Lacticaseibacillus rhamnosus GG: LGG_02629
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Entry
LGG_02629 CDS
T00987
Symbol
uvrA
Name
(GenBank) Excinuclease ABC, subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lrh
Lacticaseibacillus rhamnosus GG
Pathway
lrh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGG_02629 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrh03400
]
LGG_02629 (uvrA)
DNA repair and recombination proteins [BR:
lrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGG_02629 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LGG_02629 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
DnaJ_CXXCXGXG
nSTAND1
AAA_21
AAA_16
RsgA_GTPase
AAA_23
AAA_25
AAA_33
nSTAND3
Viral_helicase1
ATPase
Motif
Other DBs
NCBI-ProteinID:
CAR88524
UniProt:
A0A7S7FR26
LinkDB
All DBs
Position
2689108..2691636
Genome browser
AA seq
842 aa
AA seq
DB search
MAIPDHISVRGAYVNNLKHLNVDIPLNKLVAITGRSGSGKSSLAMGVLYAEGMRRYMSTL
STYTRRRLGQTSPAAADSVKHIPSAIALRQRPVVPGIRSTVGTATEALNVIRLMFSRLGS
PVCPNGHRVPPTLDIAKAMDLPNDGESGMGMITCPTCGVHFMAFAAEDFAFNSTGACPTC
GGTGQARTLAANRLIPDPTLTIRQGAVASWRLPGRNFMPYVAQAIGIDIDTPFQDLPEDQ
QEQVWHGQRKKYAINIPSKTGKIFHMDHAQYENAFNAVEDSLATTKNERAIERLNRFYEF
GVCPTCHGSRFAPKLLAQHLVDQNIAQVSDMTLTQLTAFIPKIYQWLPANMQALAHDIIK
ELTQLLKPIMDLGLSYLTLSRAAASLSTGELQRIQLSRTLRTETTGVLYVLDEPSIGLHA
ANVAGLLEVMHGLVDQGNSLVVVDHNTAIINAADQIIEIGPGAGADGGQILDQGSPAEIS
HDAKSLIAPFLTGKTPLIVRPQAGSAAIAKAKQLHLTVTNRFNLHHLNVQFPINCFSVVS
GFSGAGKSTLIFDALVPALSATKDQPAPTFVRDLKTGGIRHVVAIDATPVGKNVRSTVAT
YTDILDHLRHLFASLPAAKAKHYTSSHFSYNVKAGACPTCGGTGVINLDIQYLPDMQQTC
PTCHGRRYNPEVLKIKWHERSIADLLDLDVDTALTVFKDEPTIVHTLQTLHDMGLGYLHL
GESTPTLSGGEAQRLKLVAHMGRSQKDTLFVFDEPSVGLHPLDVQTLVAVFQRLLQTGAT
VIAIEHDLDVIANADYVLDLGPKGGAEGGHVMAAGTPQAIAKQGHGETAKYLAAHLAAFH
VD
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcaattccagatcatatcagtgttcggggcgcgtatgtgaataatttgaaacatctc
aacgtcgatattcccttaaataagcttgttgcgatcaccggccgatccggttccggtaaa
agctcactggcaatgggcgtgctgtacgcagaaggcatgcgccgctacatgagtacgctg
tccacttatactcgccgacgcttaggccaaaccagcccggctgcggcagattcggtcaaa
catattcccagtgccattgcgctcagacagcggcctgttgttccgggaattcgctcaaca
gtcggcaccgcaactgaagccctcaacgtcattcgcctcatgttttcgcgcctgggctca
cctgtttgtcccaatggtcaccgcgttccaccgacactcgatattgccaaagcgatggat
ctgcctaatgatggcgaaagcggcatggggatgatcacctgtcccacatgcggtgtccac
tttatggcatttgcggctgaagattttgcttttaactcaacgggtgcctgcccaacctgt
ggcggtacgggacaggcgcggacgcttgcggccaatcgcctcatccctgatccaactttg
accattcgccaaggcgccgtggcatcatggcggcttccgggacgcaacttcatgccttat
gtggctcaagcaatcggtattgatattgacacgccttttcaagacttacccgaagaccag
caagaacaggtctggcacggccaacgcaaaaagtatgcgatcaacattccaagcaaaacc
ggcaagattttccacatggatcacgcccaatatgaaaatgcttttaatgccgttgaagat
tcgctagccaccaccaaaaacgaacgggcaattgaacggttaaatcgtttctatgaattc
ggcgtttgtccgacctgccacggcagccgattcgcacccaaactgttagcccagcatctg
gtcgatcaaaacatcgcccaagtcagcgacatgacgctcacacaactaactgctttcatc
ccgaaaatttaccagtggctgccagctaacatgcaagccttggcgcacgatattatcaaa
gagctgacccaactgcttaaaccaatcatggatctaggcttaagttacctcacgctgagt
cgggccgctgcttcgctttcaaccggcgaattgcaacgcattcagcttagccgcaccttg
cgcaccgaaacaaccggcgttctttatgtccttgatgagccttccatcggtttgcacgct
gccaatgtcgccggtttattggaagtcatgcatggcttggtcgatcaaggcaattcgtta
gtcgtcgttgatcacaataccgccatcatcaatgccgccgatcaaatcatcgaaatcgga
cccggagccggagctgacggtggccagattcttgatcaaggcagtccggccgaaattagt
cacgatgctaagtcgttaatcgcaccgtttttaactggcaaaacgcctttaatcgtccgt
ccacaagccggcagtgcggccattgccaaagccaagcaactgcatctcacggtcacgaat
cggtttaatcttcatcatctgaacgtccaattcccgattaattgtttctcggtggtgtcc
ggattctccggtgcgggcaagtccaccttgattttcgatgcgctagtgccggcactttcc
gcaaccaaagatcagcctgctcccacgtttgtccgcgatctaaaaaccggtggcattcgg
catgtggtcgccattgacgcgacgccggttggcaaaaatgtccgctcaacggtcgccacc
tacaccgatattctggatcatttgcggcatcttttcgccagcttacctgctgctaaggcc
aagcactataccagcagccatttttcttacaatgtcaaagccggcgcctgcccaacctgt
ggcggcaccggggttatcaatctggacatccagtatttaccggacatgcaacaaacctgc
cccacctgccacggccgacgttacaatccagaagtgttgaaaatcaaatggcacgagcgg
agcattgcggatttactcgacctcgatgtggacacagcactcaccgtttttaaggacgaa
ccgaccatcgtccacaccttacaaaccttgcacgatatgggcctgggctatttgcatctt
ggcgaaagcacgccgacgttatccggtggtgaagcgcaacgcctcaaacttgttgcccac
atgggacgctcgcaaaaagacacgctttttgtcttcgatgaaccttcagtcggtctgcat
ccgctcgatgttcagacccttgtggcggtgttccagcgactgttacaaaccggcgccacc
gtcattgccattgagcacgacttagatgttattgccaacgctgattacgtcttggacctc
ggaccaaaaggcggtgcagaaggcggacacgtcatggcagccggcacgccgcaagccatt
gccaaacaaggtcatggagaaacggcaaaatatttagcggcacatcttgctgcttttcat
gtggattga
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