Lethenteron reissneri (Far Eastern brook lamprey): 133349297
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Entry
133349297 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133349297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133349297
03036 Chromosome and associated proteins [BR:
lrj03036
]
133349297
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133349297
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
133349297
Chromatin remodeling factors
BAF complex
133349297
PBAF complex
133349297
GBAF(ncBAF) complex
133349297
BRITE hierarchy
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
BRK
Bromodomain
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
133349297
NCBI-ProteinID:
XP_061418660
LinkDB
All DBs
Position
4:4211361..4268641
Genome browser
AA seq
1673 aa
AA seq
DB search
MPGNSGRRRKRWARPERGHGTRCGPCDQQPDTMSAPGDQAMGGTPHPGLSPGPGPSPGTM
MGPSPGTMLGHSPGQMVGPSPGGAMMGPSPGPIMGPSPGPGPSPGSMHGMMGPSPGPPPS
GHPMGMPGAAGYPQESMYPMHKSMESMQDKVMVDDPRYGPMRPMGMRPTMSSLPPPHSPM
DQHSQGYPSPHPSPMSGAEHASSPMQGGIAPPPAAGPSGTPDPTQGAVASKGTSPSFSPL
QLQQLRAQILAYKLLARGQPLPENLQLAVQGKRPPPGPQSSHQAPPPGPQNLPPQFSRPH
AMGISPMPGGAVQGPMSTGSSKPWSEGPSLSSVVSSSTPQRHPTAGRPSPAPPPSVPPTS
VPGGVPGTPQGQSAPHPQMTPQPLGPGPTPHGPMATPGHVGSSVPPFQLRQNLITPIAKP
QGLDPVEILQEREYRLQARIAHRIEELENLPGSLPGDLRNKATIEIKALRLLNFQRQLRQ
EVVACMRRDTTLETALNAKAYKRSKRQTLREARITEKLEKQQKIEQERKRKQKHQEYLNS
ILQHAKDFKEFHRTMTAKVQKVTRAVATYHANTEREQKKENERIEKERMRRLMAEDEEGY
RNLIDQKKDKRLAYLLMQTDEYIGNLTDLVREHKIQQAAREKKKKKKRKKKKQEENGENS
NSGMGPDGEPLDESSQMSDLPVKVIQTESGRILTGPEAPKASQLDTWLEMNPGYEVAPRS
DSEESSSEEDDTEYEDEDLPQPQVPPPGEETTKKGKQLPHPETEDVSEDDAKHIIEHARQ
DVDDEYRRQEVSGSQSYYTMAHAVSERVECQSSLLVNGSLKMYQVQGLEWLVSLYNNNLN
GILADEMGLGKTIQTIALITYLMEHKRLNGPFLIIVPLSTLSNWMLEFDKWGPSVVKISY
KGSPLARRAFMPQLRSGKFNVLLTTYEYIIKDKHVLAKLRWKYMIVDEGHRMKNHHCKLT
QVLNTHYIAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFALTGEKV
DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVVKCDMSALQKVLYRHMQAK
GVLLTDGSEKDKKGKGGAKTLMNTIVQLRKIANHPYMFQHIEESFAEHLGFPNSIVQGAD
LFRASGKFELLDRILPKLRVSNHRVLLFCQMTSLMTIMEDYFAFRSFRYLRLDGTTKSED
RSNLLKTFNEPNSPYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIG
QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGHERRAFLQAVLEHE
EQNEEEDEVPDDETVNQMIARSEEEFEMFMRMDLDRRREDARNPRRRPRLMEEDELPNWI
IKDDAEVERLTCEDEEEKLFGRGSRQRKEVDYSDSLTEKQWLKAIEEGNLDLLEEEVRMK
KARKRKRDPDTPGPSRERVGAAPEPEEKAKKKRGRPPVEKPVPNPPALTRKMKRIIDTVI
KYRDSCGRQLSDVFIQLPSRKELPEYYELIRRPVDFNKIKERIRIHKYRSMDDLEKDVML
LCHNAQTFNLEGSLIYEDSKVLQGVFRSEREKEEESEEESDSGEEDEGDSDNESHSVKVK
IRLGRRDRGRDKGKARKRPSRPAKVKPVISDEESNESQDNQERSEGSGDTEED
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcaacagcggccgccggcgcaagcgatgggcgcggcctgaacgagggcacggc
acgcgctgcggcccctgtgaccaacagccagacacaatgtcggcacctggagatcaggcc
atgggtggcaccccccacccaggcctctctccagggcccggcccgtcccccggcaccatg
atgggtcccagccctggcaccatgctgggccacagccctggccagatggtggggcctagt
cctggtggggccatgatggggccttcaccgggacccataatggggcccagcccaggacct
ggaccctcacctggctccatgcacggaatgatgggcccaagccccggaccaccacccagt
gggcaccccatgggcatgccaggcgctgcgggctacccacaggagagcatgtaccccatg
cacaagtcaatggaatccatgcaggacaaagtcatggtggacgatccgcgctacggaccg
atgcgcccgatgggcatgaggccaacgatgtcgagcctgcctccaccgcacagccccatg
gatcagcattcccagggttacccgtcgccacacccgtctccgatgagcggtgccgagcac
gcctccagccccatgcaaggcggcatcgcacctccgccagccgctggtccgtctgggacg
cccgacccaacacagggcgccgtcgcaagcaagggcacctcgccctccttcagccccctc
caactgcagcagctgcgtgctcagatcctggcttacaagctgcttgcccggggccaaccc
ttgcccgagaacctgcagctggctgtccagggcaagcggccgccgccgggaccacagtcg
tcccaccaggcgcccccgcccggtccccagaacctcccgccgcagttcagccgtccacat
gcaatgggtatttccccaatgcctggaggtgcagtacaagggcctatgtccactggcagt
agcaagccgtggtctgaaggtccctcgctgagttcggtggtgtcgagcagcacgccccaa
cgccacccgacagccggccgaccctctcctgccccaccaccctccgtgcccccgacatcc
gtgccgggcggagtgccgggtaccccgcaggggcagtcggccccccacccacagatgacg
ccgcagcctttagggcccggtccaacgccacacggaccgatggccacaccgggccatgtt
gggtcgagcgtgccgcctttccagttacgccagaacctcatcacgccaatcgccaagcca
cagggcctcgaccctgtagaaatcctgcaggagagggagtacaggctacaggctcgcatc
gcccaccgcattgaggagctagagaacctgcctggatcactgccgggcgacctgcgcaac
aaggccaccatcgagatcaaggcgctgcgcctcctcaacttccaacgccagctacggcag
gaggttgttgcctgcatgcggcgcgacacgacgctcgagacggcgctcaacgccaaggcg
tacaagcgcagcaagcggcagacgctgcgcgaggcgcgcatcaccgagaagttggagaag
cagcagaagatcgagcaggagcgcaagcgcaagcagaagcaccaggagtacctgaatagc
atcctgcagcatgccaaggacttcaaggagttccaccggacgatgacggccaaggtgcag
aaagtgactcgcgccgtggccacgtaccacgccaacacagagcgcgagcagaagaaagag
aatgagcgcatcgagaaggagcgcatgcggcgcctcatggcagaagatgaggaaggctac
aggaatcttatcgaccagaagaaggacaagcgtctggcctacctgctcatgcagacggac
gagtacattggtaatctcacggacctggtgcgcgagcacaagattcagcaggccgcccgt
gaaaagaagaaaaagaagaaaaggaagaagaagaagcaggaggagaatggcgagaattct
aattcagggatgggtccggatggagagccactggatgagagcagtcagatgagcgacctt
ccggtcaaggtcatccagacggaatcgggccgcatcctcacaggcccggaggcccctaaa
gccagccagctggacacctggcttgagatgaaccctgggtatgaagttgccccgaggtcg
gatagcgaagagagtagctctgaagaggatgacacggaatatgaggatgaagatctgcct
cagccgcaggtgcctcctcccggcgaggagaccacgaagaagggaaagcagttgccacac
cccgagactgaggacgtctctgaggacgacgcaaagcacatcatcgagcacgcccgacag
gatgtagatgatgagtaccgcaggcaggaggtgagcggatcgcagtcctactacaccatg
gcccacgctgtctccgagagggtggagtgccagtcgtccctgcttgtcaacggctcgctc
aagatgtaccaggtacaaggcctcgagtggctggtgtcgctctacaacaacaacctcaac
ggcatcctggctgacgagatggggctcggcaagactatccagaccatagccctcatcacc
tacctcatggagcacaagcgactcaatgggcccttcctcatcatcgtacccctctcgacc
ttgtcaaactggatgctggaatttgacaaatggggcccatccgtggtgaagatatcttac
aagggttctcctcttgcgcggcgagcattcatgccacagcttcgcagcggaaagttcaac
gtgctgctcaccacgtacgagtacatcatcaaggacaagcacgtgctggccaagctccgc
tggaagtacatgattgtggacgaaggacacagaatgaagaaccaccactgcaagctgacc
caggtgctgaacacgcactacatcgcgccacgacgccttctgctcacggggacgccgctg
cagaacaagctgcccgagctgtgggccctgctcaacttcctgctgcccaccatcttcaag
agctgcagcacctttgagcagtggttcaacgccccctttgccttgacgggagaaaaggtg
gacctcaacgaggaggagacaatcctcattattcgccgtctgcacaaggtgctgcgcccc
ttcctcctgcgccgcctcaagaaagaggtcgagtcccagctgcccgaaaaggtggagtac
gtggtcaagtgcgacatgtcagcgctgcagaaggtgctgtaccgacacatgcaggccaag
ggcgtgctgctcaccgatggctcagagaaggacaagaagggcaagggtggtgccaagact
ctgatgaacaccatcgtacagctgaggaagattgcaaaccatccttacatgttccagcac
atcgaggagtcgtttgcggaacatcttggcttccccaacagcatcgtgcaaggggctgac
ctattccgcgcatctgggaagttcgagctactggaccgcatcctgcccaagctgagagtc
agcaaccaccgagtgctgctcttctgtcagatgacctccctcatgaccatcatggaggac
tactttgccttccgtagctttcgctacctgcgccttgacggcaccacgaagtcggaagat
cgcagcaacttgctgaagacgttcaacgagcccaactctccctacttcatcttcctgttg
agcacgcgtgccggagggctgggtctcaacctgcaggccgcagacactgtcatcatattc
gactccgactggaacccccatcaggatctgcaagcgcaggaccgcgcccaccgcatcggg
cagcagaacgaggtgcgcgtgctacgcctctgcaccgtcaacagcgtggaggagaagatc
ctggcggccgccaagtacaagctcaacgtggaccagaaggtcattcaggccggcatgttc
gaccagaagtcgtccggccacgagcggagggcgttcttgcaggcggtgctggaacacgag
gagcagaatgaggaggaggatgaggttccggacgatgagacggtcaatcagatgatcgcc
cggagtgaggaggagttcgagatgttcatgcgcatggacctggaccggcggcgagaggac
gcacgcaacccccggcgccggccgcgtctcatggaggaggatgagctgcccaactggatc
atcaaggacgacgcggaggtggaacggctgacctgcgaggacgaggaagagaagctgttc
ggccggggttcccggcagcgcaaggaggtcgattatagcgactcgctcaccgagaagcag
tggctcaaggcgattgaggagggcaacttggacctgctggaggaggaagtgcgcatgaag
aaggcgcgcaagcggaagcgcgatcccgacacgccggggccgagccgcgagcgtgtgggg
gcggcccccgagccggaggagaaggcgaagaagaagcgtggccgcccccccgtggagaag
cccgtgcccaacccgcccgccctcacacgcaagatgaagcggatcatcgacaccgtcatc
aagtaccgtgacagctgtggccgacagctgagcgacgtgttcatccagctgccatcacgg
aaggagcttccggagtactacgagctgatccgccgccctgtggacttcaacaagatcaag
gagcggatccgaatccacaagtaccgaagcatggacgacctggagaaagatgtgatgctg
ctttgtcacaatgcacagactttcaacctggagggttccctgatctacgaggactccaag
gtcctgcagggagtgttccgaagcgagcgcgagaaggaagaggagagcgaggaggagagc
gacagcggcgaggaggacgagggtgactccgacaatgaaagtcacagcgtgaaggtgaag
atacggctgggacggcgggaccgcgggcgcgacaagggcaaagcgcgcaagcggccgagc
cgccccgccaaggtcaagcccgtgatcagcgacgaggagtccaacgagtctcaggacaac
caggaacgttcggagggaagcggtgacaccgaggaggattga
DBGET
integrated database retrieval system
