Lolium rigidum (rigid ryegrass): 124707137
Help
Entry
124707137 CDS
T09103
Name
(RefSeq) homeobox-DDT domain protein RLT2
Organism
lrd
Lolium rigidum (rigid ryegrass)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WSD
Homeodomain
DDT
HARE-HTH
WHIM1
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124707137
NCBI-ProteinID:
XP_047094757
LinkDB
All DBs
Position
4:223315990..223328547
Genome browser
AA seq
1855 aa
AA seq
DB search
MDSSGDGGDEGAGPAQGSPAPASSAPPAAGAAAAGASGSSGKLPAKRVMKTPYQLDVLER
TYAEDPYPNETMRVELSVRLGLTDRQLQMWFCHRRLKDRKLPGRRQQQQEDEEVPVPVMA
PPPMLQQPLPHGELTLGSASAYGQQLLPSSRRGPGRSSAVPRISAPEVGRRYYEPQQLML
PPVAPVQITRAAQQVVDTVEHLIGEPLREDGPMLGLTFDPPPPGAFGAPIVQEQPKQTFR
SRETNMFSGHDPKLMKASTFLPNIDPSVPSTVTGKRKYMAANSSQLGSRAVHEYQFLPEQ
PSEIYERTSQSRFYDVSPEASNSRISSLSAGSRLLHGSEQVPSYAYHGQISGSSHLNQHG
KAFISQSGSTDYEMASSNINVSSAPIEGQFGIPQVAGFENPPASSEGVDYHDEDAYRLDR
KRKYTEESKIAKEVETHEKRIRKELEKQDVLKRKREEQMRKEVERLDRERKKEEEKFMRE
KQREEERLQKEKWRENKRMEKFLVKESMRAEKLRQKEELRKEKEAARQKVANEKATARRI
AREYMELMEDERLELMELVSRSKGLPSMLSLDSDTLQQLDSFRGMLTQFPTEAVILKVPF
SIKPWTSSESNIGNLLMVWKFFFTFADVLELPSFTLDEFVQSLHDYDSRLLGELHVGLLK
CIIKDIEDVARTSSVVSGVNQSSSVNPGGGHPQIVEGAYAWGFNILIWQRHLTCLTWPEI
LRQFGLSAGFGPQLKKRNAEAAYHDDNEGHNSEDVISTLRNGSAAVKSAALMKERGYTNR
RKSRHRLTPGTVKFAAFHVLSLEGSEGLSILEVAEKIQNSGLRDLTTSKTPEASISAALS
RDTKLFERTAPCTYCVKTPYRKDPADSESVFSAAREKIRVFQNAILECEEVEKDVDDAER
GDDDSECDEADDDPDGDEVNIEEKDANASLVRSKDDGIPTAAGDINDEVKSVVNTSMPPS
PHSKSPSDSLLALDKSTAVSTSSDPPIGVSQDTEIDESNQGESWVQGLSEGDYSDLSVEE
RLNALVALIGVANEGNSMRAVLEERLEAANALKKQMWAESQLDKRRSREEFAGRVQHYSC
TSLKADADQENNIGECTLNPVHNLIKENGGEASSVNNDSLVDQQSQLNAGNMVHEGNGVS
RESNTNPESLSVQQYASSEKTRSQLKLFIGHKAEQLYVYRSLPLGQDRRRNRYWQFSTSL
SPNDPGSGRIFFESVDGYWRLIDSAEAFDALVASLDTRGIRESHLHSMLQSIEATFKDAI
GRKKCATIEQPAGRILRNGSSELISPNYSNEFGSPCSTLSGVVSDPAMACSGSFKIELGR
NDLEKVAISKRACIFLKWMWRECNNHQSMRAMKYGKKRCSELIHCCDYCYQIYLTEEKHC
SSCHKTLKSIHNFSEHTSQCEEKRRTDANWKIQISDDSVPIRLRLLKLLLATFEASVPAE
ALQLFWTDGYRKSWGVKLLSTSSIEEVFQMLTVLEGALRRDYLSSNFETTAELLKSNIPD
FADQNFIARSESVDVLPWVPDTAAAVTLRLLDLDSALSYTLEQKAGLNKEREAGDFIKFP
SRYTAVKNKQEVELVGATGFDHHDGARLTSSNGRGRGGRGRGRGGGRGRGRGGRSLSRGG
KLPRDSSNSPKVEFRDDNDVSYNKAPYKQVGRGRGRGRGRGRGRGRGRGPRTVRPRQPAE
LGARSVPKANLLGSFGMLSTSKPTTVHSPQSSGAEEWGLERRANAEVDENNSVSQSDESE
GNEEYDQPMHEDSDEQLPDYSRDNSASSPLQMMDDESEDNGEDDEDNGEDDEEGEDGVDY
DAEHPVDEGNDDTEMSGDEELDDDDEDDDDGGGQGGVGNINDDEDGSSYSSEYSE
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atggattcctccggcgacggaggggacgagggggccgggccggcgcaggggagccctgcc
ccggcgtcgtcggcgccgcccgcggcgggggctgccgccgctggggcctccggatccagc
gggaagttgccggccaagcgcgtgatgaagacgccctaccagttggacgtcctcgagagg
acgtacgcagaggacccgtacccgaacgagacgatgcgggtggagctgtctgtgaggctg
gggctgacggacaggcagctgcagatgtggttctgccaccggcggctcaaggaccggaag
ctgccggggaggaggcagcagcagcaggaggacgaagaggttcccgtgccagtcatggcg
cccccgcccatgttgcagcagccgctgccgcacggcgagctgacgctgggttctgctagc
gcgtatggtcaacagctgctgccctcctcccggagagggcctggccgctcgtctgctgtg
ccaaggatttctgccccggaggttgggaggaggtactatgagccacagcaacttatgctg
cctcctgtggcaccagtgcaaatcacgcgagccgcgcagcaggtggtcgatactgtggag
catctcataggggagccgctgagggaggatgggccaatgcttggtcttaccttcgaccca
cctcctcctggtgcatttggagcgcctattgttcaagagcagccgaagcagacttttcga
tcacgtgagaccaacatgttttctgggcatgatcccaagctcatgaaggcatcaacgttc
ttacctaacatagacccttctgttccaagtacagttactgggaagcggaagtacatggct
gcaaattcttctcaacttggctcacgagcagtacatgaataccagtttcttccggagcag
ccaagtgaaatatatgagaggacaagccagtcacgcttctatgatgtttcaccggaagct
tcaaattcaaggatatcttctctgtctgcaggatcacgcttactccatggttcagagcaa
gtaccgagctatgcctatcatggtcaaatttctggttctagccatttaaatcaacatgga
aaagcgttcatttcccagtccggatccacagattatgagatggcttcatctaatattaat
gttagttctgctccaatcgaaggccagtttggcattcctcaagttgctggatttgaaaac
ccccctgcatcctctgaaggagtggattatcacgatgaagatgcatatcgactggataga
aagcggaaatataccgaggaatcaaagattgcgaaggaagttgagactcatgaaaaacga
attagaaaggaactcgagaaacaagatgtattgaagagaaagagagaagaacaaatgcgg
aaggaggtggagagacttgaccgtgaaagaaagaaagaagaggagaagtttatgcgtgaa
aagcagagagaagaagagagactccaaaaggaaaaatggcgtgaaaacaagcgcatggag
aagtttttggtgaaagaatccatgagagctgaaaaactacgacaaaaagaggagcttcga
aaggagaaagaagctgcaagacaaaaggttgctaatgaaaaggctacagcacgcagaatt
gcacgggagtacatggaactgatggaagatgagcgcctagaactgatggaactggtttca
cgaagcaaagggttgccctcgatgctttctcttgatagtgacacattgcagcaacttgat
tcatttagaggaatgctgacacagtttcctactgaagctgtgatattgaaggtgccattt
tcaataaaaccgtggacaagttctgagagtaacattggaaaccttttgatggtgtggaag
tttttctttacctttgcggatgttctcgagcttccatcattcacacttgacgagtttgtc
caatctcttcatgattatgattcaaggttgttgggggaattacatgttggtttgctaaaa
tgcatcataaaagatattgaggatgttgcccgaacttcttcagttgtttcaggggtgaat
cagagcagttcagttaatcctggaggtggacatccacaaattgttgaaggggcatatgct
tgggggttcaacatactcatctggcagcgacacttgacttgtcttacgtggcctgaaata
ttgcgccaatttggtttatctgctggttttgggcctcagttgaagaaaaggaatgctgaa
gctgcataccatgacgataatgagggccataacagtgaggatgttatttccactctgcga
aatggttcagcagctgtgaagtctgctgctttgatgaaagaaagaggctacactaatcgt
cgcaagtctaggcaccgtctgacacctggaacggtaaaattcgctgctttccatgtacta
tcacttgaagggagtgaaggtctctcgatactggaagttgctgaaaaaattcagaattct
ggactgagagatcttacaacaagcaagacacctgaggcatccatatctgctgcattgtca
agggataccaagctttttgaaagaactgcaccctgcacatattgtgttaaaactccttat
agaaaagacccagctgattctgagtctgtgttctcagcagcacgggaaaaaataagggtg
tttcagaatgcaattttggagtgtgaagaagtagagaaggatgtggatgatgctgaaagg
ggggatgatgattcggaatgtgacgaggccgatgatgatcctgatggcgatgaagtgaat
atagaggaaaaagatgccaatgcttcattagttaggtcgaaagatgacggcataccaact
gcggctggtgacataaatgatgaagtaaagagtgtggttaacacatcaatgccaccaagc
cctcacagtaaatctccaagtgactcattgcttgcgctagacaagtccactgcagtgagt
acttcaagcgatccacctattggggtttcacaagacacagagattgacgaaagtaaccaa
ggggaatcctgggttcaggggctatctgaaggcgactactctgatcttagtgtcgaggaa
cgcctcaatgcattggttgcattgattggtgttgccaatgaaggaaattccatgcgcgca
gtcctggaggaacgtcttgaggcagcaaatgctttgaagaaacaaatgtgggcagagtca
caacttgataaaaggcgttcaagggaagaatttgcaggcagagtgcaacattactcttgc
accagtttgaaggctgatgctgatcaagaaaataatatcggtgaatgtactcttaatccg
gtacataacctcatcaaagagaatggtggagaggccagctcagtaaacaatgattcgctc
gtagaccagcaaagtcagcttaatgctggtaatatggttcatgagggaaatggtgtaagc
agggaatccaataccaacccagagagcttgtctgttcagcaatatgcttcatctgagaaa
acacgatctcagttgaaattatttataggtcacaaggcagaacagctttatgtctacaga
tcattacccctaggacaagatcggagacggaatcggtattggcagttttctacttctcta
tcacccaatgaccctgggtctggaaggatattttttgaatctgtagatggatactggagg
ctcatcgactcggctgaggcatttgatgctttagtagcctcccttgatactcgtggcatc
cgggagtcacatctgcattcaatgttgcaaagcattgaggcaacttttaaggatgctata
gggaggaaaaagtgtgctactatagaacagccagctggaaggattttgagaaatggaagt
agtgaactcataagcccaaattatagtaatgaatttggaagtccatgcagcaccctttca
ggtgtggtgtctgatcctgcgatggcatgctcgggttctttcaagatagagcttgggcgt
aatgatctggagaaggttgctatttcaaaaagggcatgcatctttctgaagtggatgtgg
agggagtgcaacaatcatcaatctatgcgtgccatgaaatatggaaagaaacggtgctcc
gagttgatacattgttgtgattattgttaccagatttatttaactgaagaaaagcattgt
tcttcttgccacaagacgctcaaatccattcacaatttctctgaacacacatcacagtgt
gaggaaaaacggagaacagatgctaattggaagatacaaatttcagatgattctgttccc
ataagactgagattgctgaagcttcttttagctacctttgaggcctcagttccagcagaa
gctctacaactattttggacggatggatatcgaaaatcatggggtgtaaagttgctttct
acatcatctatcgaggaagtcttccagatgctaactgtgctggaaggtgcactaagaagg
gattacttgtcatctaatttcgagacaacagctgagttgcttaaatcaaatattccagat
tttgctgatcagaattttattgcacgttctgaatctgtggatgtacttccatgggtaccc
gatactgctgctgctgtaacattacggttgttagaccttgattctgccctctcatacacg
cttgaacaaaaggcaggattaaataaagagcgtgaagctggggattttattaagtttcca
tcaagatataccgctgttaagaacaaacaagaagtggaactggttggagctactggtttt
gatcatcatgatggagcacggctgacttccagcaatggccgtggacgaggaggtcgaggg
cgtggcaggggaggaggccgagggcgtggcaggggaggtagatccctcagtcgtggtggc
aaactcccaagagattctagcaactctcccaaggttgagttcagggatgacaacgatgtg
tcttacaacaaagccccatataagcaagttggtcgagggagagggcgtgggcgtggccgt
ggtcgtggacgtggacggggacgaggacctcgtactgttaggcctaggcagccagctgag
cttggagcccgatcagttccaaaggcaaacttattggggtcctttggcatgctaagtact
tcaaagcctaccactgtgcattctccacagagctccggtgcagaagagtggggcttggag
agacgggcaaatgcggaggttgatgagaacaattctgtatctcaatctgatgaatcggaa
gggaatgaagaatatgatcagcccatgcatgaggactctgacgagcagcttccagattat
tcaagggacaattctgcatccagcccccttcagatgatggatgacgagtctgaagataat
ggtgaagacgatgaagataatggtgaagacgacgaagagggtgaggacggggttgactat
gatgcggaacaccctgttgacgaaggtaatgatgacactgagatgagtggggatgaggaa
ctggacgatgacgacgaggatgatgatgatggtggtggtcagggtggagtcggcaacata
aatgacgatgaagatggctcatcctattcttctgagtatagtgaataa
DBGET
integrated database retrieval system