Lacticaseibacillus rhamnosus Lc 705: LC705_01337
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Entry
LC705_01337 CDS
T00990
Symbol
pdhD
Name
(GenBank) Pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
lrl
Lacticaseibacillus rhamnosus Lc 705
Pathway
lrl00010
Glycolysis / Gluconeogenesis
lrl00020
Citrate cycle (TCA cycle)
lrl00260
Glycine, serine and threonine metabolism
lrl00280
Valine, leucine and isoleucine degradation
lrl00310
Lysine degradation
lrl00380
Tryptophan metabolism
lrl00620
Pyruvate metabolism
lrl00630
Glyoxylate and dicarboxylate metabolism
lrl00640
Propanoate metabolism
lrl00785
Lipoic acid metabolism
lrl01100
Metabolic pathways
lrl01110
Biosynthesis of secondary metabolites
lrl01120
Microbial metabolism in diverse environments
lrl01200
Carbon metabolism
lrl01210
2-Oxocarboxylic acid metabolism
lrl01240
Biosynthesis of cofactors
Module
lrl_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
lrl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LC705_01337 (pdhD)
00020 Citrate cycle (TCA cycle)
LC705_01337 (pdhD)
00620 Pyruvate metabolism
LC705_01337 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
LC705_01337 (pdhD)
00640 Propanoate metabolism
LC705_01337 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LC705_01337 (pdhD)
00280 Valine, leucine and isoleucine degradation
LC705_01337 (pdhD)
00310 Lysine degradation
LC705_01337 (pdhD)
00380 Tryptophan metabolism
LC705_01337 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LC705_01337 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrl04147
]
LC705_01337 (pdhD)
Enzymes [BR:
lrl01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LC705_01337 (pdhD)
Exosome [BR:
lrl04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LC705_01337 (pdhD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
GIDA
HI0933_like
FAD_binding_2
DAO
AlaDh_PNT_C
NAD_binding_7
NAD_binding_8
FAD_binding_3
3HCDH_N
DFP
TrkA_N
UDPG_MGDP_dh_N
Thi4
Motif
Other DBs
NCBI-ProteinID:
CAR90176
LinkDB
All DBs
Position
1327985..1329388
Genome browser
AA seq
467 aa
AA seq
DB search
MVVGDFAIDLDTVVIGSGPGGYVAAIRAAEMGQKVTVIENTFIGGVCLNVGCIPSKALIN
AGHRYQDALEASTFGINAKGADLDFKKTQDWKQNKVVHTLTSGVAMLLKKHKIETIMGTA
FLKDDHSLRVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFGKRILDSTGGLNLPEVPKEF
VVIGGGYIGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAM
AKEAEDTGNGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGIETTDRGLIKVD
AQGRTNKPNIYAIGDIVPGAALAHKASYEGKIAAEAISGKASAVDYKAMPAVCFTDPELA
TTGMTLAEAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTDENGTVIGGQVAGAGAS
DLISELTVAVEGGLNAEDLALTIHPHPTLSETIMDDAEVALGLPINI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggttgtaggcgattttgcaatcgatttggacaccgttgtgattggctctggcccaggt
ggttacgtagctgcgatccgagcagccgaaatgggtcaaaaggtaactgttatcgagaat
accttcattggcggggtttgtttgaatgttggctgtattccatcaaaagctttgatcaat
gccggtcaccgttatcaagatgccttggaagcaagcacgtttggtattaatgccaagggt
gcggatcttgatttcaaaaaaacccaggattggaagcaaaacaaggttgtacacacgtta
accagcggtgttgcgatgcttttaaaaaagcacaaaatcgaaaccattatggggacggct
ttcttgaaagatgatcatagtctgcgggttatgcaaaaagactcggctcagacatacacc
ttcaagaatttgatcattgcaaccggaagccggccaattgaaatcaaaggcttcaaattt
ggcaaacggattttggattcaaccggtggcctaaacttaccggaagtaccaaaagaattc
gtggtgattggcggtggctacatcggatccgaactggcgagcgcctatgctaacctaggc
gcacatgtcacaattcttgaaggcaccagctcaattttgccaaactttgaaaaggatatg
gttcaactcgtcttgaactcctttaaaaagcgcggcgttacagtgattaccaacgcgatg
gcgaaggaagccgaagataccggcaatggcgtcaaggtaacctatacagcggacggtaaa
gaacaaaccattgccgcagattatgtgatggtcacagtcgggcggcggccaaataccgat
gatttgggcttagacattgttggcattgaaacaacggatcgcggcttgatcaaagtcgat
gcgcaaggacgaaccaataagcctaatatttatgcaatcggtgacattgttcctggtgct
gcattagcgcataaagcaagttatgaaggtaagatagcggcagaggcgatcagtggcaag
gcaagcgcggttgactataaagcaatgccggcggtttgtttcacggatccggaactggcc
acaaccggcatgacgcttgctgaggcaaaggataaaggcatcaaagctaaagcaagcaag
tttccatttgcggcgaatggccgtgctttaagtttggcgcaaaccgagggcttcgttcgt
ctggttacggatgaaaacggaaccgtcatcggtggtcaagttgctggcgccggtgccagt
gatttgatctcagaattgacggtcgccgttgaaggtggactcaacgctgaagatttggcg
ttgaccatccatccacatccgaccttaagtgaaaccattatggatgatgctgaagttgca
ttagggttgccaattaatatctag
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