Lolium rigidum (rigid ryegrass): 124673555
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Entry
124673555 CDS
T09103
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124673555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124673555
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124673555
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124673555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
RE_HaeIII
Motif
Other DBs
NCBI-GeneID:
124673555
NCBI-ProteinID:
XP_047065566
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All DBs
Position
7:complement(342676561..342677696)
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AA seq
323 aa
AA seq
DB search
MEAGDHSGGNGKRARGDEEVKPEEGEVVMQDGEEGRNALAVVEAHAPMADQPQMDLRMDV
ALLHCQACLLPLKPPVFKCEAAGHVVCCYCRAGHGDICSRANTHCGELDAVVGAAKVPCP
YKVFGCERYVVYHESADHQRVCQCAPCACPEPGCAYMGSRGMLLDHFAAAHSRLATALRY
GRSWNLSFPLSHRWHVLVGEEDKSVFLLLLGALGAATAVSLVCVRADGAPVPQFWCKLSV
ERPGDDKDKLVLMASTVGTSALTGGAPAPGKGMFLAVPQELLYGDMLALCIRIDQLRPAA
AAPSPSPRSTTPQARIPRKTVFV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaggccggggatcacagcggcggcaacggcaagagggcgagaggggatgaggaggtg
aagccggaggaaggagaagtggtgatgcaggacggagaggaaggaagaaatgccttggcg
gtggtggaggcgcacgcgcccatggcggatcagccgcagatggacctcaggatggacgtg
gctctgctccactgccaggcctgcctccttcccctcaaaccccctgtcttcaagtgcgag
gccgccgggcacgtcgtgtgctgctactgccgggccggccacggcgacatctgcagccgc
gccaacacccactgcggcgagctggacgccgtcgtcggcgccgccaaggtgccctgcccc
tacaaggtgttcggctgcgagcgctacgtcgtgtaccacgagagcgcggaccaccagcgc
gtgtgccagtgcgcgccgtgcgcctgcccggagcccggctgcgcgtacatgggctcccgc
gggatgctgctcgaccacttcgccgccgcccactcgcgcctcgccaccgcgctccggtac
ggccgctcctggaacctcagctttcccctctcccaccgctggcacgtcctcgttggggag
gaggacaagagcgtgttcctcctgctcttgggcgcgctgggcgccgccaccgccgtgtcg
ctggtctgcgtcagggcggacggcgccccggtgccacagttctggtgcaagctctccgtg
gagcgcccgggcgacgacaaggacaagctggttctcatggcctccacggtgggaaccagc
gcgctcaccggtggcgcgccggcgccaggcaagggaatgttcttggcggtgccccaggag
ctgctctacggcgacatgctcgcgctctgcatccgcattgatcagctccgacctgccgcc
gctgctcccagccccagccccaggtcgacgacaccacaagcaaggatacccaggaagact
gtgttcgtttga
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