Labeo rohita (rohu): 127166873
Help
Entry
127166873 CDS
T09007
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127166873 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127166873 (usp4)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127166873 (usp4)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127166873 (usp4)
Ubiquitin system [BR:
lroh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127166873 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
DUF1609
Tax
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
127166873
NCBI-ProteinID:
XP_050968459
LinkDB
All DBs
Position
6:complement(26364656..26380564)
Genome browser
AA seq
1009 aa
AA seq
DB search
MAEGGGPESGNASDPDEKPVITQTPVPSTESQKQSIGTLLKTPLRKGDEWYLIDSRWFKQ
WKKYVGFDSWDLYNVGEHNLYPGPIDNSGLFSDHEAQTLKEHLIDELDYVLVPTEAWNKL
VSWYGCLEGQKPIIRKVVEHGMFVKHCKVEVYLLELNLCENDNMDKVVTRHFSKADTIDT
IEKEMRSLFDIPSEKETRLWNKYMSNTYEQLNKLDSTVQDAGLFQGQVLVIEKKNEDGTW
PRQTCHSKSSTSTSRNYTTSPKLSSNSSATISSTITNGDSNSNSSYMLNNSTSGNRLGSY
NSYSSSYSYRESAAQPGLCGLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRYEAEINREN
PLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLD
GLHEDLNRVKKKPYLALRDAEGRPDEIVAKEAWANHRLRNDSIIVDIFHGLFKSTLVCPE
CSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRTDPQFRPMQYRVVVPKMGVVADLCSALA
KLSGVPSENMIVADVYNHRFHKIYKRDDGLNHIMEKDDIFIYEVLEEDSEKMNLPVYFRE
RHAKHSGGSSSTMLFGQPLLITVPRHNLTVDTLYERVLERIGRYVKRSQGTITDSRASAS
ATSSSSSQSPECLASVSSHSTGLSGCSSPVSDGASCSAGSNSSNHSGTCNGPNGVCDGDE
EAMDHQESPEPENSHSDTVDGEEDSEPENGPNSSSGKSFTSRPKLFSFSMVNSYGTANIS
SLPFDGNLLKLTTHSTVAIDWDSDTKKLCYDDQEAEAYDKHESMLHAQKKKTTVALRECI
ELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVV
DFPIRDLNMSEFVCDPKADPYVYDLIAVSNHYGGMGGGHYTAYGKNKMDGKWYYFDDSSV
SSATEDQIVTKAAYVLFYQRRDADTPSKSTPSASLGGAPETLDDHMDTN
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggaggcggacccgagtcgggtaacgcttcggaccctgacgagaagccggtg
atcacacagacaccagtaccgtccaccgaaagtcaaaagcagagcatcggcacactgctg
aaaacgccacttcgaaagggagacgagtggtatttgattgacagccggtggttcaaacag
tggaagaaatatgtgggctttgacagctgggatttgtacaatgttggagagcacaatcta
tacccgggacccattgataactctgggctcttttcagatcatgaggcccagacgttgaaa
gagcatctcatagatgagttagactatgttttagtgcctacagaggcctggaataaactg
gtcagctggtatggctgtttggagggtcagaaacccatcatcagaaaggttgttgaacat
ggaatgtttgtgaagcactgtaaagtggaagtgtatttgcttgagttgaacctgtgtgaa
aacgacaacatggacaaagttgtcacccgccatttcagcaaagcagacactatagatact
attgaaaaggagatgaggtctttatttgatatcccatctgaaaaggaaacccgactctgg
aataaatatatgagtaacacttatgaacaacttaacaagcttgacagcactgtacaggac
gcagggctttttcagggccaggttcttgttatagagaagaagaatgaggatggcacatgg
cccagacagacctgccattccaagtccagtacttccacctctcggaattatacaacctcc
ccaaaactctcttcaaactcatctgccaccatatcctccactataacaaatggggatagc
aatagcaactctagctacatgctgaacaacagtacttctggcaacagattgggaagttac
aactcctacagctcctcttacagttacagagaatctgccgctcaaccaggcctctgtggt
ctgagcaacctgggcaacacctgcttcatgaactctgcccttcagtgcctgagcaacact
ccccctctaacggaatatttcctggaggaccggtacgaagcggagatcaaccgggaaaat
ccattagggatgcgaggggagattgcagaggcctacgcagatctggtcaaacagatgtgg
cttagtcggagcagctatgtggctccacgcacttttaaaacccaggtgggtcgttttgcc
ccgcagttctcaggataccagcaacaagactctcaggagctgctggcctttctgctggac
ggcctacatgaggaccttaaccgtgttaagaaaaagccttatctggccctgagagatgct
gagggacggcctgatgagattgtagccaaggaagcctgggcgaatcaccggttgcggaac
gattccataatcgtggacatcttccatggcttgttcaaatctacgctggtttgcccagag
tgctccaaagtttcagttacctttgaccccttctgctacctcacgctgcccctgcccatg
aaaaaggatcgcactatggaggtgttcctggtccgcactgacccacagtttagacccatg
caatatcgtgtagttgttcccaaaatgggtgtagtggcagacctgtgcagcgctttggcc
aagctgtctggagttccttcagaaaatatgattgtggcagatgtttacaatcacagattc
cacaaaatctacaaacgggatgacggtctcaatcacatcatggaaaaggatgacattttt
atttatgaggtgttagaggaagatagtgagaagatgaacctgccagtgtactttagagag
aggcatgccaagcacagtggaggctcttcgagcacaatgcttttcggccagcctcttctc
atcacagtcccgcgccacaacctcaccgtggataccctctatgagcgcgtgcttgagagg
atcgggcgttacgttaaacgttcacagggtaccattactgacagtagagcatctgcttcg
gccacatcctctagcagcagccaatcaccagaatgcctcgcttcagtgtcaagtcacagc
acagggctgagtggctgcagcagcccagtttcagatggagcttcctgcagcgctggatcc
aacagcagcaaccactctggaacctgcaacggccccaatggagtttgcgatggtgatgag
gaagccatggatcaccaggagagtccagaaccagagaacagccactcagacactgtggat
ggagaggaggattcagaaccagagaatgggcccaatagcagcagtggaaaatcttttact
tctcggccaaaactcttttctttcagcatggtcaactcctatggcacagcaaacatcagt
tctctcccatttgatggcaatctcttaaagctcacaactcactctacagtagccattgat
tgggactcggacacaaagaaattgtgctacgatgaccaggaggctgaggcctatgacaaa
catgagagcatgctacatgctcagaagaagaagaccacagtagctttacgagaatgcatc
gagctctttactacaatggagaccctaggagaacacgacccctggtactgccccacgtgt
aagaaacaccagcaggccacgaagaagtttgacctgtggtctctcccgcgcattctggtt
gtacatctgaagcgcttctcttacaaccgctgctggagagacaagctcgatactgttgta
gactttccaattagggacttgaacatgtcagagtttgtttgtgaccccaaagctgaccca
tacgtctatgacctcattgctgtttccaaccattatggaggaatgggtggaggccactac
acggcgtacggcaagaacaagatggatggaaaatggtattactttgacgacagcagcgtg
tcgtctgcaaccgaggatcagattgtgactaaagcagcctacgtgctcttttaccaacgc
agagatgcggacacgccgtccaaatctaccccctccgcatcactaggaggagctccagag
accctggacgaccacatggacaccaactga
DBGET
integrated database retrieval system
