Labeo rohita (rohu): 127164668
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Entry
127164668 CDS
T09007
Symbol
rusc2
Name
(RefSeq) LOW QUALITY PROTEIN: AP-4 complex accessory subunit RUSC2
KO
K23291
iporin
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127164668 (rusc2)
Membrane trafficking [BR:
lroh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
127164668 (rusc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
SH3_9
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
127164668
NCBI-ProteinID:
XP_050964615
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All DBs
Position
5:complement(35685681..35709713)
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AA seq
1644 aa
AA seq
DB search
MDSPPKLAGETLIVHHIPLVHCQVSSSRQCCGSPLKRNSNPFSCPENLGLSRTTSLPERD
ILQREALVYSSLIQTSSSSLSSSDTFGDGGMRGEKRGRGGRDGSMASDTSSFTSSNSEDQ
AQGLLMKTRERPRRNPFLLNTEDEDDEDEDNLNGYLEDSSFHLHGNSHEISNASLANEDL
PPFHLHDLGFTAEPFLLHGSTEKQWGSTNGPRGEAESRGHTIGGTFDLSTHMEGLNLLRL
DSQRRHGSSGSTLSMDCGEQEWGEDDDYEDHSMQGGRGSSECSSLAAPHCSCCGLSQPYP
EPFHESFSECHQGYGSDSSCNSSDGVLVNFSTIYNKMNNVVPAKQSLNINSSAEQSCASS
VSELIGMCGTECSSGRGAFYLDLHTSPIEPPQHPSATQELAISSSVSQPQGATLELDANC
NSYHNLLGSEGLSSAETSANELTSCLQSQARLVVATQNYYKLVTCDLSSQSSPSPAGSSV
TSCSDEHSKGSPTQPTEYYLFQQMKEDEEEEDAENDENDPSEIDSTRENVIEGQVYINIS
PPMTACNSIGASGSGRPRSRSYDRNLDKSPSPRLGSLERMLSCPVRLSESAAPSPPPPPR
VTSFAEIARNKRRTGGSPSQKNGMEATSMHSHSSGEFSPIMEDLSKGQSHSLPPLTRCHS
QGSCDLSSPHRPRSTPLRESPGGAGKQPRTKAEGGLSISTDSSPVVIRYSKDQRPTSLPI
QPFTFQHQFGKTQTKPILPLLDGYISHMQARGAAAAEGGEDDSEEDRRPPHGPSNVPTTV
RPSPLGSYSPVRLQGAPTSSGTCSTCTPTPGGPRPPRSLSCPISAGLLPQHTPPGMAIRT
ETPKLAPLPPTPPPPPLMKQSPLMPALPTRNHCFHRGNLPTLPSSGLSPLGQLEPAPQEE
PVKVLPACVTQRQPNVHHLSPQALKWREYRRKNPLGVERGKDGPHSFSCALETKRPGARV
MRRNVFDFPPTSQTLSFGRLNGQSLRQLPQYYSDFLPEYFSQTERPPEEFCLSPDANTDE
SISIDLLQKRGLVKAINTAVDLIVAHFGTSRDAGVKAKLGNSSVSPNVGHLILKYLCPAI
REILHDGLKAYVLDLIIGQRKNQPWSVVEASTQLGPSTRVLHSLFSKVNQYSELTNHSMR
LNAFIFGLLNLRSLEFWFNHIYTHEDIIAAHYHPWGFLPLSQGACQPLFEELLLLLQPLS
LLPFDLDLLFEPHQLQKGEEHLRRKEQLCSARQGLDQSDRSTFQLMRGCGMLESGAQEVG
MLPQRERFTLRDEDSQLRTEGVTLKMKCDRRRSAGAERESQDKEAGVGKECLRKSDTGHI
DGGGWCAARMKGVGEDCEKEKRRERDGDGAKQKNRQAGWWYQLMQSSQVYIDNSTEGSKF
VKWEKRRKGGIESHRQSLPPAREGVVEGAEAIQQVDEQVEHGRTSSSNINSIGNGVLHHS
ALSEPTKVAKGKPSWMGSPPESVLTELKKSKEKQPDCQDAYEGVQAQPGAGEDGSAQVLR
WGRLFGAGNANKVEKSEQKSVRKQRLPSGWLSLDRSVLDLVAQSVGVGKRAEQQSLTTQS
QESHLGPTEQAQTQNPQTQRQALREVKALCHHIATEPGQLSFHKGDVLQVLSRADSDWLL
CALGDSQGLVPIIYVTLIEDSQER
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atggacagtccacctaagctagccggggagactcttattgtccaccacattccgctggtt
cactgccaggtttcgagctcaagacagtgctgtggtagtccactgaaaaggaacagcaac
cctttcagctgtcctgagaatcttggattgagccggactacctccctacctgagagagac
attcttcaacgggaggcgttggtgtacagtagcctcatacagacatcgagcagcagcctt
agctctagtgatacttttggcgatggaggaatgagaggggagaaacgggggagaggaggg
cgagatgggagtatggcaagcgatacttcctctttcacctcaagcaattctgaagatcag
gctcaaggcctgctgatgaagacacgtgaacgtccaagacgtaacccgtttctgctcaac
actgaagatgaagatgacgaggatgaagacaatctgaatggatatttggaagattcctct
tttcacctgcatggaaactcgcatgaaatctcaaacgcatcacttgcaaatgaagacttg
ccaccgttccacctgcatgaccttgggttcacagctgaaccttttctcctgcatgggtct
acagaaaaacagtggggttccacaaatgggcctcgtggggaagcagagagcagaggccac
acaataggtgggactttcgatttgtctactcacatggagggcctgaacttgctgagatta
gatagccagaggcgccacggaagcagtggttccaccctttcaatggactgtggtgagcaa
gaatggggtgaggacgatgattatgaagaccactccatgcagggcggcagaggaagctca
gagtgttccagtcttgcagcaccacattgttcctgttgtggcctttctcagccataccct
gagccttttcacgaatcattttctgagtgtcaccagggctatggcagtgattcctcctgc
aatagctcggatggagtgctggttaacttcagcacaatctacaacaagatgaacaatgtt
gtcccggccaaacagtcactcaatatcaacagttccgccgagcagtcctgtgcctcatct
gtgtctgaactcattgggatgtgcggaacagaatgtagcagcggacgcggagctttctac
ctggacttacacacctccccgatcgagccccctcagcatccttcggccactcaagaactt
gcaatctcttcttctgtatctcagccacaaggtgccactttggaactagatgccaactgt
aactcataccacaaccttcttggaagcgagggactgtcctcggctgaaacctctgccaat
gaactcacctcgtgtcttcaaagccaagctcgcttggttgtagcaacgcagaattactac
aagcttgtgacgtgtgacctttcttcccagtcctctcccagtccagcgggatcatcagtt
acaagctgctcagatgagcacagcaaaggaagtcccactcagccaacagagtactaccta
ttccaacaaatgaaagaggacgaagaagaggaagatgcagagaatgacgaaaacgatcca
agtgagattgactctacccgtgagaatgtaatcgaggggcaggtgtatatcaacatctcc
ccacctatgacagcctgcaattcaattggtgcttcggggagcggtcgacctcgttctcgt
agctacgatcggaacttggacaagtctccgtctcctcgccttggatccttggagcgcatg
ctcagctgccctgttcggctcagtgagagtgcagcccctagcccgccacctccaccacgt
gtcacttcttttgcggaaatagcgaggaataagaggagaactggagggtcgccatcacag
aagaatgggatggaggccacgtccatgcactctcactcgtctggagagttttcacccatc
atggaagacctttcaaagggtcagagccacagtttgccaccacttactcgatgccatagt
caagggagctgtgatttgtcctccccgcatagaccacggagcacaccacttcgggaatca
ccagggggagcgggaaaacagcctcgaactaaggcagaaggtggcctgtctatctccaca
gactcctctccagttgtaattcgctatagcaaagatcaacgtccgacctcattacccatt
cagcctttcactttccagcaccagtttggtaaaacccagacgaagcctatccttcctctt
ttggacggatacatcagccatatgcaggctcgaggggctgcagcggctgagggaggtgaa
gatgactcggaagaagatcgcaggccacctcatggcccctccaacgtacctacaacagta
cggccgtccccactggggagctactccccagttcgcctccaaggtgcacccacctcttct
ggaacctgttcgacatgcactccaaccccgggtggtccaaggccaccgcgttccctttct
tgccccatctctgcaggtctcctgcctcagcataccccacctggaatggccatacgtaca
gagactcctaaacttgctcccttacctccaactccgcctccacctccgctgatgaagcag
agtccgctgatgcctgcattgcccactagaaatcactgtttccaccgtggcaatttgccg
acgcttcccagttctggactcagtcctcttggacagttggaaccagcgccacaggaggag
ccagtgaaggttttaccagcatgtgtgacacagcgacagcctaatgtgcaccacctctcc
ccgcaggcactcaaatggagagagtacaggcgcaagaaccctcttggtgtggagcgtggt
aaagacggccctcattctttttcttgtgctttggaaaccaagagacctggagctcgtgtc
atgcggcgcaatgtgtttgatttccctcccaccagtcaaacactcagcttcggcagactg
aatggtcagtctttgaggcaacttccgcagtactacagcgacttcctgcctgaatatttc
tctcagacagagcgccccccagaggaattctgcttatctcctgacgctaatactgatgaa
tccatctctatagacctgttgcagaagcgaggtttggtgaaggccataaacacagcagtg
gatctgatcgtggctcattttggcaccagccgggatgcaggagtaaaggccaaattgggc
aatagctctgtaagtccgaatgtgggtcaccttattctaaagtacttgtgtcctgccatt
cgtgaaatactgcatgatggactgaaagcatatgtactggacctgatcatcgggcaacgt
aaaaaccagccctggagtgtggtggaggcctccacacaactcggtccctctacacgggtt
ttgcacagtctgttttctaaagtcaatcagtattctgagctgaccaatcacagtatgaga
ctcaatgccttcatcttcggcctgctaaacttgcgctctctggaattctggttcaatcac
atttatacacatgaagacattatagcagcccactaccatccatggggtttcctacccctg
tctcaaggggcctgccagccactgtttgaagagttgctgctcctccttcagccgctctca
ctgttgccctttgaccttgacctgctatttgagccacaccaactacaaaaaggggaagaa
cacctgagacgcaaagaacagctgtgctctgctcgccaaggcctcgaccaatcagatcgc
tccacttttcagctcatgcgaggttgtggaatgttggagtctggagcacaggaagtggga
atgctgcctcagagagaaaggttcacgttgagagatgaggacagccagcttaggacggag
ggagtgacattaaaaatgaaatgcgatcggcggaggagtgcaggagctgagcgtgaatca
caggataaggaggctggagttggcaaagagtgtttgagaaagagtgacacaggacatata
gatggtggcgggtggtgtgctgccaggatgaagggagttggagaagactgtgagaaggag
aaaaggagagaaagagatggagatggagccaaacagaaaaacagacaagctggctggtgg
taccagctgatgcaaagctcacaggtttacattgacaactccaccgagggctcaaaattt
gtgaagtgggagaagaggaggaaaggtggcatcgagagccaccggcaaagccttccacct
gctagagaaggtgtggttgagggggccgaggccattcagcaggtggatgaacaggtggaa
catggccggaccagcagtagcaatattaatagcattggcaatggtgttctccaccactca
gcattgtcagaacccaccaaagttgcaaaagggaagccatcgtggatgggaagtccaccg
gaatcagtgctcactgagctgaagaagagtaaggagaagcagccagactgccaggatgcc
tatgaaggggttcaggcccagccaggagcaggggaggatgggtcggcacaggtgctccgc
tggggtcggctgtttggagctggaaatgcaaacaaggttgagaagagcgagcagaaatca
gtcaggaaacaaagattgccatctggttggttgagtctcgaccgttccgtgttggatctg
gtggctcagtctgttggagtggggaaaagagcggagcaacaatctctcacaactcaaagc
caagaatcccaccttggcccaactgaacaagcacaaacacagaatccacaaacacagaga
caagctctacgtgaggtgaaggcgttatgccatcatattgccacagagccagggcagctc
agtttccacaaaggtgacgtgctgcaggtgctcagcagggcagactctgattggctgctg
tgtgctctgggcgacagccaaggccttgttcccatcatatacgtcaccttgattgaggac
agtcaggagcgttaa
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