Lolium rigidum (rigid ryegrass): 124707096
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Entry
124707096 CDS
T09103
Name
(RefSeq) pre-rRNA 2'-O-ribose RNA methyltransferase
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124707096
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124707096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Plexin_RBD
Motif
Other DBs
NCBI-GeneID:
124707096
NCBI-ProteinID:
XP_047094707
LinkDB
All DBs
Position
4:220384796..220389357
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AA seq
850 aa
AA seq
DB search
MGKTKGKQRQDKYYHLAKEQGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVA
VKHAPVGAFVVGVDLVPIRPIRGAHSLTEDITTSKCRSSVRKLMDSRGVAAFDVVLHDGS
PNVGGAWAQEATTQSALVIDAVRLATYFLAPKGAFITKVFRSQDYNAIMFCLKQLFEKVE
VTKPQASRGTSAEIYIICLKYKAPAKIEPELLDIKHLFNVENEKKMPRDVLTTKKDKRSR
EGYEEGVTVLEKVGLASDFIFSEAQTPLEFLGSVTKISFDDPASLPLKNHEITTEEINKL
CEDLRVLDKNSFKHILKWRIRLRKALSSSSQVTPKAAVTATESKVIDDDQLLQEMEELTS
VIDRKKRQDKKRQSRRKAKDKARKATGMQIDATEEGYGDPDLFSINAIKGGKELKAVESA
EFDVEDGSGDSENEATQTHEDSDEEMDSDEEQQRYDAQLEDILDEAYERFMTKRGGEVKQ
ERKRAKRVNTDADADLLEGGEDDGEDVDMDDEGSDEDQDEDEEANPLLLRLDAEKRTKDE
IVDQWYSQDVFADAGTGLAEQSDSDDEREKPRKNMKKKIDSGNKEKPAKAQTDLGKKEKP
TKAAQRLQQDDIEMVPVEPVRTEDDSDSSSSSDESEPEEDLDDDQKAEVLAYAHKMLRKK
QREQILDDAYNRYMFDDEGLPKWFAEDEKRHTQAMKPITKEEVAAMKAQFREIDARPSKK
VAEAKARKKRVALKKLEKARQKADIVADQSDINEQSKAKMIDKIYRKAVSTQRPKKEYVV
AKKGVQVRTGKGKVLVDPRMKKDKRAEKAGKKKGKGKGGKGGAKGGKGKKGAAGGGQKKG
GMRGKAGGKA
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagacgaaggggaagcagaggcaggacaagtactaccacctcgccaaggagcag
gggtaccggagccgggcggcgttcaagctgctgcagctggacgcgcgcttccgcttcctc
ccgacggcgcgcgccgtgctcgacctctgcgcggcgccgggcgggtgggtccaggtggcc
gtcaagcacgcgcccgtcggcgccttcgtcgtcggcgtcgacctcgtgcccatccgcccc
atccgcggcgcgcactccctcaccgaggacatcaccacctccaagtgccgctcctcggtc
cgcaagctcatggactccaggggcgtcgccgcattcgacgtagtcctccacgacggctcc
cccaacgtcggcggcgcctgggcgcaggaggccaccacgcagtccgcgctcgtcatcgac
gccgtgcgcctcgccacatacttcctcgcacccaagggcgcgttcatcaccaaggtcttc
aggtctcaagattacaatgcgatcatgttctgtcttaaacagctatttgagaaggttgag
gtgaccaaacctcaagcgagtcgtggcacatctgctgaaatttatattatctgtctgaaa
tataaagcccctgccaagattgagcctgaacttcttgatatcaagcacttattcaatgtg
gaaaatgagaagaagatgcccagggatgtacttactactaagaaagacaaaagaagccgt
gaagggtacgaggaaggagtcacggtattggagaaagtcggcctggcgtcagattttata
ttttccgaggcccagacaccactggaatttcttggttctgttactaaaatttcatttgat
gatccagcatctctgcctctcaagaatcatgagattactacagaggagataaacaagctt
tgtgaggatttacgtgtgctggataaaaatagcttcaagcatattttgaagtggcgcata
cgcttaaggaaagcactgtcgtcatcatcacaagttacaccaaaggctgctgttactgca
acggagtctaaagtcatagatgatgaccaacttttacaggaaatggaagaattgactagt
gtcattgacagaaagaaaaggcaagataagaagcgccaatcaaggcgaaaagcaaaggat
aaagcacgcaaggcaacaggaatgcaaatcgatgctacagaagaaggatatggtgatcct
gatttgttctctattaatgctatcaagggtggaaaagaactaaaagctgttgagtcagca
gagtttgatgtggaagatggctctggagacagtgagaatgaagcgactcaaactcatgaa
gactctgatgaggaaatggattctgatgaagaacaacagaggtatgacgctcaacttgag
gatatactcgatgaagcttatgagcgttttatgacgaaaagaggtggagaagtaaaacaa
gaacgcaaacgtgccaagcgagtcaatactgatgctgatgcagatttgttagagggaggt
gaagatgatggtgaggatgttgacatggatgatgaaggttctgacgaagatcaagatgaa
gatgaagaggccaacccccttttattgcgtctagatgctgagaagcgaacaaaagatgag
attgtagaccagtggtacagtcaggatgtgttcgcggatgcaggaactggcctagctgag
cagagtgacagtgacgatgaaagagagaaaccacgcaagaatatgaaaaagaagattgat
tcaggaaataaggagaagcctgctaaagcacagacagatttaggaaagaaggagaaaccg
actaaagctgctcagcgcttgcaacaagatgatattgagatggtaccagtagaaccagtc
cgaactgaagatgattccgactcttcttcgtcttccgatgagtcagaaccagaagaggac
ctcgacgatgaccagaaggctgaagtgctggcctatgcacataagatgctgaggaagaag
caaagggagcagatactagacgatgcctacaacaggtacatgtttgatgacgaaggactg
cccaaatggtttgcggaagacgagaagaggcatacccaggctatgaaacctataacgaaa
gaggaggtagctgccatgaaggcccagtttagggagatcgacgcccggccgtccaagaag
gtggctgaggccaaggcccggaagaagcgcgtcgccttgaagaagctggagaaggcgcgg
cagaaggcggacattgttgcggaccagagcgacatcaacgagcagtccaaggcaaagatg
attgacaagatctacaggaaggcggtgtcgacgcagaggcccaagaaggagtatgtcgtc
gccaagaagggggtccaggtgaggactggcaaggggaaggtgctggtggacccacggatg
aagaaggacaagcgggcagagaaggcagggaagaagaaggggaaggggaagggtggcaag
ggtggtgccaaaggcgggaagggaaagaagggtgccgcgggtggtggccagaagaaagga
ggcatgagaggtaaggctggcggcaaagcttga
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