Lethenteron reissneri (Far Eastern brook lamprey): 133345709
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Entry
133345709 CDS
T09663
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
133345709
NCBI-ProteinID:
XP_061412672
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All DBs
Position
22:7427212..7478961
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AA seq
1479 aa
AA seq
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MADLERVLESLLNPSPVKTDHTIDLGYGSGEGDLSQLPQQKTVIKKMTYTSQSGGGLHGD
FPMGFQATGPQMHGGPSHTRDGDFSSTSLASLPPRSGGVGGSAHRKVSTSSSMERRLGPS
RVPAMPGTPLHSHNVPLHSLNVPLSPGAHSYQVGPSQTTAWGGGGGGGGGARPPGMTVIT
TTETLRARSPAAPRGRSPTRGPNGGTTMTSTTTVTSNSTTAERRFGSPGATAFDFSSDTS
SRPSSPEPARKNLETRGRSQSRESQIRQRLQSTSPSPRWTELDDVKRLVKGTRSASVSPT
RGRSVSRSAMGTLPIPRKPSLERKPSVEGRSGYRSDDETWVKIDNSVKPVVLPHYDVDLR
LRSAQDLSYFPPEPLRHVDPKLSAFALQATLPGGAPMMPAHSSTSRSIASYAVTTQQRQP
AQPPTYNTVDLNAFSEDYSAQKHSTFAERPKAASGSVNTRVENIAIKKQSSDTASGAATK
LYGEDESANSSDVKILTSSGHGARKEMYLSEEPPKKDVLVIQSSRDKSGTRTYVKDKATL
IDTQMDDEPWYASNRGGLGGSGKAGGGKGGGGGGGLCSPCCAGCPWWLWLLGLLLTWLLL
LGLLAGLLAQGSELSSVKSRVDQLERMMQGGVGQSSRYVAPAAGVNVGRAQPVGSLNPGV
DAGTWAATDAEISTRLRAMLEQQLASTEMRDRFRGPKGEAGEAGLRGAKGEAGDRGMPGI
PGSRGDQGQQGSPGTPGPMGIQGPPGLQGPQGFDGTVAQKGARGDVGPEGPPGQKGRDGI
PGTRGEPGAPGSGQKGDRGAPGEQGFPGLQGPPGVSGQKGSAGDKGSTGFDGLPGASGQR
GEPGQKGSKGDRGDNGSPGVKGDAGEAGLRGLAGEIGLRGPIGPAGPAGIKGDKGEPGTA
GRPGPQGEVGNPGSAGKRGADGQPGESGPKGPPGVAGLPGLAGEPGRPGVQGEPGLEVSS
TLIFSRHFAGEPGSPGSVISDGGNSQTITIPGPPGPPGSPGLPGTQGFPGPIGPPGSQGI
QGEKGEKGDRGFKGEMGEQGERGAAGRSAASSSVSYEQGPAGPPGPPGPPGQPGYSSDTS
ISRDGPMGPPGRPGPPGPPGESIVGPPGPPGLPGFSSSENWQQVQQQIPGPPGPPGPPGI
SREGPMGPPGNRGSPGPSGQMGLPGMPGSPGQTGEKGEAGVPGAPGFAGQGYRAEQGPPG
PPGPPGTPGPKGDTGAPGLGGHYAGVQGPPGPAGPPGDKGDVGYPGVPGAPGIPGRPGRD
ATNGAQPDEDISIMVGVGELEQQQSWSGSQREISSSSSSSSSSSGGSNGGGGRNSGGGGG
GGGGGSFSSGSSNRGSQQPSVQYIAGPPGPPGPPGPPGSGGGSSWSTDYQGYGGIQGPQG
PRGRPGVPGSPGVPGTIHNIVEIQEYLRSIRSINGVPGTPGEKGDQGEPGLSGPSGSRGE
QGFPGTPGPEGPPGSPGFDGQKGQKGEAGFSRRNRRAAA
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggcagatctggaaagagttttagaatcattgctgaatccaagcccagtcaagaccgac
cacaccatagacctgggctatggctccggtgaaggcgacttgtctcagctgccccagcag
aagaccgtcattaaaaagatgacttacaccagccagtcgggaggcggcctccacggcgat
tttccaatggggttccaggcgaccggaccccaaatgcacggcgggccgagccacacgcgc
gacggtgacttcagcagcaccagtctggcctcgctgcccccacggtccggcggcgtcggc
ggctccgcgcatcgcaaggtgtccacgtcgagcagcatggagcggcgcctggggccctcg
cgtgtgcccgccatgcccggcacgccgctccactcgcacaacgtgccgctccactcgctg
aacgtgccgctcagccccggcgcgcactcctaccaggtcggccccagccagaccacggcg
tggggaggaggaggaggaggtggaggaggcgcccgcccgcccggcatgacggtcatcacc
accacggagacgctgcgcgcgcgctcccctgccgccccccgcggccgctctcccaccagg
ggcccgaacggcggcaccaccatgaccagcaccaccaccgtcaccagcaactccacgaca
gcagagcgccgcttcggctcaccgggggccaccgcgttcgacttcagcagcgacacctcc
agtcgcccatcatctccagagccagctcgaaaaaatcttgagacgcgcgggcgcagccag
tctcgagagagccagatccgccaaaggctgcagagtacttcaccgtcacccagatggacc
gagctggacgacgttaagcgcctggtgaagggcacccgctcggccagcgtgagccccacg
cgcggccgctcggtctcccggagcgcgatggggacgctgcccatcccgcgcaagcccagc
ctggagcgcaagcccagcgtcgagggcaggagcggctaccgctcggacgacgagacctgg
gtcaagatcgacaacagcgtcaaaccagtggtgctgccccactacgacgtggacctccgc
ctgcgctccgctcaggacctctcctacttcccgcccgagccgctgcgccacgtcgacccc
aagctgtcggcgttcgccctgcaggcgacgctgcccggcggcgcgcccatgatgcccgcg
cactcgtccacgtcgcgctccatcgcctcctacgccgtgaccacacagcagcgccagccc
gcgcagccgcccacctacaacaccgtcgacctgaacgccttcagcgaggattactccgct
cagaagcacagcacgttcgccgagcggccgaaggcggccagcggatctgtaaatactcgc
gttgaaaacatcgccatcaagaaacagagttctgacactgcttccggtgccgcaactaaa
ctctacggcgaggatgaaagcgccaacagctccgacgtaaagattctgacttccagcggc
cacggagcaaggaaagagatgtatctgtctgaagagcctcccaagaaggacgtcttggtc
atccaatcttccagggacaaatctggcacccgcacgtatgtgaaggacaaagcgacactc
atcgacacccaaatggacgacgagccgtggtacgccagcaatcggggcgggctgggtggc
tcgggcaaggccggtggcggcaagggtggcggtggcggcggcggtctctgcagcccctgc
tgtgcgggttgcccctggtggctctggctcctggggctgctgctcacgtggctgctgctg
ctgggactcctggccggactcctcgcgcaggggagcgagctcagctccgtgaagtcgcgc
gtcgaccagctggagcgcatgatgcagggcggcgtgggccagagttcgcgctacgtggcg
cccgcagccggggtgaacgtcgggagggcgcagcccgtgggaagcctcaaccccggagtg
gacgccggtacttgggcggccacggatgcggagatcagcaccagactccgcgccatgctc
gagcagcagctggcgtcgacggagatgagagatcggttccgcggtccgaagggagaagcg
ggagaagccggcctgagaggcgctaaaggtgaagctggagaccggggcatgccaggaatc
cccgggagcaggggcgatcaaggtcagcaaggctcgccaggaactccaggccccatgggc
attcagggaccccctggacttcagggacctcaaggatttgacgggaccgtcgcacagaaa
ggagctcggggagacgttggaccagagggaccacctggccagaaaggccgtgacgggatt
cccggcactcgaggggagcccggagctccaggtagtggacagaagggcgaccgaggtgcg
cccggagagcaagggtttccaggtctccagggccctcccggtgtctccggacaaaaaggc
tctgccggagacaaaggctccacaggatttgacggtttgccaggagcgtccggccagaga
ggcgagcccggacaaaaaggatcaaagggtgacaggggtgataatggcagccctggtgtt
aaaggcgatgcaggtgaagcagggctgcgtggtttggcaggcgagatcggacttcgcggg
cccataggacctgcaggcccagcaggaataaaaggcgacaaaggcgaacctggaacggcg
ggtcgtcccggaccacaaggagaggttggcaacccgggcagtgctggaaagcgtggagct
gatggacagccaggggaatccggacccaaaggacctccaggagtggccggactgccaggc
ctcgcaggagaaccgggaaggcctggcgtgcaaggagagcctggattagaggtgtcctcg
accttaattttctctcgacacttcgcaggagaacctggcagccctggcagcgtcatcagt
gatggaggaaattctcagacgatcacgattcccgggcccccaggtccacccgggtcccca
ggtctgcccggcacgcaaggattcccaggtcccatcggtcctcctggcagccagggtatc
caaggtgagaagggcgagaagggcgaccgtggattcaaaggagaaatgggcgagcaagga
gagagaggcgcggcgggccgctctgcagcttccagttcagtttcgtacgagcagggaccg
gccgggcctcctgggcctcccggacctcccggacagccaggctactcctccgacaccagc
atttcacgcgacggcccaatgggtcctccgggcagaccagggccgccaggtcccccgggt
gagagcatcgtgggacctccaggccctccaggacttccaggattttcatcgagtgaaaac
tggcagcaggtgcagcagcagatcccaggtccccccggtccacccggcccaccaggaatt
tctcgcgaaggcccgatgggccctccaggcaaccgcggctcgccgggaccgtcaggacaa
atgggactaccaggaatgcctgggagtccaggccaaaccggagagaaaggagaagccggt
gtcccaggggctccaggatttgctggccaaggctacagagcagagcaagggcccccagga
ccccctgggcctccaggcacgccgggccccaagggagacacaggggcccccggcctgggc
ggacactacgctggcgtgcagggacccccaggccccgccgggcccccaggagacaaagga
gacgttggctatcccggggtacccggtgctccaggaattcctggccgccctggcagagac
gccactaacggcgctcagccggacgaggacatttccatcatggtcggtgtgggagagctc
gaacagcagcagagctggtcggggtctcagagagagatcagcagcagcagtagcagcagc
agcagcagcagcggcggcagcaatggaggcggtggcaggaacagcggcggtggtggcggc
ggcggcggtggcggcagcttctcgagtggttcctccaatcgtggctcacagcagccgtct
gtgcagtacatcgctgggccgcccggcccgcccggcccacccggcccaccgggctccggc
ggtggaagcagctggagtacagactaccagggctacgggggaattcaaggaccccaaggg
ccccgtgggcgtccaggggtgcctggctcccctggtgtgcctggcacgatccacaacatc
gtcgagatacaggagtacctgagatctatccggagcatcaatggggtgccgggaacacca
ggagagaaaggcgaccagggggagcctgggctgtcgggacccagtggatcgcgcggtgag
caaggattcccaggcacacccggaccagaagggccccccggttctcctggctttgacggt
cagaagggacagaaaggcgaggcaggattctcaagaagaaaccgcagggcagcggcatga
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