Lacticaseibacillus rhamnosus LOCK908: LOCK908_1655
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Entry
LOCK908_1655 CDS
T02731
Name
(GenBank) DNA polymerase III alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lrc
Lacticaseibacillus rhamnosus LOCK908
Pathway
lrc03030
DNA replication
lrc03430
Mismatch repair
lrc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOCK908_1655
03430 Mismatch repair
LOCK908_1655
03440 Homologous recombination
LOCK908_1655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrc03032
]
LOCK908_1655
03400 DNA repair and recombination proteins [BR:
lrc03400
]
LOCK908_1655
Enzymes [BR:
lrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOCK908_1655
DNA replication proteins [BR:
lrc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOCK908_1655
DNA repair and recombination proteins [BR:
lrc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOCK908_1655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
T2SSK
RNase_H_2
Zn-ribbon_8
YhfH
DUF655
Motif
Other DBs
NCBI-ProteinID:
AGP74293
LinkDB
All DBs
Position
complement(1621418..1625752)
Genome browser
AA seq
1444 aa
AA seq
DB search
MALSQHEMFEKLMDQLDLPADVRHDPSLADGSVQEVTIHEQSQRYDFTLAFPTILPFQIF
NTVATQLPIAFKQIAATRLTIAVAQPTITDELLAQYWQYVVQNSEIGTGIVRELCEKQVP
TLVNNRAVITAENEQIRQYLVNQGLGKLEETYQQVGFSGLRMQAQVDEEQAAQSVAAFEA
QKAAQTAKMAQAAAEVVKRQAAKQKQEPTNGPVQMGRQLKMSDPPQQMVTITQEERSVTV
EGYVFDVEVRELRSKRQLLIFKITDYSSSFIAKKFSNGADDEAMFARIKKGQWLRVRGSV
QEDNYSRELTINAQDIQTVSHPDPTDDVEGEKRVELHLHTNMSQMDATNSITDFVNRAKA
WGHKAIAVTDHAGLQAYPEAHTAADKAGLKMLYGVEINLVDDGTPVAYRAEEPRVLADAE
YVVFDVETTGLSAVYDKVIELAAVKMKDGQVIDQFEEMIDPGFPLSELTINLTHITDDMV
HGSKSEEEVFRLFQQFCDGAIMVGHNVTFDVGFLDNGYERNGLADIDNPVIDTLELSRML
HPERKNHKLDTLAKQYKVSLEHHHRANADAEATGYLLYALEKEAAKMYNMTKLNQLNDRV
GAGEAYKAARPSHAIVFAKTQAGLKNLFKLVSLSNVKYFYRVPRVPRSQLQKLREGLLVG
SACSSGEVFTAMMQKGEAEARAKAAFYDYLEIQPPAVYQPLLEADLIKGESHLKDILQKI
VKIGDDLEKPVVVTGDVHYLDQHDAIYRKILIHSQGGANPLNRHSLPDVHFRSTREMLDD
FSWLGAEKAQKLVVTNSNLIADLIDDDITPVKDKLYTPEVPGVEEKLKHDVMATAYELYG
NPLPEIVAQRLDKELKSIIGNGFSVIYNIAQRLVLKSNKDGYLVGSRGSVGSSLAATMAE
ITEVNPLPPHYRCPKCQYSEFFTHGEVGSGFDLPDKTCPKCGTELHKDGHDIPFETFLGF
HGDKVPDIDLNFSGDYQPVAHNYIKVMFGEDHSFRAGTIGTVADKTAYGYVKAYERDTGQ
QLRGAEIDRLAQGDTGVKRTTGQHPAGILIVPADMDIYDFTPIQYPADDQNAAWMTTHFD
FHSIHDNILKMDVLGHDDPTMIRMLQDLSGVEPKSIPTDDPGVMALFSGTESLGVTPEQI
NSKMGTLGIPEFGTRFVRGMLEETKPTTFSELLQISGLSHGTDVWLGNAEELIKQGIVTL
KEVIGCRDNIMMDLIHWGMDDSMAFNIMEHVRKGRGIPDDWQKAMRENENVPDWYIDSCL
KIKYMFPKAHATAYILMALRIAWFKVHYPLVYYTAYFSVRAEDFDLAAMSHGKEAVKAAM
KEITDKGMDASAKEKQLLTVLEIANECLERGFKIKMIDVTKSDSHDFLIQDDHTILAPFR
AVPGLGDNVAKQIVAAREEKPFLSKEDLANRGKVSKTLIDYMTTNHVLDDLPDENQLSLF
DGLF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
ttggctttatcccaacatgagatgtttgaaaaattaatggatcagctcgatttaccagca
gatgtgcgacatgatccatcactggcagatgggtcggttcaggaagtcacgattcatgag
cagtcacaacgctatgacttcaccttggcgtttccgacgattttgccatttcagattttt
aataccgtcgccacgcaactgccaattgcgttcaagcaaattgcggcgacgcgattgacc
attgcggttgctcagccgacgattactgacgaactattggcgcaatattggcaatatgtg
gtgcaaaattcagaaatcggtactgggatcgttcgtgaactgtgcgaaaaacaggtaccg
acgctggtgaataatcgcgcggtgataacagcggaaaatgaacaaattcggcaatacctg
gttaatcaaggattaggcaaacttgaagaaacctatcagcaagttggcttttccggatta
cggatgcaggcccaagtagacgaagagcaagcggcgcagtctgtggcggcatttgaagcg
caaaaagcagcgcaaacggcgaagatggcccaagcagctgctgaagtggtgaagcggcaa
gcggctaagcaaaagcaagagcctacgaatggcccggttcaaatgggtcggcagttgaaa
atgagtgatccgccgcagcaaatggtcacgattacccaagaagaacgttcagtgaccgtt
gaaggctatgtgtttgatgtcgaagtacgggaattacgctcgaaacggcaattactgatt
ttcaaaataaccgattacagctccagttttattgccaagaaattcagcaatggtgctgac
gatgaggcgatgtttgcccgcattaaaaaaggccagtggttgcgtgtacgcggcagtgtg
caagaggacaactattcgcgcgaactcacgatcaatgcacaagatattcaaaccgtttcc
catcctgatccaaccgatgacgttgaaggcgaaaaacgggttgagctgcatctgcataca
aacatgagccagatggatgcgaccaactcaattaccgatttcgtgaaccgcgctaaagct
tggggacacaaggcgatcgctgtaaccgatcatgctgggctgcaagcttatccagaagcc
catactgctgctgataaagctggtttaaaaatgctatacggtgtcgaaatcaatttagtc
gatgatgggaccccagtcgcttatcgagctgaagagccgcgcgtgttggcagacgcggaa
tatgttgtttttgacgtggaaacaaccggtctttcagcagtctacgataaggtcatcgag
ttagctgccgttaaaatgaaagacggtcaggtgattgatcagtttgaagaaatgatcgat
cccggttttccgctgtcagaattaaccattaacctcacgcatatcaccgacgacatggtt
cacggttccaagtctgaagaagaagtgtttcggcttttccagcagttctgtgacggtgcg
atcatggtcggacataatgtcacgtttgatgtgggcttcttggataatggttatgagcgg
aacgggctggctgatattgataatccggtcattgatacgcttgagttatcgcgcatgctc
catcccgaacgcaaaaatcacaaactggataccttggctaagcaatacaaagttagcctg
gaacaccatcaccgcgccaacgcggatgctgaggcgaccggttatttgctatacgccttg
gaaaaagaagctgctaagatgtacaacatgaccaaactcaaccaattaaatgatcgcgtg
ggtgccggtgaggcttataaggctgcccgcccgagtcatgcgattgtatttgccaaaacg
caagccggcttgaagaatcttttcaagctggtgtccttgtcaaatgtcaaatacttctat
cgggtgccgcgagtaccacgcagtcagttgcagaaattgcgagaaggtttgctcgtcggt
tcggcttgctcaagcggcgaagttttcaccgctatgatgcaaaagggtgaggctgaagcg
cgcgccaaggcagcattttatgattatctcgaaattcaaccgccagccgtttaccagcca
ttactagaagccgatcttattaaaggcgagtcgcatttaaaagatattttgcaaaaaatt
gtcaaaatcggtgatgatctagagaaaccggttgtcgttaccggtgatgttcattatctg
gatcaacacgatgcgatttatcgaaagattctcattcacagtcaaggtggggccaatccg
cttaatcgtcatagtctgcctgatgttcattttcgctcaacccgggaaatgctggatgat
tttagctggttaggcgcagaaaaggcgcagaaactggtcgtcaccaactcgaatttaatt
gccgacttgattgatgatgatatcacaccggttaaagataagctttacacgccggaagtg
cccggggtggaagaaaagctcaaacatgatgtgatggcgacggcctatgagctttacggc
aatccgttgccagaaatcgtcgcacaacgcttggataaagaacttaaaagtattatcggg
aatggattctcagtcatttataacattgcgcaacggctggtattaaagtcgaacaaagac
gggtacttggttggttcccgagggtcggttggttcgagtttagctgcgacgatggccgag
attaccgaggtgaacccattgccgccacattatcggtgtccgaaatgccagtacagtgaa
ttctttacgcatggcgaagtcggatcgggctttgatcttccggataagacctgcccgaaa
tgtggaaccgagctgcataaagacggccatgacattccatttgagacgttcttaggcttc
cacggcgataaggtgccggatattgacttgaacttttccggtgactatcagcctgtggcg
cataactatatcaaagtgatgttcggcgaagatcatagtttccgtgccgggacaattgga
acggtggccgataaaaccgcttatggttatgtgaaagcttacgagcgcgacaccggtcaa
cagttgcgcggtgctgaaattgatcgactggcacaaggcgatactggcgttaaacgtacc
actggtcagcatccggcggggatcttgattgtcccggcagatatggatatttatgatttc
acaccgattcaatacccggcggatgatcaaaatgctgcttggatgaccacccactttgat
ttccattcaattcacgacaatattttgaaaatggatgtactgggccatgatgacccaacg
atgattcgtatgttgcaggacttgtcaggggttgagccgaaatcaattccaactgacgat
cccggagtcatggcgcttttttccggaaccgagagtttaggtgtgacgcctgaacaaatc
aattccaaaatgggcacgcttggcattcccgaatttgggacccgttttgtccgcggcatg
cttgaagaaaccaagccaacgaccttcagcgaattattacagatttccggattgtctcac
gggacggatgtgtggttaggcaatgcggaagagttaatcaagcaaggcattgtcaccttg
aaggaagtcatcggttgtcgtgataacatcatgatggacttgattcactgggggatggac
gattccatggcgtttaatatcatggaacacgttcgtaaaggccggggtatcccggatgac
tggcaaaaagcgatgcgcgaaaatgaaaatgtgccggattggtatattgattcctgcctg
aagattaaatacatgttccctaaagcccatgcgacggcgtatattctgatggcattgcgg
atcgcctggttcaaggtccattatccgctggtgtattacactgcttacttttccgtgcgg
gccgaagattttgatttagctgccatgagtcacggcaaagaagccgttaaagccgcaatg
aaggagattacggacaagggcatggatgcttccgctaaagaaaagcaattgttaaccgtt
ttggaaattgctaacgaatgcctggaacgtggctttaagatcaaaatgattgatgtcacc
aagtcagattcccatgatttcctgattcaggatgatcacaccattctagcgccattccgt
gcggttcctggtttgggcgataacgttgccaagcagattgtcgctgcccgtgaagaaaaa
ccattcttatcaaaagaagacctggctaatcgcggaaaggtttctaaaactttgattgat
tacatgacgaccaaccatgttttagatgatcttccagatgaaaaccaattatcacttttt
gatggcttattttaa
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