Lethenteron reissneri (Far Eastern brook lamprey): 133357890
Help
Entry
133357890 CDS
T09663
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133357890
04121 Ubiquitin system [BR:
lrj04121
]
133357890
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133357890
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133357890
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133357890
BRITE hierarchy
Motif
Pfam:
NHL
DUF5128
Filamin
zf-B_box
SGL
Motif
Other DBs
NCBI-GeneID:
133357890
NCBI-ProteinID:
XP_061432032
LinkDB
All DBs
Position
60:complement(6376369..6396052)
Genome browser
AA seq
891 aa
AA seq
DB search
MADFAEAFRTRSLISSLIIGSGSSSGSSSSRRIVGPPPVPSSGGNQVVAMPCFPISANNN
SSSSSNAVASASTTTTAASASAAAAAASSSAATASSSAVTPGDLGLGHGAVDFPDDAELA
SDHDDEDDEDDELPNFLITTILDVMSSAEDDIQCSPRQHDHHHHQQHHQQQHHHQQGVVG
VGRDASWVVVEEPPPPPAPRCSSCESGARAASECLVCRELLCSACVSAHRRVKLTKDHRM
QPVQQQQQHQQQLQQQHQQQEVMMMVPVRDGEQTYCRQHEREVARLFCDTCAVPICRGCT
LAWHAGHSFVYLQDALQGSRGAALQLLAEARQERLTLQISIERVQAMVKRVDARMENIRS
EVRAVAERHKKALEEREGELLYKVEKVHVAKLGVLDRQAEELRQSLARLDGTLLCVQRSL
EQGRELDALKARELVLARVRELQDMKRAGALAPREDDRVIFTPPDGALCAALRALGSVSS
GACALLSTAVGEGLQRAVRGRVATFAVALQDHGGDPCCGGGETLAVAVTAPDGSPCWTEV
VELQDGTFRVRYRSDQDKEHRVSVTVAAASSSSATATPGGAGPVPRRHLPGSPFTVPLRA
GRSYAGVGIPLRCFGGEGDADGRLCRPWGVSVDREGRFVVADRSNNRVQVFGPAGQFLFR
FGAPGARPGQFDRPAGVACDDRRDRIVVADKDNHRVQVFSSRGRFLLAIGERGHLNGQFC
YPWDVAVSPESAGGGLILVSDTRNHRVQLFSPDGTFVNKYGLEGGLWRHFDSPRGVAFMP
DGHLLVTDFNNQRLLVVRPDCGSARFLGSEGSAPGQFLRPQGVAVDAEGRVIVADSRNHR
VQIFEPDGSFLCQFGGPGSGLGQMDRPSGIAVTPDGLIAVVDFGNNRVLVF
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggctgacttcgcagaagccttccgcactcgaagcctcatcagcagtctcatcatcggc
agcggcagcagcagcggcagcagcagcagcaggagaatcgtcggtccaccgcccgtgcca
tcttccggagggaaccaagtcgtcgcgatgccttgcttcccaatcagcgccaacaacaac
agcagcagcagcagcaatgccgttgcgtctgcctcgaccaccaccaccgcagcatcagca
tcagcagctgcggctgctgcttcttcatctgcggccacagcctcctcctccgccgtcacc
ccgggcgatctcggcctgggccacggggccgtggacttcccagacgatgcggagcttgca
agcgaccacgacgacgaagacgacgaagacgacgagcttcccaatttcctcatcaccacc
atcctggacgtgatgtcctccgccgaggacgacattcaatgcagtcctcggcagcacgat
catcatcatcatcagcagcatcatcagcagcagcatcatcatcagcagggtgttgttggt
gttggtcgtgatgcgtcgtgggtcgttgtcgaagagcctcctcctcctcctgccccccgc
tgcagttcgtgtgagtcgggagcgagagccgcctccgagtgcctcgtgtgccgcgagttg
ctgtgcagcgcctgcgtgtccgcacaccggcgggtcaagctcaccaaggatcaccgcatg
cagccagtgcagcagcagcagcagcatcagcagcagttgcagcagcagcatcagcagcag
gaggtgatgatgatggtgccggttcgagacggggagcagacgtactgccgacagcacgaa
agagaggtggcgcgccttttctgcgacacgtgcgccgtgcccatctgccgtggctgcacg
ctggcgtggcacgccggccacagcttcgtgtacctgcaggacgcgctgcagggatcgcgc
ggcgccgccttgcagctgctggcagaggctcgtcaggagcgcctcactctgcagatcagc
atcgagcgggtgcaggcgatggtgaagagggtggacgccaggatggagaacatccgctcg
gaggtgcgggccgtggccgagcggcacaagaaagcgctggaggaacgcgaaggggaactc
ctctacaaggtggagaaggtccacgtggccaagctcggcgtgctggaccggcaggccgag
gagctgcggcagagcctggctcgcctggacggcacgctgctctgcgtgcagcgctcgctg
gagcagggccgcgagctggacgcgctgaaggcgcgcgagctggtgctggcgcgcgtccgc
gagctgcaggacatgaagcgcgccggggcgctggcgccgcgcgaggacgaccgcgtcatc
ttcacgccacccgacggggcgctgtgcgcggccctacgtgctctgggcagcgtgagcagc
ggggcgtgcgcgctgctctccacggcggtgggcgaggggctgcagcgagccgtgcggggc
cgcgtcgccaccttcgccgtggcgctgcaggatcacggcggggacccctgctgcggggga
ggggagaccctcgccgtcgccgtcaccgcgcccgacgggagcccctgctggaccgaggtg
gtggagctgcaggacggcacgttccgtgtgcgctaccgctcagaccaggacaaggagcac
cgcgtgagcgtcaccgtggccgccgcctcctcctcctcggccaccgcgacccccggcggc
gccggccccgtgccccgccgccaccttcccggctcccccttcaccgtgccgctgcgcgcg
ggccgcagctacgccggcgtcggcatccccctccgctgcttcggcggcgagggcgacgcg
gacgggcggctgtgccggccctggggcgtgagcgtggaccgcgagggccgcttcgtcgtc
gccgaccgcagcaacaatcgcgtgcaggtgttcggccccgccgggcagttcctcttccgc
ttcggcgcgcccggggcgcgtcccggccagttcgaccgccccgccggcgtggcctgcgac
gaccgccgcgaccgcatcgtcgtcgccgacaaggacaaccatcgggtgcaggtgttcagc
tcgcgcggccgcttcctgctggcgatcggcgagcgcggccacctgaacggccagttctgc
tacccgtgggatgtcgcggtgagccccgagtcggccggcggcggcctcatcctcgtgtcg
gacacgcgcaaccaccgggtgcagctcttctctcccgacggcaccttcgtcaacaagtac
ggcctggagggcggcctgtggcggcacttcgactcgccgcgcggcgtcgccttcatgccc
gacggccacctcctcgtcaccgacttcaacaaccagcggctgctcgtggtgcggcccgac
tgcggctcggcgcgtttcctcggctcggaaggctcggcccccggccagttcctgcggccg
cagggcgtggccgtggacgccgagggccgcgtgatcgtggccgactcgcgcaaccaccgc
gtgcagatcttcgagccggacggcagcttcctgtgccagttcggcgggcccggcagcggc
ctcggccagatggaccggccgtcgggcatcgcggtcacgcccgacggtctcatcgccgtc
gtcgacttcgggaacaaccgcgtgctggtgttctag
DBGET
integrated database retrieval system
