Labeo rohita (rohu): 127167979
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Entry
127167979 CDS
T09007
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00310
Lysine degradation
lroh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127167979 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127167979 (setdb2)
Enzymes [BR:
lroh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
127167979 (setdb2)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127167979 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
127167979 (setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pre-SET
SET
MBD
Motif
Other DBs
NCBI-GeneID:
127167979
NCBI-ProteinID:
XP_050970385
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All DBs
Position
1:50139290..50149968
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AA seq
609 aa
AA seq
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MMECEIERAKSFWEDVKVDKVFDDVLKVLNHLRNVIRRNMATDREYVQAMKIVLESELDV
LNNEGIQAVLIDEDILTVTVSESQCSPESLRNGVDTEDFLQRDVSRLCRDVESSSDHSQT
SLAGRAEAVGVPELLLSPLSFCSEEPKSPVQLVYRPHDCSAACVPTLPAHADRFLGHNPL
RVPMLCQFQRQCTCARDDECDALDADVLYKAPCGRSLCSMEEVLHFLLRSDSLGVLQPDN
FSFNPQVVPENQARAPAAAAPLFERDLSRGIEPVPVSLFNELDATRPKEFRYRKERWPHG
CFLSAAPFFSVCCDCTDGCADARSCACVRWTLGDAGEHRGYRQQRLSAPVSAGLFECGPW
CGCERSRCQNRVVQKGLRVRLQVFRTQERGWAVRCRDDLDRGTFICIYAGVVLRLQQSVE
EPPEPRGREPPVSDDEVEVVEEWTLPAGPNEPLEPLEPLELLDCSPPLYVPVIQRPADQT
PHAQLKDQQQSGASSLDCSENGNEEIVSKKPRLTDSNGHDAQITKHSPHKHKLEQMYYLD
ASKEGNVARFINHSFEPNLFIQNVFTDTHDPQFPLIAFFTNRSVKAGTELTWNCSSAAGS
ERDRDRVTV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtgtgaaatcgagcgggcgaagagcttctgggaggacgtgaaagtggataaa
gtgtttgatgatgtgctgaaggtgcttaatcacttaagaaacgtcatcagacgcaacatg
gctactgacagagagtacgttcaggccatgaagatcgttctggagtctgaactcgatgtc
ctgaacaacgaaggcattcaggcggtgctgattgatgaagacatactgacagtgaccgta
tcagagtctcagtgttctccggagagcctgaggaacggtgtggacacggaggactttctg
cagagagacgtctcacgactgtgcagggacgtggagtcgagctccgatcacagccagacg
tctttagcgggtcgagccgaggccgtgggcgtcccggagctgctgctgtctcctctgagc
ttctgttccgaagagcccaagtctccggtgcagctcgtctaccgtcctcacgactgcagc
gccgcctgcgtcccgacgctgcccgctcacgccgaccgctttctgggtcacaaccctctg
cgcgtgcccatgctgtgccagttccagcggcagtgcacgtgcgcgcgagacgacgagtgc
gacgcgctggacgccgacgtgctgtacaaggcgccgtgtgggcggagcctgtgctccatg
gaggaggtgcttcacttcctgctgcggtcggacagtctgggcgtgttgcagccggacaac
ttcagcttcaacccgcaggtcgttccagaaaaccaggcgcgagctccggccgccgcggcg
ccgctgttcgagcgagacctcagccgaggcatcgagcccgttcccgtctctctgttcaac
gagctggacgcgacgcggcccaaagagttccgctaccgtaaagagcgctggccgcacggc
tgcttcctcagcgccgcgccgtttttctcagtgtgctgcgactgcacggacggctgcgca
gacgcgcggagctgcgcgtgcgttcggtggacgctcggagacgcaggagagcatcgtggg
tacagacagcagcggctgagcgcgcccgtgagcgcagggttgttcgagtgcggcccgtgg
tgcggctgcgagaggagccgctgtcagaaccgtgtggtgcagaagggtctgcgcgtgcgg
ctgcaggtgtttcgtacgcaggagcgcggctgggccgtgcgctgcagagacgacctcgac
cggggaaccttcatctgcatttacgcaggcgtggttctccgactgcagcagagcgtggag
gagccgccggagccccgcggccgagagccgcccgtgtccgatgacgaggtggaggtggtg
gaggagtggacgcttcccgccggaccgaacgagccgctggagccgctggagccgctggag
ctgctggactgctctccgccgctgtacgtgcctgtgatccagagacccgccgaccagact
ccacacgctcagctcaaggatcagcagcagagcggcgcctcgtctctggactgcagcgag
aacgggaacgaggagatcgtgagtaagaaacccagactaaccgattcaaacggacacgac
gctcagatcacgaaacattcgccgcacaaacacaaactagagcagatgtattacctggac
gcctcgaaagaaggaaacgtggcccgattcatcaaccacagctttgagccaaacctcttc
atccagaacgtgttcaccgacacacacgacccgcagttcccgctcatcgccttcttcact
aacaggtctgttaaagcaggaactgaactgacctggaactgctcgtccgcagcaggaagt
gagcgtgatcgtgatcgtgtgacggtctga
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