Lethenteron reissneri (Far Eastern brook lamprey): 133357171
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Entry
133357171 CDS
T09663
Name
(RefSeq) transcription factor SOX-2-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133357171
Transcription factors [BR:
lrj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133357171
BRITE hierarchy
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
DUF4799
Motif
Other DBs
NCBI-GeneID:
133357171
NCBI-ProteinID:
XP_061430973
LinkDB
All DBs
Position
57:complement(440951..445360)
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AA seq
448 aa
AA seq
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MYSMLEAELKPVGGGAQPKALSGGPGGAGGVLGAGGDGKVPDDRVKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKT
KTLLKKDKFSLQGGLLASGGPPGSAAAAAAAAGLGQRLDPYPQLNGCWANGSAYTAAGLQ
QEPLAHAYSQHAALSAAHGAAQLQGLHRYDMSGLQYLPGGQGYLNGAAAAGYSVSYAPQP
SRALSPPPSHAASSFGHHHQQQHQQQQQQQQRTLSPVGGIYVQQPGRTLSPGSGYAQQVR
EMSSPGIGYQAQQQQHSHQPQALPPLSSLTSVGKSEAATPSPPAVSAPGGGGGGGGGGGG
GGSGRAACPGDLREMISMYLPMGSSEAGVSEVAQSRLHHHLSQHYQNAGPNGTIPLTHID
TTLFHRGLGSRSRGGARGREEEEEEDYI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggaggccgagctcaagcccgtcggggggggggcacagcccaaggcg
ctgtcggggggtcctggcggcgccggcggggtcctcggcgcgggcggcgacgggaaggtt
cccgacgaccgcgtcaagaggcccatgaacgccttcatggtgtggtcgcgcgggcagcgg
aggaagatggcccaggagaaccccaagatgcacaactcggagatctccaagcgcctcggc
gccgagtggaagctcctgaccgaggccgagaagaggcccttcatcgacgaggcgaagcgg
ctgcgcgcgctgcacatgaaagagcacccggactacaagtaccggccgcgccgcaagacc
aagacgctgctcaagaaggataagttctctctgcagggcggcctcctggcctcggggggg
cccccgggcagcgcggccgccgcggccgcggccgccggcctcggccagcggctggatccc
tacccgcagctcaacggctgctgggccaacggcagcgcctacacggccgcgggcctccag
caggagccgctggcccacgcctactcgcagcacgccgcgctgagcgccgcgcacggcgcc
gcgcagctgcagggcctgcaccgctacgacatgagcggcctgcagtacctgcccggcgga
cagggctacctgaacggggccgcggcggccggctacagcgtctcgtacgcgccgcagccc
agcagagcgctctcgccgcctccttctcacgctgcttcgagcttcggtcaccatcatcag
cagcagcaccagcagcagcaacagcagcagcagcgcactttgtctcccgtcggcggaatt
tacgtacagcagcccgggcgcacgctgtctccgggctccggctacgcgcaacaggtgcgg
gagatgtcgtctcctgggatcggatatcaagcgcagcagcagcagcactcgcaccagccc
caggcgctacctccactctcttcgctcacgagcgtcgggaagagcgaggcggccacgccg
tccccgccggccgtatccgcgcccggcggaggcggcggcggcggtggaggaggaggagga
ggcgggagtggacgcgcggcgtgcccgggcgacctgcgcgagatgatcagtatgtacctg
cccatgggcagcagcgaggctggcgtgtccgaggtggcccagagcaggctgcaccaccac
ctgagtcagcactaccagaacgccggccccaacggaaccatacccctcacgcacatagac
actactctctttcaccgtggccttggctcgcgatcacgcggaggagcgcgagggagggag
gaggaggaggaggaggattacatttga
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