KEGG   Labeo rohita (rohu): 127156025
Entry
127156025         CDS       T09007                                 
Symbol
wdr48a
Name
(RefSeq) WD repeat-containing protein 48a isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    127156025 (wdr48a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127156025 (wdr48a)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     127156025 (wdr48a)
SSDB
Motif
Pfam: DUF3337 WD40 NBCH_WD40 ANAPC4_WD40 WDR54 RAWUL WD40_like Nucleoporin_N Tfb2_C
Other DBs
NCBI-GeneID: 127156025
NCBI-ProteinID: XP_050954660
LinkDB
Position
24:1414358..1428936
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPHSAIWVSTTKSTVNKWSLKGIHNFRASGDYDNDCSAPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKMEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFTSPDGSDPKLNLGGLLLQALLEYWPRTHIN
PMDEETELNHGSVNGEHESRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETES
MLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEH
VYEKIINLDSESQTGGSAAEKPSEQKEEEDMAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgacgcatcacagacagaatgcagcggggcgcaggaaagtgcaggtgtcatatgtg
atcagagacgaggtggagaaatataatcgtaatggagtcaacgcactacagctggatcca
gctcttaaccggctcttcaccgccggacgagactccatcatcaggatatggagcgtcaac
cagcacaagcaggatccgtacattgcatcaatggagcatcacacggactgggtcaatgac
atcgtcctctgctgcaacggcaaaaccttgatatcagcgtcgtcagacaccacggtgaag
gtctggaacgcacacaagggcttctgcatgtcaacactgcgaacacacaaggactatgtt
aaagcgttggcatatgctaaagacaaagagctggtggcttcagcaggactggacagacag
atcttcctctgggatgtgaacacactgactgcactgaccgcatccaataacaccgttact
acatcttctctcagtgggaacaaggactccatctacagtctggccatgaatcagatgggg
acggttatagtgtcaggatctaccgaaaaggttctgagagtgtgggacccgcgtacctgt
gccaaactaatgaagctgaaaggacacacagacaacgtcaaatcactgctgctaaacaga
gacgggactcagtgtctttcaggaagttcagacgggacgatccggctctggtctctgggt
cagcagaggtgtatcgccacgtaccgcgttcacgacgagggcgtctgggcgctgcaggtc
aacgaggcttttacgcacgtttattccggcggccgcgaccggaaaatatactgtacggac
ctacgcaatccagatatccgtgtgctgatctgcgaggagaaggcgcccgtgttgaagatg
gagctggacaggtcagctgatccgcattcggccatctgggtttccaccacaaagtccacg
gttaataagtggtctctgaagggtatccataatttccgagcgtctggtgattatgacaac
gactgcagcgctccactgacgccgctgtgcacgcagcccgaacaggttatcaaaggtggc
gccagcataattcagtgccacattctgaatgacaaacgacacattttgaccaaagacacc
aacaataatgtggcatactgggacgtgctgaaggcctgtaaagttgaagatttgggcaag
atggagttcgatgaagagatcaagaaaaggttcaagatggtttatgtgccgaactggttt
tcggtggatctgaagacagggatgctgacgataacgctggacgagagcgactgctttgca
gcatgggtttctgctaaagacgctggattcaccagccctgacggatccgaccctaaactg
aatctgggcgggctgctgcttcaggctctgctggagtattggcctcgaacacacatcaac
cccatggacgaggagaccgaactgaatcatgggagtgtgaacggcgaacacgagagccgg
atacagaaaggaaacggatatttccaggttccgccacacactccggtgattttcggtgaa
gcgggaggaaggacattattcaggctgctgtgtcgagactcgggtggagaaactgagtcc
atgttactcaacgagacggtcccgcagtgggtcatcgacatcacagtggacaaaaacatg
cccaaattcaacaaaatcccattctacctccagccccattcgtcctctggagcaaaaaca
ttaaagaaggatcgtttgtcggccagtgacatgttacaagtaaggaaggtgatggaacac
gtgtatgaaaagatcatcaacctggacagcgagtcgcagacgggcggttcggccgcggag
aaacccagcgaacagaaagaggaggaagacatggcagtgttagcggaggagaagatcgag
ctgctctgtcaagaccaggttctggatcccaacatggacctgcgaacagtgaagcatttc
atctggaagagcggcggcgacctgacgctccactaccggcagaaatccacgtga

DBGET integrated database retrieval system