Lolium rigidum (rigid ryegrass): 124653636
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Entry
124653636 CDS
T09103
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124653636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124653636
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124653636
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
124653636
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Topoisomerases
124653636
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
124653636
FA (Fanconi anemia) pathway
124653636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF5795
Motif
Other DBs
NCBI-GeneID:
124653636
NCBI-ProteinID:
XP_047048659
LinkDB
All DBs
Position
5:233955400..233963214
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AA seq
891 aa
AA seq
DB search
MAPRVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGMFQGSHASFRVTSVIGHVF
SVDFPPAYQNWEGTDPMDLFNAPVLRSECNPKVHIQRHLAQEARGCTYLILWLDCDREGE
NICFEVISCTGIPENEVGRRIFRAKFSSVTEKDISNAMDNLVLPNKDEALSVEARQEIDL
KVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQINTFKPEKFWSLRTY
IIKDGDEIQLEWDRKKLFDFDVTVMFQKMVASDGALKITDISVKEECKARPSGLNTVNLL
KVASSALGIGPQTAMHLAERLYIQGYIRFQKWVSLFYGKYCHLSYKHFFTTTESCIHSYP
RTESTAYPASFDFKSVLSALAHNPLWPNNVRALDAGFVKPRQGHDVGDHPPITPMRLAPE
EALETDAWRLYQYICQHFIGTVSPDCKYTRTAVEFTSGGEIFRCVGHRVTSKGFTSIMPW
LAVGENILPTFKKGDTISIHKVDIHEGSTTAPDYLSESELISLMEKNGIGTDASIPVHIN
NISERNYVQVNSGRRLVPTALGTTLIRGYQCIDADLCLPDIRSFIEQQITLIAKGKADHL
QVVQHVLQQFMRKYSYFVKKIENMDALFEAQFSPLADSGRLLSKCGKCGRYMKYISTQPM
RMYCVTCEEVYYLPQNGSIKLYKEIICPLDGFELLLFSMVGPDAKSFPLCPCCYNSPPFE
GIDKLFGALKLDDTGKVGKGAGMPCFLCPHPTCKQSMITQGVCACPECSGTLILDPVSAP
KWRLLCNTCNCVVLLPHAAHRITTTDKKCPTCESTIIEVDFNKKATPLEDGATLHEGCIL
CDELLHSLVEMKHGKSFFMRRGRGRGRGRGRGRGRRGRGRHDDPKMSFRDF
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccagggttttaatggtggcggagaagccaagcatcgcgctctccatcgcctcc
gccctctccggcggccgcatgtctacacgcaagggaagtaccgatgtccacgagtttgat
gggatgtttcagggatctcatgcatctttcagagtgacatcagtcatcgggcatgtcttc
agtgttgattttccacctgcatatcagaactgggaagggactgatcccatggaccttttt
aatgctccagtcctgagatctgagtgcaacccaaaggttcatatccaaaggcatctagcc
caggaagctcgaggctgcacctatttgatactttggcttgactgtgatcgagaaggagaa
aacatatgttttgaagtaattagttgcaccgggattcctgaaaatgaggtgggcagaaga
atatttcgagctaaattttcatctgttactgagaaagacatatcgaatgctatggataat
cttgtcttgccaaacaaagacgaggcactgtcagtggaggctcgacaagaaatagacttg
aaagtaggagtagcgtttactcgatttcagaccagatattttcaaggaaaatacgggaat
cttgactcaagagttatttcgtatggtccctgtcaaacacctacacttggattctgtgta
cagcgttatcagcaaattaacacattcaaaccagagaaattctggtctttgagaacttac
attatcaaagacggtgatgaaatacagctagaatgggacaggaagaaactttttgatttt
gatgtcactgtaatgttccaaaagatggtagccagtgatggagctctaaaaataacagat
atatcagtgaaggaagagtgcaaagcccgcccatctggtcttaatacagtgaatttgcta
aaggttgcatcaagtgcgttaggcattggaccccagacagccatgcacttggccgaacga
ctttacattcaaggatacatcaggtttcagaaatgggtctcccttttttatggaaaatat
tgccatctgagttacaaacacttttttaccactactgaaagttgcatacacagttatcct
cgtacagagagcactgcctatcctgcgtcatttgattttaaaagtgtactgtctgcacta
gcacataatcctttgtggcccaataacgtccgggcattggatgctggttttgttaagcct
cgtcaaggtcatgatgttggggatcatcccccaattactccaatgagattagcaccagaa
gaagctttggaaactgatgcatggaggctgtaccagtacatatgccagcattttattggc
actgtcagtcctgattgtaaatatacaaggactgcagttgagttcacttcaggtggagag
attttccgttgtgttggtcaccgagtcacgtccaaaggttttacatctattatgccatgg
cttgctgtgggtgagaatattcttccaacgttcaaaaaaggagacacaattagcattcat
aaggttgacatacatgagggaagcaccacagctcctgattatcttagcgagagtgagttg
atttctctcatggagaagaatggcataggcacagacgcatcaattcctgtgcatataaac
aacatttccgagcgtaattatgtccaggtaaattctggaagaagattagtacctacagcc
ctgggaactaccctgataagaggatatcagtgtattgatgctgatctctgcttgccagat
atccgaagctttattgagcaacagattactctaattgcaaaaggcaaagcggaccatctt
caagttgttcagcatgttcttcaacagtttatgagaaagtactcttattttgtgaagaag
attgaaaacatggatgctttgtttgaagcgcaattttcacctctggcagactctgggcgt
ctattgagcaagtgcggaaaatgtggtcggtatatgaaatacatttccactcagccaatg
aggatgtattgtgtaacttgtgaggaggtctattatcttccccagaatggttccattaag
ctttacaaggaaattatttgcccccttgatggttttgagttgcttctgttctcgatggtg
ggccctgatgcaaaatcttttccactatgcccctgttgctacaatagtcctccattcgaa
ggcatcgacaaacttttcggggcactcaagcttgatgatactggcaaggttgggaaaggg
gctggcatgccgtgcttcctttgcccacacccgacatgcaaacaatcaatgatcactcaa
ggagtctgtgcttgtccagagtgtagcggtacactaattcttgatccagtcagtgcaccg
aaatggcggcttctctgcaacacgtgtaactgcgtcgtgttgctcccacatgccgctcac
agaatcaccaccacagataagaagtgcccgacgtgtgagtcaactatcatcgaagttgac
ttcaacaagaaagctacccctcttgaagatggagctactttgcatgagggttgcatcttg
tgtgatgagctgttacattcgctcgttgagatgaagcatgggaagtcattcttcatgcgg
agaggcagaggcagaggtaggggtagaggccgagggagaggcagacggggtaggggaaga
catgatgaccctaagatgagcttcagagatttctga
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