Ligilactobacillus ruminis: LRC_15250
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Entry
LRC_15250 CDS
T01626
Symbol
amyA
Name
(GenBank) Alpha-amylase
KO
K01208
cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:
3.2.1.54
3.2.1.133
3.2.1.135
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm00500
Starch and sucrose metabolism
lrm01100
Metabolic pathways
lrm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
LRC_15250 (amyA)
Enzymes [BR:
lrm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.54 cyclomaltodextrinase
LRC_15250 (amyA)
3.2.1.133 glucan 1,4-alpha-maltohydrolase
LRC_15250 (amyA)
3.2.1.135 neopullulanase
LRC_15250 (amyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Filamin
hDGE_amylase
DUF5696
Motif
Other DBs
NCBI-ProteinID:
AEN78773
UniProt:
G2SR36
LinkDB
All DBs
Position
complement(1573573..1575372)
Genome browser
AA seq
599 aa
AA seq
DB search
MANIRFNPWRKEYKRPFGAIKAGQAAEFMIEVYDAYVKSVELEIYRDGESTPCILQMEDQ
HDGRYCCTYTAGSAGLLFYYFKLVLYENNSEQTYYYCLGLGVTQNEGELSEHSYQLTVYE
HGVEAPDWYQDAVCYQIFPDRFANGNPDGRIDGRKQNSFIYGTDSDLPMYIRNKDGGIDR
WDFYGGNIRGIIEKIPYLKELGITMIYLNPVFEATSNHRYDTNDYMKIDPMLGTEDDFAE
LLQKLHANGIHVILDGVFNHVGKNSRYFNAGGLYGDDEGAFRNKESKYYSWFRFIHYPDS
YDSWWGVSDLPTVDKENPDYQQFIYGKKDSVISKWTSFGVDGWRLDVADELTDDFIENIR
KTLDDYKKRVLIGEVWEDASNKVAYSKRRRYVYGNGLYGVMNYPLRKCIIDLVLSSRSPL
EIAHELMQLRENYPRDFFFNSLNNLDTHDTKRIITACSGKMQLVRTAWELLFMFPGIPCV
YYGDEAGLVGDSDPDNRRFFPWGHENQEMLQFMKCLISKRRASQVLSRGELSLFVSGTFF
GIGRFLGDEAVAYLVNASDCEAEFNPDQLQSFHDEAGLGAKLCQAFANKKFGAWESVEI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccaatatccgctttaatccttggagaaaagagtacaagcgaccctttggcgcaatc
aaagcaggtcaggcagcagaattcatgattgaagtctatgacgcttacgttaaaagcgtt
gagctggaaatttatcgcgacggcgaatcaacgccctgcattttacagatggaagatcag
catgacggacgctattgctgcacgtatacggcaggctctgccggacttttgttttattac
ttcaagctcgttttgtacgaaaataattctgagcagacctattattactgtttgggactt
ggcgtcacgcagaatgagggcgaactttccgagcattcctaccagttgacggtgtatgag
cacggggtcgaagcccccgattggtatcaggatgcggtttgctaccagatttttccggat
cggttcgcaaacgggaatcccgatggcagaatcgatggtcgcaagcagaacagtttcatt
tacgggacggattcggatctgccgatgtacatcagaaacaaggacggcggcattgatcgc
tgggatttttacggcggcaacattcgtggcatcatcgaaaagattccttatttaaaggag
cttggcatcacgatgatctacctgaatcccgtttttgaggcgaccagcaaccatcgatac
gataccaacgattacatgaaaatcgatccgatgctcggaacagaagatgattttgcagag
cttttgcaaaagctgcatgcaaacgggattcacgtgattttggacggcgtgttcaatcac
gtcggcaaaaacagccgctatttcaatgcaggcggactttacggcgatgacgaaggcgct
tttcgcaacaaggaaagcaagtattattcgtggtttcgcttcattcactatcccgattcc
tatgattcgtggtggggcgtgtccgacttgccgaccgttgataaggaaaatccggactat
cagcagtttatctacggcaaaaaagacagcgtcatcagcaagtggacgagctttggcgtt
gacggctggcggcttgacgttgcggacgaattgacggatgactttattgaaaacatccgc
aaaactttggatgattataagaagcgcgtcttgatcggcgaagtctgggaggatgcttca
aacaaggttgcctactccaagcggcgccgctacgtttatggcaacggtctttacggcgtc
atgaactatccgctgagaaagtgcatcattgatctggtgttaagctctagatctccgctt
gaaattgcgcacgaactgatgcagcttcgcgaaaactatccgcgagatttcttcttcaat
tcgctgaacaatttggatacgcatgacaccaagcgcatcattacggcgtgttcgggaaag
atgcagcttgtcagaactgcatgggagctattgttcatgttccctgggattccttgcgtt
tactacggggatgaagctggtcttgtcggtgattccgatccggacaaccgccgtttcttc
ccatgggggcacgagaatcaagagatgctgcaattcatgaaatgcttaatttcaaagcgc
cgggcgtcgcaggtgctgagtcgcggtgagctatccttgttcgttagcggaacgtttttt
ggcatcggtcgctttttgggcgatgaagcagtcgcatatctggtcaatgcgtccgattgc
gaagcagaatttaacccggatcaattgcaaagtttccatgacgaggcggggcttggtgcc
aagctgtgtcaggcttttgccaataagaagtttggtgcttgggaaagcgtcgaaatctga
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