Lolium rigidum (rigid ryegrass): 124662252
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Entry
124662252 CDS
T09103
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124662252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124662252
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124662252
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124662252
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-TRAF
Phosphonate-bd
Motif
Other DBs
NCBI-GeneID:
124662252
NCBI-ProteinID:
XP_047056066
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All DBs
Position
6:20180213..20181467
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AA seq
372 aa
AA seq
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MGNVGREGALAVLPAAMPTEPQLPVAARMLYFPAELLDCHAGRHPLKPPIYKCEAEHRVC
STCRVLHGEACSSALVHSQMADEFAAAARVPCGYERYGCEAGGIAYHLAAEHRSSCPHAP
CGCPEGCGFVGSRQMLLNHVSGPDHSRPIIDIRYGQEWKHSLPLSRRWYLLLGEETQAAV
AAGADRHRNVFLVSLGERGDTTAVSVVCVRADGGAPEAAQFSCRLAVEHPGDGTKVIFES
PLVTSSSLSGGAPAPGGVRSLPVPKEYLSGDSIPLSIHIHKLEPPASVTSPPTAVPLPPT
TPASPRPVAATVTVATPSPRPVAAIVTVASPPPRPVAAAATVTLALQSPATDQSNKKRKA
TNPKKFSTANRS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgtcggccgagagggagctctcgcggtgctgcccgccgccatgccgacagag
ccgcagcttcccgtcgccgctaggatgctctacttccccgcggagctgctggactgccat
gccggccgccaccccctcaagccgcccatctacaagtgcgaggccgagcaccgggtgtgc
tcgacctgccgcgtcctccacggcgaggcctgcagcagcgccctcgtccactcccagatg
gccgacgagttcgccgccgccgccagggtgccgtgcggctacgagaggtacgggtgcgag
gcgggcggcatagcctaccacctggccgcggagcaccgcagctcgtgcccgcacgcgccc
tgcggctgcccggagggatgcggcttcgtcggctcccggcagatgctcctcaaccacgtc
tccggcccggaccactcgcgccccatcatcgacatccgctacggccaggagtggaagcac
agccttcccctgtcccggcgctggtatctcctcctaggagaagaaacccaagctgctgtc
gctgctggcgcggaccggcaccggaacgtgttcctcgtgtccctcggcgagcgcggcgac
accacggcggtgtcggtggtgtgcgtcagggcggacggcggcgcgcccgaggcggcgcag
ttctcctgcaggctcgccgtggagcacccgggcgatggcactaaggtgatctttgagtcg
cccctggtaacaagcagctccctgtccggcggcgcgccagcgccaggcggggtcaggtcc
ttgccggtgccgaaggagtatttgtccggcgacagtataccgctcagcatccacatccac
aagctcgagcctcctgcttctgttactagtcctcctactgctgtccctcttcctcctact
actccggcttctcctcgtcctgtcgccgccaccgtcacagtcgccaccccttctcctcgt
cctgtcgccgccatcgtcaccgtcgccagccctcctcctcgcccggtcgccgccgccgcc
accgtcacccttgccctccagtcgccagcaacagatcagagcaacaagaaacggaaagct
acgaatccgaagaaatttagtactgctaacagaagctga
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