 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
DZR
TF_Zn_Ribbon
zf-ribbon_3
OrfB_Zn_ribbon
zf-TFIIB
Zn-ribbon_8
zf-NADH-PPase
Zn_Tnp_IS1595
DNA_ligase_ZBD
zinc-ribbons_6
zf-ISL3
Motif
Other DBs
NCBI-ProteinID:
WCT61363
LinkDB
All DBs
Position
619917..620759
Genome browser
AA seq
280 aa
AA seq
DB search
MPELPEVETVRRGLLKIAAGRKINGINVHYGKTITNDVEQFRQSLIGQTIKTVDRRGKYL
LFRFSNHLTMVSHLRMEGSYYTQPAGTSVDKHTHVVFKFTDGTELCYRDTRKFGRMTLVK
TGDEMTVGGLKTIGPEPTATDFKVDYFKRILRRSRGKIKPFLLNQRHVAGLGNIYVDEVL
WMSGINPEQPANTLTDKQIQVLHDNIIQELSRAIEYKGTTVHTFKNAFGDAGAFQEQLNA
YGHGGDHCPRCGTKMVKIKVNQRGTTFCPHCQPLLEMKND
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagttgaaacggtccgtcggggattattaaagattgctgcagga
cggaagattaatggaattaatgttcattatggtaagacaattactaatgatgttgaacag
tttaggcagtcgctgattggccagacaatcaaaactgttgaccgtcgtggcaaatacctt
ctttttcggtttagtaatcacctaacaatggtttctcacttgcgtatggagggcagttac
tatacacaaccggcagggacttcggttgataagcatactcatgttgtttttaaatttacg
gatggaacagaactttgctaccgtgatactcggaaatttggccgaatgacactagtaaaa
actggcgatgagatgacagttggcgggttaaaaacaattggtccagagcccactgctact
gactttaaggttgactactttaaacgaatcttgcgacgaagccgtggaaaaataaaaccg
tttttgcttaatcaacgacatgttgctggattaggaaatatctatgttgatgaagtcctt
tggatgagcgggatcaatcctgaacagcccgctaacacccttactgataaacagatccag
gtcctacatgataacattattcaagagttatccagggcaattgagtataaagggacaact
gttcatacgtttaaaaatgcgtttggcgatgctggtgcatttcaggagcagttaaatgcg
tatggtcacggtggcgatcattgtccgcgctgtggtacaaaaatggtgaaaataaaagtt
aatcagcgaggaaccacattttgtccacattgccaaccattattggagatgaaaaatgac
taa
DBGET
integrated database retrieval system
