Labeo rohita (rohu): 127162609
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Entry
127162609 CDS
T09007
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
Organism
lroh
Labeo rohita (rohu)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
U-box
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
Prok-RING_4
zf-RING_5
DUF1299
PRP9_N
Borrelia_P83
Caudo_TAP
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
127162609
NCBI-ProteinID:
XP_050961364
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MASSSGPLNEELQCSICLDVFTDPVTTPCGHNFCRTCLNKCWTNTQTCFCPFCKETFSRR
PDLKINTTLREVVQHFKEKLNLGRSEVFCDFCDERKQKAVKSCLTCPSSYCETHLEPHHR
VPRLKNHKLINAVENLEDYICQKHQRPLELFCRDDQTRVCLSCTEGDHRNHNTVPIEEES
QQKKNQLIQTQTDVQQMIQNRTKKIQEIQHSVEMRKRNTEKEKSYSVELFTDLIRSTERC
QSELLKMMEEQQKAAEKQAEDLIKELQQEITDLKRRNTELEQLSHTDDHLHLIQMFSCLY
SRPHAKNWTEISVDSDVDVLPMNRALRQFKKTLDETLDEKLNQSELKYVQKFAVDVTLDP
DTANPYLILSDDGKQVSNGDIKQDVPENPNRFDSCSCVLAKQGFISGRFYYEVQVKGKTE
WDLGVARESINRSGEGDLSPEDGYWSVILRNENEYDACESSLVSLSLKVKPEIVGVFVDY
EEGLVSFYDVGHRSHIYSFTGQTFIDKLYPYFSPDLKYEGKNSKPLIITPVKK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctccagtggtccactaaatgaggagctccagtgctccatctgtctggatgtg
ttcactgacccagtcaccactccatgtggacacaacttctgcagaacctgcctgaacaag
tgctggacaaacacacagacctgcttctgtccattctgtaaagaaacattcagcagaaga
cctgatctcaagattaatacaacactcagagaggttgtgcaacactttaaggagaagctc
aatctaggaagatctgaggttttttgtgacttctgtgatgaaagaaaacagaaagctgtg
aagtcctgcctgacatgtccgagctcttactgtgagactcacctggagcctcatcacaga
gtcccacgtctaaagaaccacaaactgatcaatgctgtggaaaatctggaggattatata
tgccagaaacaccagagacctctggagctgttctgcagagatgatcagacgcgtgtgtgt
ctgtcctgcactgaaggagaccacaggaaccacaacactgttcctatagaggaggagagt
caacagaagaagaatcagctgattcagacacagacagacgtgcagcagatgatccagaac
agaacgaagaagattcaggagatccagcactcagtagagatgagaaagagaaacacagag
aaagagaaatcatacagtgttgagctcttcactgatctgatccgctccactgagagatgt
cagtctgagctgctgaagatgatggaggaacagcagaaagcagcagagaaacaggctgaa
gatctcattaaagagctgcagcaggaaatcactgatctgaagaggagaaacactgagctg
gagcagctctcacacactgacgatcatctgcacctcatacagatgttctcatgcctgtac
agtcgtccacacgccaagaactggactgagatcagtgttgactctgatgtggatgtgctc
cctatgaacagagctttgcgtcagtttaagaaaactcttgatgaaactctagatgaaaaa
ctcaatcagtctgagttgaagtatgtacagaagtttgcagtggatgtgactctggatcct
gatacagcgaatccatatctcatcctgtctgatgatggaaaacaagtcagtaatggagac
attaagcaggacgtcccagaaaacccaaacagatttgactcttgttcttgtgtcctggca
aagcagggtttcatttcagggagattttactatgaggtgcaggtgaagggaaagactgag
tgggatttaggagtggccagagaatccattaacaggagtggggagggtgacctgagtcct
gaggatggatactggtctgtgattctgaggaatgagaatgaatatgatgcttgtgaaagt
tcactcgtctctttatctctgaaagtgaaacctgagattgtgggagtgtttgtggattat
gaggagggtttggtctctttttatgatgtgggacacagatctcatatctactctttcact
ggtcagactttcattgacaaactctatccatactttagcccagaccttaaatatgaaggt
aaaaactcaaagccactgatcatcacacctgttaagaaataa
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