Lolium rigidum (rigid ryegrass): 124691585
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Entry
124691585 CDS
T09103
Name
(RefSeq) ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124691585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124691585
03036 Chromosome and associated proteins [BR:
lrd03036
]
124691585
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124691585
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
124691585
Chromatin remodeling factors
BAF complex
124691585
PBAF complex
124691585
GBAF(ncBAF) complex
124691585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Bromodomain
AAA_14
Motif
Other DBs
NCBI-GeneID:
124691585
NCBI-ProteinID:
XP_047080831
LinkDB
All DBs
Position
2:37080272..37091036
Genome browser
AA seq
2192 aa
AA seq
DB search
MQPSGGPSGSSRSSPASSPRPDQQPPTPSQQQQQAQHLGFTRNQAMMHHHEQQQQQPSYQ
PGAPHGMMGGGGSGGGFPQSSGPMLPFQGQRNMPQPGGPQGLAAGQQHSQSTMQQQQQAY
MQFLMQQQKSHGMHLQQQQQQQQQAKLNMAGPSAARDQDAAANPAKMQELMALQSQAQAQ
MFKRQQSENLQQAEKQMEHGQSGSGEQRSSDMRPPMPPQGVPGQQMSSAGMVRPMQPMQG
QAAAGSIGGIPFQAIHAWAKEMNIDLSNPANANLVSQILPVWQARMAAMQKQQSETSMAA
QQQQQQQQNQHMLPRQVSSDAPVNGNVPGQPPLKPRQPLPPSSSVSVGAETKVMNPSNLQ
MQQQFSAHNRESPNERAVRPPMTMGNTGQMMQMTQSSGPVNKISEQPNPKNTITTSEAMQ
MQYAARQMQQGNRAATPTATPADTAGPQAPTQGARPHSSFTKHQLHVLKAQILAFRRLKR
GDRTLPPEVLELIMSPPPPPPDSKPQLVAGPPVTLNRENSATVAADEHGRPMESGDKAPE
KPTLLKGPSLPKVEVSPSEDKTGSVSGPMQVMKVSPKEPLRIGPVSAPEQNNAAPVKSEQ
EPDKGIQRTPVRSDNSGERGKSVPAESGSADAEQAKRAASTSSAPSPRDVPRKYHGPLFD
FPSFTRKHDSLPPANYNVSLALGYDVKDLLAKEGMIVLGKKREDSLKKISGLLSFNLERK
RIRPDLVLRLQIEEKKLKLLERQARMRDEVEEVQQEIMAMPDRIYRKFVKQCERQRIELI
RQVQQMQKASREKQLKSVFQWRKKLLEAHWAIRDARITRNRGVAKYHERMLREFSKKKDD
DRSKRMEALKNNDVERYRQILLEQQTSVPGDAAQRYNVLSSFLSQTEEYLYKLGGKITAA
KNHQQVEEAANAAAAAARAQGLSEEEVKAAAQCAGQEVMIRNQFSEMNAPKENTSVNKYY
TLAHAVSERVTKQPSLLRLGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMAL
IAYLMEFKGNYGPHLIIVPNAVLVNWKSELLNWLPSASCIFYVGAKDQRQKLFSQEVMAV
KFNILVTTYEFVMFDRSKLSKIDWKYIIIDEAQRMKDRESVLARDLDRYKCQRRLLLTGT
PLQNDLKELWSLLNLLLPEVFDNRKAFQDWFSKPFQRDAPTPSEEDDWLETEKKVIIIHR
LHQILEPFMLRRRVEDVEGSLPRKDSIVLRCKMSAVQGAIYDWIKSTGTIRVDPEDEKIR
IQRNPMYQPKSYKNLQNKCMELRKVCNHPLLSYPFMNYYGKDFIIRSCGKLWNLDRILIK
LHRSGHRVLLFSTMTKLLDILEDYLQWRQLAYRRIDGTTSLEDRESAIVDFNRPGSECFI
FLLSIRAAGRGLNLQSADTVVIYDPDPNPQNEEQAVARAHRIGQTREVKVIYMEAVVDNI
SSYQKEDELRNGGSGDLEDDLAGKDRYMGSIESLIRSNIQQFKIDMADEVINAGRFDQRT
THEERRMTLETLLHDEERYQETLHDVPSLQEVNRMIARNEAEVELFDQMDEEFDWTGDMM
KHNQVPKWLRVSSTELDCVVASVTKKPSRNASGSSAPDTKLEKRRGRPTEAGKYSIYREY
DDDEDDEESEEDDEERNTSPPPEEGETGEYEDDEENDDSAPDDNKEDQSDPEEEEPINDD
GYGFQRGTGSGKAHKSEEAGSTGSSSGSRRLPPPAPSSSLKKLRSLSALDARPGTFSKIT
TDDLEEGEIALSGESNMDLQQSGSWNHERDDGEDEQVLQPKIKRKRSIRSRPRPSAEKQE
DRSGVDGAFHQRGARLLFSGDGDYDSQLKSEQDAHALAGPTSRQQDAVHPIVKQKRNMPS
RKAPPASRAGKSSHLSGSAKVTDSKMSDSMQRKCKNVISKLWRRIDKEGHQIIPNIASWW
RRNENPSSKGVAGNTLDLQKIELRVDGFEYGGVAEFIADMQQMLKSVVQHFSYRHEVRVE
AETLHNLFFNIMKIAFPDSDFQEVKDSMSFANPGGGVNSSAALSAKHSGPGHKQRRSTAT
DAEQHGSGSGKHSQHTSVGEAPSRVKPERHSGPGSRDPNLGTAGLLPHPGDLFIVKKKRQ
ERMRGSIGSPSSSGRGPLSPPSNPGRMGPSPSPRGARTPFQRDPHPSQQGMPGWGAHSDR
GGSSSPGIGDIHWAKPAKRQRTDSGKRRPSQM
NT seq
6579 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccagcgggggcccctccggcagctcgcggagctcgccggcgtcgtcgcccagg
ccggaccagcagcctccgacaccgtcacaacagcaacagcaggcgcagcacctagggttt
accaggaaccaggcaatgatgcatcaccatgaacagcagcagcagcagccatcgtaccag
ccgggtgcaccacatggtatgatgggagggggtggcagcggcggcggcttccctcagtcc
tcgggcccgatgctgccgttccagggccagaggaacatgccgcaacccggtggaccgcag
ggcctggctgcgggccagcagcacagccagagcacgatgcagcagcagcagcaggcatac
atgcagtttctgatgcagcagcagaagtcccatgggatgcacctccagcagcaacagcag
cagcagcagcaggcgaagctgaatatggcaggaccgtctgctgcgagggaccaggatgcg
gctgccaacccagcgaagatgcaggagctcatggcccttcagtcccaggcccaggcgcag
atgttcaagaggcagcagtctgagaatcttcagcaggcggagaagcagatggaacatggg
cagtccggcagcggcgagcaaaggagcagtgatatgaggccacctatgccaccacaagga
gtccctgggcagcaaatgtcgtcagcgggcatggtgaggccgatgcagccgatgcaaggc
caggcggcagcgggcagcattggtggtatccccttccaagctatccatgcctgggcaaag
gagatgaacattgacctgtctaatcctgcaaatgccaatctcgtttctcaaatattacct
gtttggcaggccaggatggccgccatgcagaagcagcagagtgagacgagcatggctgca
cagcagcagcagcagcagcagcagaatcagcacatgcttcctaggcaggtgagcagtgat
gccccagtaaatgggaatgttcctggtcagcccccattgaagcccaggcagcctctcccg
cctagctcttcggtttctgttggagcagagaccaaggtgatgaatccaagcaacttgcag
atgcagcaacagttctcggcgcataacagggaaagcccaaatgagagggctgtgaggccg
cccatgactatgggaaacactgggcaaatgatgcagatgacccaaagttctggacctgtg
aataagatttctgagcagcccaatccaaagaataccattacgacctcagaagcgatgcag
atgcagtatgcagcaagacagatgcagcagggtaaccgagctgccacccctacagcaacc
cctgctgatactgcaggaccacaggccccaacacaaggtgctcggccgcattcgagtttc
actaaacatcaacttcatgtacttaaagctcaaatattagcttttcggcgtttgaagcgt
ggtgatcgtacacttccaccagaagttcttgaattaatcatgtctcctcctccgccgccg
ccagactcaaagccgcagctggtcgctggacctccagtaactcttaatcgtgagaattct
gctacagtcgccgctgatgaacatggaagacccatggagagtggtgataaagctcctgag
aaacccacattgttgaagggcccctctttgccgaaggtggaggtttctccttcggaagac
aaaactggttctgttagtggtcccatgcaagtgatgaaagtttcacccaaggagcctctt
agaattgggcctgtttcagcacctgagcaaaataacgccgcccccgttaaatctgagcag
gaaccagataagggtatccagagaacacctgtgagaagtgataacagtggtgaaagggga
aaatctgtaccggctgaaagtggttcagcagatgctgagcaggcaaaaagagctgcctct
acaagtagtgcaccatctcccagggatgttcccagaaagtatcatggtccattatttgat
tttccgtccttcactaggaaacatgattccttgccccctgcaaattacaatgttagtcta
gcacttggttatgatgtgaaggacttattggccaaggaaggcatgatagttcttggcaag
aaacgagaggatagcttgaaaaagattagcggcttgctttcatttaatctagagaggaag
agaatccgaccagatcttgtattgaggttacagattgaagaaaaaaagctgaaactccta
gagcgccaggctcgtatgagggatgaagttgaagaggtgcaacaggaaataatggcaatg
cctgataggatatacaggaaattcgtcaagcaatgtgaacgtcaacgcattgagcttata
aggcaagttcagcagatgcaaaaggcctcaagagagaagcagctgaagtctgttttccag
tggcgtaagaagcttttggaagcacattgggctatacgtgatgcacgaataactcgtaac
aggggggtggccaagtaccatgaaagaatgttaagggaattttcaaagaaaaaagatgat
gatcgaagcaaaagaatggaggcactaaaaaacaatgatgtggaaagatatcgtcaaata
ctgttggaacaacaaactagtgttcctggcgatgcagctcaaagatacaacgttttatct
tcattcttatcccagactgaagagtacctttataaacttggagggaaaattactgctgcc
aagaatcatcagcaagtagaagaggcagcaaatgctgcagcagcagctgcacgggcacag
ggtctttctgaagaagaagtgaaggctgctgcacaatgtgctggtcaggaggtcatgata
aggaaccaattctcggagatgaatgcaccaaaggagaacacttctgttaacaagtactat
actttagctcatgctgtgagtgaaagagttacaaagcagccctcacttttgcgattagga
actttgagagactaccaactggtgggccttcagtggatgctttcgttgtacaataataaa
ttgaacggcattttggctgatgagatgggtcttggcaagactgtacaggttatggcgttg
attgcatacctgatggagtttaaagggaattatggaccacatctcattatagtgccaaat
gctgtcttggtgaactggaagagtgaactgctaaactggttaccatctgcatcttgcatc
ttttatgttggtgcaaaggatcaaaggcaaaagttgttctctcaggaagttatggctgtc
aaatttaatattcttgtaacaacatatgaatttgttatgtttgatcgttccaagctttca
aaaattgattggaagtacattataattgatgaggcccaacgtatgaaagatagagagtca
gtattggcacgtgatcttgatcgctataaatgccagcgccgtctccttctcactggcact
cctctacagaatgatctcaaggagctttggtccctcctgaatttgttgctacccgaagtc
tttgacaatcgcaaggcatttcaagattggttctcaaagccttttcagagggatgctcct
acacctagtgaagaagatgattggttagagaccgagaagaaagtgattattattcacagg
ctgcatcaaattttggaaccttttatgctacgtaggcgcgttgaagatgttgaaggctca
cttccaaggaaggattctattgttttgaggtgcaaaatgtctgccgttcaaggtgctata
tatgattggatcaaatccactggcaccatcagggttgatcctgaagacgagaaaatacgt
atacaaaggaatccaatgtaccagcccaagtcatataagaatctccaaaacaaatgcatg
gaactgaggaaagtttgtaaccatcctttgctgtcatatccttttatgaactactatggg
aaggattttattattagatcttgtgggaagttgtggaatcttgataggattctcattaag
cttcataggtctggtcatcgtgtactcctctttagcactatgaccaaacttcttgacatc
ctggaggactatctgcaatggaggcaacttgcttacaggcgaattgatggaacaactagc
ttggaagaccgtgaatcagcaattgttgatttcaataggccgggttctgaatgttttata
ttcttgcttagtatccgcgctgctggcagaggtctgaatcttcagagtgcagacactgtt
gtaatttatgaccctgatccaaacccacaaaatgaagaacaagcagttgccagggcccat
cgtatagggcagactagggaggtaaaggttatttacatggaggctgttgttgataatatc
tcaagttatcagaaagaggatgaattaaggaatggaggaagtggagatttggaggacgat
cttgctggaaaggacagatacatgggttcgattgaaagtctcatccgcagcaatatccaa
cagttcaagattgatatggcagatgaagtcattaatgctggtcgttttgatcaaagaacg
acccatgaggaaaggcgcatgactttggagaccctactgcatgatgaagagaggtatcaa
gaaactcttcatgatgttccttctctacaggaagttaatcggatgattgctcggaatgaa
gctgaagttgagctctttgatcagatggatgaagaatttgattggacaggagatatgatg
aaacataatcaggttccaaagtggctccgcgttagttctacagagcttgactgtgtcgtt
gcaagtgtaaccaaaaagccttccagaaatgcgtctggcagcagtgctcctgacactaaa
cttgagaaaagaaggggtcgaccaacggaggctggtaagtactccatctacagggagtat
gatgatgatgaagatgatgaggaatccgaggaagatgatgaagagaggaatacatcacct
ccccccgaagaaggtgaaacaggagaatacgaagatgacgaggaaaatgatgattcagca
ccagatgataacaaagaagatcaatctgacccggaggaagaagagcctatcaatgatgat
ggatacggttttcaacgtgggacggggagcggaaaagctcataagtctgaagaagctggt
tcaacaggatcttcatctggaagccggagattaccaccacctgccccttcgtcatctttg
aagaagctgcggtctttatctgcattagatgcccgcccaggcactttttcaaaaataact
acagatgacctagaggaaggagagattgcattatcaggggagtcaaatatggatctacag
cagtcaggcagctggaaccatgaacgagatgacggtgaggatgaacaggtgctgcaacct
aaaataaaacgcaaaaggagtatccgttctcgtccaagacctagtgctgaaaaacaggaa
gatagatctggtgtagatggtgctttccaccaacgcggtgctcgccttttattctctgga
gatggtgattatgattcacagctgaaatctgagcaagatgcccatgctttagcgggtcct
acttccaggcagcaagatgcagttcatccgatagtgaaacaaaagcgtaacatgccatct
agaaaggcccctcctgcttctagggctggtaaatccagccacttgtctgggtctgccaag
gtcactgattctaagatgtctgacagtatgcaaagaaagtgcaagaatgtaataagcaag
ctttggaggaggattgacaaggagggccaccaaatcatacccaacatagcttcttggtgg
cgaaggaatgaaaatccctcatccaaaggtgtggctggcaacacccttgacctacagaaa
attgaacttcgggttgatggattcgagtatggcggtgtagctgagttcatagcggacatg
cagcaaatgttgaaaagtgtggttcaacatttcagttacagacatgaggttcgagtagaa
gcagagactctccataacttatttttcaacatcatgaagatcgcattcccagactctgac
ttccaagaggtcaaggactcaatgtcgtttgcaaatccaggaggaggggtgaacagcagc
gctgccctatcagcaaagcactcaggtccaggtcataagcagcgccgttctaccgccacc
gatgctgagcagcatggttccggcagtggcaagcatagccagcacacctcggtcggcgag
gctcctagccgggtcaaacctgagaggcattctggacctggtagcagggatccgaacctt
ggcacagcggggctgttgccacaccccggcgatctgttcatcgtcaagaagaagcgacag
gagcggatgaggggcagcattgggtctccatccagctcaggccgaggaccactctcccca
ccaagcaaccctgggcgcatgggcccgtcgccctcccccagaggcgcgaggacgcccttc
cagagggacccccacccgtcacagcagggcatgcctggatggggtgcacactccgaccgc
ggagggagctcgtcgcctggcatcggagacatccactgggccaagcctgcaaagagacag
cggactgacagcggcaagaggcggccgagccaaatgtga
DBGET
integrated database retrieval system
