Lolium rigidum (rigid ryegrass): 124667173
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Entry
124667173 CDS
T09103
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124667173
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrd01002
]
124667173
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124667173
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124667173
Peptidases and inhibitors [BR:
lrd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124667173
Ubiquitin system [BR:
lrd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124667173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
UCH_1
MATH
ubiquitin
RA
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
124667173
NCBI-ProteinID:
XP_047060447
LinkDB
All DBs
Position
6:complement(79905008..79919968)
Genome browser
AA seq
1112 aa
AA seq
DB search
MTMVTPLAPEQPPPQDPDEEMLVPQQEVFEGPQPMEESVSTVDQENLPDTSTSRFTWKID
SISKHNGGKLHSDVFVVGGYSWRVLVFPTGNNVNQLSMYLDVADAKSLPTGWSRNAQFSL
AVINQLDSKHSSRKEATHTFNSRESDWGFTSFMPLMDLYDPSKGYIVNDQCIIEAEVAVR
RMTDYWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIHFFRKAVYHMPTADTPPGSIPL
ALQSLFYKLQHGDSSISTKELTKSFGWNTYDSFMQHDVQELNRVLCEKLEDKMKGTIVDG
TIQKLFEGHHMNYIECINVDYKSTRKESFYDLALDVKGCSDVYASFDKYVAVEMLEGDNK
YQSEKHGLQDAKKGMLFTDFPPVLQLQLKRFEYDFTRDTMVKINDRYEFPLQLDLDRDNR
KYLSPEADKSVRNLYTLHSVLVHSGGVNGGHYYAFIRPTLSNQWYKFDDERVTKEDMNRA
LEEQYGGEEELPHTNPGLNTNPLRFTKYSNAYMLVYVRESDKEKIICDLDETDISEHLKT
RLRKENEDKENKKKEKAEAHMFTALKVARDLDLAEQIGRHVIFDLVDYEKIHSFRVSKDM
TINQVKEELSKEFRIPAHSQRFWLWAKRQNHTFRPSRPLNQHEEANTVGHLKDTTTRLQD
SELRLYLEIVQENHLTLPLKTKDDILLFFKLYDPDKEELRYVGSLFLKASSKPSDIVQKL
NEIAGFQPDEDIELYEEIKFEPTVMCEPVDVDVSFKLSQISDGDIICYQKRCSPDSMDQH
RHPNVPSFFEYIQNRQVVHFRLLDKPKEDDFSLELSKRSTYDDVVEKVAHHLGLDDPSKL
RLTQHNPYSQQPKPQYIKYRGLDHLSDMLHHMNQMSDILYYEILDIPLPELQGLKILRVA
FHHATSSEVQFHVARLPKGNTFSDLSEDLKSKVELSRSDAELRLFQVFNNKIMKVYQPAE
KIDSINDLNGPLHVEEIPEEEKNAGPRDRLVHVIHFFKDNQLLPSLQHMQYYGDPFFFLI
HDGEALSDIKVRIQKKFQVPDEQFLKWKFAYIGYNRQEYLEDTDIVLSRFQKNIYGAWEH
SLGLEHSDMSTKRAYLASQNRHSFEKPVKIYN
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggtcactcctctcgcccccgagcagccgccgccgcaggacccggacgaggag
atgctggtgccacaacaggaggtcttcgaggggccgcagcccatggaggaatccgtgtca
accgttgaccaagaaaacttgcctgatacctcaacgtccagatttacatggaagattgac
agtatttccaaacacaacggtggaaagctccactctgatgtttttgtggtcgggggttac
agctggagagtgttggttttccctacaggaaacaatgtaaatcaactttcgatgtacctt
gatgttgctgatgccaagtcgctacctactggttggagtaggaatgcccaatttagcctt
gctgtgatcaaccaattagacagcaagcactcatcgagaaaagaagcaacacatactttt
aactctcgagaaagtgattggggttttacttcctttatgcctttaatggatctgtatgat
cctagtaaaggatatatagtgaatgatcaatgcatcattgaagctgaggttgctgtgcgt
agaatgacggattactggaactatgactccaaaaaagagaccggttatgttggtctcaag
aatcaaggagctacttgttacatgaattcgctgctccagacactttatcatattcacttc
tttcggaaggctgtataccatatgcctactgccgatacacctccagggagcattccttta
gctctgcaaagtcttttctacaaacttcagcatggcgacagtagcatttccacaaaagag
cttaccaaatcttttggatggaatacctatgattcattcatgcagcatgatgtccaggag
ttgaaccgggttctttgtgaaaagctggaagataaaatgaagggaactattgtggatgga
acaatacaaaagttgtttgaaggtcaccatatgaattatattgagtgcattaatgttgac
tataaatctactagaaaggagtcattctatgatctcgcacttgatgtgaagggctgctcg
gatgtttatgcatcttttgataaatatgtagctgtagagatgctggaaggtgacaataag
tatcaatctgaaaagcatggtctgcaggatgccaagaaagggatgctttttactgatttc
cctccagttttgcagcttcagctaaagcggtttgaatatgattttacgcgggataccatg
gttaagataaacgaccgttatgagttcccactccagttggaccttgatagagataacagg
aaatatctctccccggaagctgataagagtgtgcgcaacctctatactcttcacagtgta
ctagttcacagtggtggagttaatggtggacactactacgcctttattcgcccaaccctt
tctaatcaatggtacaagtttgacgatgaacgtgtgacaaaagaagacatgaatcgggcg
ttagaggagcagtatggtggtgaggaagagctcccccatactaatcccggactgaataca
aacccacttagatttaccaagtactcaaatgcttacatgcttgtgtacgtacgtgaaagt
gacaaagagaaaattatttgtgatttggatgagacagacatatctgaacaccttaagact
aggctaagaaaagaaaacgaagataaggagaacaagaaaaaggagaaagctgaggctcac
atgttcaccgcattaaaggtcgccagagatttagatttggcagagcaaattgggagacac
gtgatttttgatctcgtggattatgaaaagattcatagtttccgtgtatctaaagacatg
acaattaaccaggtcaaggaggagttgtcaaaagaatttcgtatccctgcacactcccag
agattttggttgtgggctaagcggcagaatcataccttcaggcccagtaggccattgaat
caacatgaggaagcaaatactgttggacatcttaaagatacaactactcgattgcaagat
tctgaactaaggttgtacttggaaatagtacaggaaaatcatttgactcttccattgaag
acaaaggatgatattttacttttcttcaagctctatgatcctgacaaagaagaactaaga
tatgttggaagtcttttcctgaaagcatcaagtaagccatctgatatagtgcaaaagttg
aatgagatagctggatttcagcctgatgaagatattgagctgtatgaggaaataaaattt
gagccaactgtgatgtgcgaaccagttgacgttgatgtttccttcaagttgagccagatt
tcagatggtgacataatatgctaccaaaaacgttgctctccagatagtatggaccaacat
cggcatcccaatgtgccatctttctttgaatatatccaaaatagacaggttgtgcatttc
agattgcttgataagccaaaagaagacgacttctctctggagctgtcaaaacgttccaca
tatgatgatgttgttgagaaagttgctcatcatcttggtctggacgatccttcaaaactc
cgccttacacagcacaacccctattcacagcaaccgaaacctcagtacatcaagtacaga
ggtcttgatcatctttcggacatgttacatcacatgaatcagatgtctgacatattatat
tatgagatactggacattcctttaccagagctgcaaggcctgaaaatattgagagttgct
tttcaccatgctacaagcagcgaggtgcagtttcacgttgcacggttgcctaaaggcaac
actttttcagatctgtctgaagatttaaaatcgaaggttgagctgtctagaagtgatgcc
gaactccggttatttcaggtcttcaataacaagataatgaaggtataccagcctgctgag
aaaatagattcaattaatgatttaaacggacctcttcatgttgaggagattcctgaagaa
gagaaaaatgctggtccacgcgaccgtttggttcatgttattcacttcttcaaagataat
cagttattgccatctttgcagcacatgcaatactatggagatccctttttcttccttatt
catgatggcgaggctttgtctgacatcaaagtgcgcattcagaagaaatttcaggtccct
gacgagcagttcctcaagtggaaatttgcttatattggctacaatcgccaggaatacctc
gaggacacggacattgtattgagccgattccagaaaaatatttatggagcatgggagcat
tccctaggactggagcactcagacatgtccacaaaaagagcatacctggccagtcagaac
cgtcattcttttgaaaagccggtgaagatctacaactaa
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